Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 3.4e-110 401.7 211 100.0
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 1.4e-36 157.1 220 49.1
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 2.7e-35 152.9 213 44.6
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.5e-33 146.4 214 44.9
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 8.2e-32 141.4 223 46.6
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.5e-28 129.8 187 46.0
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 5.5e-28 128.6 205 42.9
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.6e-27 127.1 219 42.0
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 2.7e-27 126.3 222 44.1
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 3.9e-26 122.5 177 45.2
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 5.1e-26 122.1 212 42.5
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 5.1e-26 122.1 216 41.7
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 6.7e-26 121.7 209 41.6
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 1.5e-25 120.6 218 43.1
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 2.6e-25 119.8 194 44.8
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 2.6e-25 119.8 212 43.4
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 4.4e-25 119.0 211 41.2
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 1.3e-24 117.5 215 40.9
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 2.2e-24 116.7 215 40.5
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 2.8e-24 116.3 170 40.6
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 4.8e-24 115.5 170 41.2
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 6.3e-24 115.2 235 41.3
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 8.2e-24 114.8 170 41.2
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 1.8e-23 113.6 215 40.0
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 2.4e-23 113.2 228 40.8
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 7.0e-23 111.7 211 38.4
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 7.0e-23 111.7 215 38.6
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 1.5e-22 110.5 218 40.4
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 2.6e-22 109.8 230 41.3
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 3.5e-22 109.4 212 37.3
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 4.5e-22 109.0 144 45.8
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 5.9e-22 108.6 170 42.9
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.0e-21 107.8 177 44.1
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 1.0e-21 107.8 222 36.0
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 1.7e-21 107.1 203 38.4
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 2.2e-21 106.7 223 35.4
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 5.0e-21 105.5 215 37.2
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 5.0e-21 105.5 201 38.3
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 6.5e-21 105.1 208 38.5
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 8.5e-21 104.8 175 40.0
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 2.5e-20 103.2 143 44.1
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 2.5e-20 103.2 123 50.4
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 3.2e-20 102.8 217 36.9
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 3.2e-20 102.8 211 37.0
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 9.4e-20 101.3 174 41.4
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 2.7e-19 99.8 191 39.8
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 4.7e-19 99.0 213 34.7
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 6.1e-19 98.6 170 36.5
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 8.0e-19 98.2 208 38.0
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 1.0e-18 97.8 217 35.9
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 1.4e-18 97.4 178 39.3
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 1.4e-18 97.4 161 40.4
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 3.0e-18 96.3 141 43.3
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 4.0e-18 95.9 186 38.7
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 5.2e-18 95.5 221 36.2
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 2.6e-17 93.2 118 46.6
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 4.4e-17 92.4 212 33.5
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 4.4e-17 92.4 208 40.4
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 1.3e-16 90.9 221 35.3
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 2.8e-16 89.7 209 35.4
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 2.8e-16 89.7 219 34.7
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 2.8e-16 89.7 104 48.1
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 3.7e-16 89.4 104 47.1
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 4.8e-16 89.0 167 37.7
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 4.1e-15 85.9 171 36.8
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 7.0e-15 85.1 216 32.9
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 2.6e-14 83.2 130 38.5
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 3.5e-14 82.8 138 39.1
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 4.5e-14 82.4 134 43.3
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 4.5e-14 82.4 204 36.3
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 5.9e-14 82.0 125 39.2
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 1.0e-13 81.3 168 37.5
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 2.9e-13 79.7 187 34.8
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 7.2e-12 75.1 159 35.8
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 9.4e-12 74.7 123 38.2
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 9.4e-12 74.7 110 45.5
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 1.2e-11 74.3 122 36.1
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 2.7e-11 73.2 128 38.3
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 2.7e-11 73.2 108 42.6
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 2.7e-11 73.2 192 33.9
Gorai.005G224000 Gossypium raimondii HOM05D007310 ORTHO05D002375 8.0e-11 71.6 204 35.3
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 1.4e-10 70.9 117 40.2
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 1.8e-10 70.5 113 38.9
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 1.8e-10 70.5 224 28.6
Zm00001eb081280 Zea mays HOM05D021312 ORTHO05D012887 2.3e-10 70.1 117 34.2
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 8.8e-10 68.2 92 47.8
Os04g0450600 Oryza sativa ssp. japonica HOM05D021312 ORTHO05D012887 8.8e-10 68.2 116 37.1
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.2e-09 67.8 69 56.5
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 2.0e-09 67.0 123 35.0
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 2.0e-09 67.0 123 35.0
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 3.4e-09 66.2 120 38.3
CsaV3_7G006790 Cucumis sativus L. HOM05D007310 ORTHO05D002375 1.3e-08 64.3 124 37.9
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 1.7e-08 63.9 122 32.0
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.7e-08 63.9 80 52.5
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 2.2e-08 63.5 122 32.8
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 2.8e-08 63.2 188 31.4
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.1e-07 59.7 116 34.5
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 5.4e-07 58.9 223 27.4
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 9.1e-07 58.2 116 36.2
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 9.1e-07 58.2 125 32.8
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.6e-06 57.4 115 33.9
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 2.0e-06 57.0 122 34.4
Os09g0468900 Oryza sativa ssp. japonica HOM05D026744 ORTHO05D012887 3.5e-06 56.2 150 30.7
Os08g0483600 Oryza sativa ssp. japonica HOM05D026744 ORTHO05D012887 4.5e-06 55.8 116 33.6
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 7.7e-06 55.1 141 29.8


User provided reference genes

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