Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 2.6e-275 951.4 476 100.0
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 2.2e-197 692.6 467 75.2
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 1.4e-188 663.3 471 72.2
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 1.1e-185 653.7 452 74.1
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 1.4e-183 646.7 470 71.3
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 1.3e-181 640.2 427 76.3
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 1.3e-181 640.2 459 71.9
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 2.2e-181 639.4 451 72.9
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 5.9e-179 631.3 473 70.8
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 1.5e-177 626.7 446 70.9
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 2.1e-176 622.9 427 75.9
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 1.0e-175 620.5 458 68.8
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 1.4e-175 620.2 463 70.4
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 9.1e-172 607.4 475 65.9
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 1.2e-171 607.1 433 70.9
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 1.7e-170 603.2 477 65.6
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 6.5e-170 601.3 479 65.8
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 4.2e-169 598.6 479 68.1
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 6.1e-168 594.7 462 65.4
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 1.0e-167 594.0 444 68.9
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 2.3e-167 592.8 444 67.8
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 7.0e-164 581.3 438 67.8
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 1.0e-162 577.4 454 67.0
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 1.7e-162 576.6 445 65.6
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 5.0e-162 575.1 445 65.8
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 6.1e-160 568.2 441 68.0
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 2.3e-159 566.2 466 64.4
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 3.7e-157 558.9 385 75.8
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 3.3e-153 545.8 429 65.3
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 5.4e-148 528.5 465 61.9
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 6.4e-141 505.0 437 60.9
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 5.4e-140 501.9 374 66.6
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 1.2e-139 500.7 442 57.9
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 1.6e-131 473.8 426 59.4
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 2.1e-131 473.4 423 57.4
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 1.3e-130 470.7 424 56.6
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.7e-130 470.3 353 66.0
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 7.3e-129 464.9 425 57.2
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 8.9e-127 458.0 463 54.6
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 7.8e-123 444.9 421 60.3
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 1.5e-121 440.7 340 65.9
Lj1A831T70 Lonicera japonica HOM05D008293 ORTHO05D010504 4.5e-102 375.9 263 73.0
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 7.1e-100 368.6 425 46.6
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 4.3e-97 359.4 341 58.9
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 2.8e-96 356.7 429 46.6
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 5.7e-89 332.4 286 59.8
Cpa.g.sc97.100 Carica papaya HOM05D008293 ORTHO05D010504 1.3e-82 311.2 202 76.2
RcHm_v2.0_Chr7g0194341 Rosa chinensis HOM05D008293 ORTHO05D010504 6.5e-69 265.8 236 63.1
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 4.4e-65 253.1 187 71.7
RcHm_v2.0_Chr5g0031411 Rosa chinensis HOM05D008293 ORTHO05D010504 1.6e-62 244.6 221 59.3
Lj1P831T51 Lonicera japonica HOM05D008293 ORTHO05D010504 6.3e-56 222.6 168 70.2
Cfa019577 Carpinus fangiana HOM05D008293 ORTHO05D010504 2.0e-54 217.6 178 67.4
Solyc07g062547.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 5.5e-52 209.5 149 70.5
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 1.5e-49 201.4 244 48.0
AagrBONN_evm.TU.Sc2ySwM_344.893 Anthoceros agrestis HOM05D008293 ORTHO05D010504 1.2e-41 175.3 144 61.1
MD10G1199100 Malus domestica HOM05D008293 ORTHO05D010504 1.5e-41 174.9 171 56.7
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 6.8e-34 149.4 137 54.0
Actinidia35215 Actinidia chinensis HOM05D008293 ORTHO05D010504 1.5e-28 131.7 291 36.8
Ca_29048_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 1.9e-15 88.2 102 43.1
Sopen06g001050 Solanum pennellii HOM05D008293 ORTHO05D023155 2.5e-12 77.8 85 50.6
SEGI_40959 Sequoiadendron giganteum HOM05D008293 ORTHO05D386060 2.8e-11 74.3 59 59.3
RcHm_v2.0_Chr5g0030641 Rosa chinensis HOM05D008293 ORTHO05D010504 2.0e-09 68.2 67 50.7


User provided reference genes

Program Settings