Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013049001 Vitis vinifera HOM05D006076 ORTHO05D007506 1.5e-208 729.2 352 100.0
Dinv19079 Davidia involucrata HOM05D006076 ORTHO05D007506 1.7e-154 549.7 361 73.1
CiPaw.11G066500 Carya illinoinensis HOM05D006076 ORTHO05D007506 6.6e-151 537.7 357 72.5
Thecc.04G060400 Theobroma cacao HOM05D006076 ORTHO05D007506 1.4e-148 530.0 359 69.6
Rhsim10G0185200 Rhododendron simsii HOM05D006076 ORTHO05D007506 5.2e-148 528.1 363 71.1
CSS0031022 Camellia sinensis var. sinensis HOM05D006076 ORTHO05D007506 7.5e-147 524.2 371 70.4
MD15G1436000 Malus domestica HOM05D006076 ORTHO05D007506 4.1e-145 518.5 363 69.4
TAR629G1722 Trochodendron aralioides HOM05D006076 ORTHO05D007506 4.1e-145 518.5 365 68.5
TWI74G1437 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 1.3e-143 513.5 358 69.6
Lalb_Chr17g0345871 Lupinus albus HOM05D006076 ORTHO05D007506 1.7e-143 513.1 349 70.2
TWI53G1019 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 1.7e-143 513.1 359 69.9
MD08G1242300 Malus domestica HOM05D006076 ORTHO05D007506 2.9e-143 512.3 363 68.6
Ciclev10005246m.g Citrus clementina HOM05D006076 ORTHO05D007506 3.9e-143 511.9 358 70.1
Hma1.2p1_0034F.1_g021380 Hydrangea macrophylla HOM05D006076 ORTHO05D007506 4.3e-142 508.4 361 68.4
Glyma.14G210200 Glycine max HOM05D006076 ORTHO05D007506 9.5e-142 507.3 343 70.8
QL04p075342 Quercus lobata HOM05D006076 ORTHO05D007506 9.5e-142 507.3 353 70.8
COL.COLO4_20049 Corchorus olitorius HOM05D006076 ORTHO05D007506 2.8e-141 505.8 359 67.1
Actinidia17164 Actinidia chinensis HOM05D006076 ORTHO05D007506 4.7e-141 505.0 365 69.0
TPR.G5335 Trifolium pratense HOM05D006076 ORTHO05D007506 8.0e-141 504.2 348 69.5
Psat2g042920 Pisum sativum HOM05D006076 ORTHO05D007506 1.4e-140 503.4 346 70.2
LjContig00141g0009861 Lotus japonicus HOM05D006076 ORTHO05D007506 1.8e-140 503.1 344 70.6
Cc07_g12790 Coffea canephora HOM05D006076 ORTHO05D007506 2.3e-140 502.7 362 68.0
RcHm_v2.0_Chr7g0220631 Rosa chinensis HOM05D006076 ORTHO05D007506 2.3e-140 502.7 363 67.5
Gohir.D11G176000 Gossypium hirsutum HOM05D006076 ORTHO05D007506 5.2e-140 501.5 359 67.4
FvH4_5g28670 Fragaria vesca HOM05D006076 ORTHO05D007506 6.8e-140 501.1 356 68.8
FAN08G1959 Fragaria x ananassa HOM05D006076 ORTHO05D007506 8.9e-140 500.7 363 67.8
Eucgr.J01641 Eucalyptus grandis HOM05D006076 ORTHO05D007506 2.6e-139 499.2 364 64.6
FAN18G0334 Fragaria x ananassa HOM05D006076 ORTHO05D007506 2.6e-139 499.2 356 68.5
Glyma.02G240700 Glycine max HOM05D006076 ORTHO05D007506 3.4e-139 498.8 344 69.8
Ca_05760_v3 Cicer arietinum L. HOM05D006076 ORTHO05D007506 4.4e-139 498.4 345 69.6
Nitab4.5_0002648g0050 Nicotiana tabacum HOM05D006076 ORTHO05D007506 9.8e-139 497.3 360 66.7
FAN04G0499 Fragaria x ananassa HOM05D006076 ORTHO05D007506 2.2e-138 496.1 363 67.8
Manes.01G123200 Manihot esculenta HOM05D006076 ORTHO05D007506 1.1e-137 493.8 359 66.9
PGR042G3996 Punica granatum HOM05D006076 ORTHO05D007506 1.9e-137 493.0 358 66.2
DCAR_003407 Daucus carota HOM05D006076 ORTHO05D007506 2.4e-137 492.7 358 66.2
Nitab4.5_0000005g0100 Nicotiana tabacum HOM05D006076 ORTHO05D007506 2.4e-137 492.7 360 66.1
Phvul.008G241000 Phaseolus vulgaris HOM05D006076 ORTHO05D007506 5.4e-137 491.5 340 68.2
SGA_v2.0_scaffold115G32050 Striga asiatica HOM05D006076 ORTHO05D007506 5.4e-137 491.5 342 68.4
VMungo0647G0600 Vigna mungo HOM05D006076 ORTHO05D007506 2.0e-136 489.6 336 68.2
Medtr5g076920 Medicago truncatula HOM05D006076 ORTHO05D007506 2.7e-136 489.2 358 66.8
arahy.Tifrunner.gnm1.ann1.T03I92 Arachis hypogaea HOM05D006076 ORTHO05D007506 1.3e-135 486.9 348 67.8
arahy.Tifrunner.gnm1.ann1.19NIP2 Arachis hypogaea HOM05D006076 ORTHO05D007506 1.7e-135 486.5 348 67.2
Cfa019426 Carpinus fangiana HOM05D006076 ORTHO05D007506 3.0e-135 485.7 321 71.7
Potri.017G139700 Populus trichocarpa HOM05D006076 ORTHO05D007506 5.0e-135 485.0 356 66.9
MSTRG.15638 Avicennia marina HOM05D006076 ORTHO05D007506 1.1e-134 483.8 356 65.4
THA.LOC104820862 Tarenaya hassleriana HOM05D006076 ORTHO05D007506 1.1e-134 483.8 344 67.2
CANSAT11G2533 Cannabis sativa HOM05D006076 ORTHO05D007506 1.5e-134 483.4 362 65.5
PSO782G3474 Papaver somniferum HOM05D006076 ORTHO05D007506 3.3e-134 482.3 369 64.2
Sabra17G0117900 Salix brachista HOM05D006076 ORTHO05D007506 5.6e-134 481.5 355 66.2
RcHm_v2.0_Chr2g0106631 Rosa chinensis HOM05D006076 ORTHO05D007506 1.2e-133 480.3 362 66.6
Sopen02g011760 Solanum pennellii HOM05D006076 ORTHO05D007506 1.1e-132 477.2 360 63.1
PSO063G3081 Papaver somniferum HOM05D006076 ORTHO05D007506 2.3e-132 476.1 369 63.7
Gorai.007G188600 Gossypium raimondii HOM05D006076 ORTHO05D007506 4.4e-131 471.9 432 55.8
Migut.K00743 Erythranthe guttata HOM05D006076 ORTHO05D007506 1.7e-130 469.9 345 65.2
HanXRQChr16g0532291 Helianthus annuus HOM05D006076 ORTHO05D007506 2.2e-130 469.5 343 65.0
AT5G17290 Arabidopsis thaliana HOM05D006076 ORTHO05D007506 1.1e-129 467.2 343 64.7
Manes.02G080800 Manihot esculenta HOM05D006076 ORTHO05D007506 1.4e-129 466.8 356 65.2
Sc09g0004490 Simmondsia chinensis HOM05D006076 ORTHO05D007506 1.4e-129 466.8 358 63.7
AL6G28370 Arabidopsis lyrata HOM05D006076 ORTHO05D007506 1.9e-129 466.5 343 64.4
Thhalv10014026m.g Eutrema salsugineum HOM05D006076 ORTHO05D007506 1.9e-129 466.5 343 64.4
CARHR195920 Cardamine hirsuta HOM05D006076 ORTHO05D007506 3.2e-129 465.7 343 65.3
BcaC03g18547 Brassica carinata HOM05D006076 ORTHO05D007506 4.1e-129 465.3 340 65.6
A02p04100 Brassica napus HOM05D006076 ORTHO05D007506 5.4e-129 464.9 341 65.7
vmacro20467 Vaccinium macrocarpon HOM05D006076 ORTHO05D007506 7.1e-129 464.5 486 52.9
Solyc02g036380.3 Solanum lycopersicum HOM05D006076 ORTHO05D007506 1.2e-128 463.8 409 56.7
Sp6g26940 Schrenkiella parvula HOM05D006076 ORTHO05D007506 2.7e-128 462.6 344 65.4
BraA02t05373Z Brassica rapa HOM05D006076 ORTHO05D007506 3.5e-128 462.2 341 65.7
EL10Ac4g08929 Beta vulgaris HOM05D006076 ORTHO05D007506 4.6e-128 461.8 358 62.6
C02p08950 Brassica napus HOM05D006076 ORTHO05D007506 1.3e-127 460.3 341 65.4
BolC2t06804H Brassica oleracea HOM05D006076 ORTHO05D007506 1.3e-127 460.3 341 65.4
ClCG05G010470 Citrullus lanatus HOM05D006076 ORTHO05D007506 1.7e-127 459.9 355 65.4
SalBow5G0086 Salvia bowleyana HOM05D006076 ORTHO05D007506 2.3e-127 459.5 356 64.0
SalBow5G5467 Salvia bowleyana HOM05D006076 ORTHO05D007506 2.3e-127 459.5 356 64.0
AUR62004772 Chenopodium quinoa HOM05D006076 ORTHO05D007506 5.1e-127 458.4 354 63.8
Oeu012318.2 Olea europaea HOM05D006076 ORTHO05D007506 6.6e-127 458.0 427 56.0
Aqoxy3G04116 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 1.9e-126 456.4 372 61.3
BcaC04g18810 Brassica carinata HOM05D006076 ORTHO05D007506 2.5e-126 456.1 341 65.1
Carub.0006s1548 Capsella rubella HOM05D006076 ORTHO05D007506 3.3e-126 455.7 344 64.0
Aa31LG11G12390 Aethionema arabicum HOM05D006076 ORTHO05D007506 1.2e-125 453.8 344 63.7
unitig_0.g2639 Utricularia gibba HOM05D006076 ORTHO05D007506 1.2e-125 453.8 354 61.9
BolC9t58826H Brassica oleracea HOM05D006076 ORTHO05D007506 2.8e-125 452.6 341 65.1
BcaB08g36791 Brassica carinata HOM05D006076 ORTHO05D007506 4.7e-125 451.8 340 64.7
Duzib138G0191 Durio zibethinus HOM05D006076 ORTHO05D007506 8.1e-125 451.1 359 62.7
MELO3C019565.2 Cucumis melo HOM05D006076 ORTHO05D007506 2.3e-124 449.5 349 64.5
CAN.G123.2 Capsicum annuum HOM05D006076 ORTHO05D007506 1.2e-123 447.2 343 64.7
Lsat_1_v5_gn_3_67061 Lactuca sativa HOM05D006076 ORTHO05D007506 5.8e-123 444.9 337 64.1
BraA10t44270Z Brassica rapa HOM05D006076 ORTHO05D007506 9.9e-123 444.1 342 64.9
A10p22110 Brassica napus HOM05D006076 ORTHO05D007506 1.3e-122 443.7 342 64.9
CsaV3_3G018020 Cucumis sativus L. HOM05D006076 ORTHO05D007506 1.7e-122 443.4 355 63.4
Lj4A252G57 Lonicera japonica HOM05D006076 ORTHO05D007506 1.3e-119 433.7 321 66.7
C09p59900 Brassica napus HOM05D006076 ORTHO05D007506 6.6e-119 431.4 386 57.8
Solyc06g043140.4 Solanum lycopersicum HOM05D006076 ORTHO05D007506 4.7e-117 425.2 355 60.3
RcHm_v2.0_Chr5g0080521 Rosa chinensis HOM05D006076 ORTHO05D007506 1.4e-116 423.7 302 68.2
Gohir.A11G169800 Gossypium hirsutum HOM05D006076 ORTHO05D007506 1.5e-115 420.2 359 59.6
CDE04G2995 Ceratophyllum demersum HOM05D006076 ORTHO05D007506 7.8e-112 407.9 340 58.2
ECA246G5189 Erigeron canadensis HOM05D006076 ORTHO05D000091 1.5e-110 403.7 332 60.8
ATR0807G042 Amborella trichopoda HOM05D006076 ORTHO05D007506 3.3e-110 402.5 366 56.6
Atru.chr1.2153 Acer truncatum HOM05D006076 ORTHO05D007506 2.6e-107 392.9 268 69.8
Os02g0117800 Oryza sativa ssp. japonica HOM05D006076 ORTHO05D007506 1.7e-106 390.2 365 52.9
Hund22204 Selenicereus undatus HOM05D006076 ORTHO05D007506 2.7e-104 382.9 350 56.6
Sed0003951 Sechium edule HOM05D006076 ORTHO05D007506 4.6e-104 382.1 357 57.1
Peaxi162Scf00294g00628 Petunia axillaris HOM05D006076 ORTHO05D007506 3.3e-102 375.9 353 56.7
SEGI_25199 Sequoiadendron giganteum HOM05D006076 ORTHO05D007506 9.6e-102 374.4 385 49.4
Ah.05g177670 Amaranthus hybridus HOM05D006076 ORTHO05D007506 3.4e-99 365.9 321 57.0
Zm00001eb230080 Zea mays HOM05D006076 ORTHO05D007506 7.6e-99 364.8 356 48.6
Actinidia40417 Actinidia chinensis HOM05D006076 ORTHO05D007506 1.6e-96 357.1 245 70.6
Nn4g24719 Nelumbo nucifera HOM05D006076 ORTHO05D007506 1.6e-96 357.1 301 59.8
MBI06_g30602_MAGBIO Magnolia biondii HOM05D006076 ORTHO05D007506 3.7e-93 345.9 287 59.2
Mapoly0019s0054 Marchantia polymorpha HOM05D006076 ORTHO05D007506 2.4e-92 343.2 419 44.4
Prupe.1G579800 Prunus persica HOM05D006076 ORTHO05D007506 1.9e-89 333.6 209 75.6
AUR62037480 Chenopodium quinoa HOM05D006076 ORTHO05D007506 9.6e-86 321.2 210 71.9
Haze_08537 Corylus avellana HOM05D006076 ORTHO05D007506 1.7e-82 310.5 345 49.6
Pp3c4_11110 Physcomitrium patens HOM05D006076 ORTHO05D007506 2.1e-80 303.5 378 43.1
AagrBONN_evm.TU.Sc2ySwM_344.1639 Anthoceros agrestis HOM05D006076 ORTHO05D007506 4.6e-80 302.4 412 39.8
Cpa.g.sc178.26 Carica papaya HOM05D006076 ORTHO05D007506 5.1e-79 298.9 158 84.2
SMO116G0154 Selaginella moellendorffii HOM05D006076 ORTHO05D007506 4.2e-73 279.3 345 42.3
QL04p075158 Quercus lobata HOM05D006076 ORTHO05D007506 4.6e-72 275.8 228 62.7
TAR629G0059 Trochodendron aralioides HOM05D006076 ORTHO05D007506 1.1e-62 244.6 129 81.4
QL04p075308 Quercus lobata HOM05D006076 ORTHO05D007506 5.7e-62 242.3 129 84.5
HPP92_002577 Vanilla planifolia HOM05D006076 ORTHO05D007506 5.2e-55 219.2 255 46.3
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 5.2e-55 219.2 255 46.3
HanXRQChr16g0508921 Helianthus annuus HOM05D006076 ORTHO05D007506 1.0e-47 194.9 191 51.3
HanXRQChr02g0046461 Helianthus annuus HOM05D006076 ORTHO05D007506 1.4e-47 194.5 192 51.0
Cpa.g.sc178.27 Carica papaya HOM05D006076 ORTHO05D007506 1.8e-44 184.1 152 61.2
BcaNung00408 Brassica carinata HOM05D006076 ORTHO05D007506 6.5e-42 175.6 196 51.0
CBR_g50474 Chara braunii HOM05D001161 ORTHO05D000497 8.0e-40 168.7 126 57.1
QL04p043726 Quercus lobata HOM05D000176 ORTHO05D007506 4.1e-36 156.4 83 84.3
QL04p075322 Quercus lobata HOM05D006076 ORTHO05D007506 8.3e-29 132.1 75 80.0
Aqoxy531s001 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 1.2e-27 128.3 138 51.4
QL04p075364 Quercus lobata HOM05D000397 ORTHO05D007506 7.8e-27 125.6 110 58.2
AUR62037479 Chenopodium quinoa HOM05D006076 ORTHO05D007506 6.6e-18 95.9 119 46.2
Cre14.g630907 Chlamydomonas reinhardtii HOM05D006076 ORTHO05D007506 6.6e-18 95.9 197 31.5
Actinidia40416 Actinidia chinensis HOM05D006076 ORTHO05D007506 2.2e-13 80.9 93 49.5


User provided reference genes

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