Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 9.1e-249 863.2 468 100.0
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 4.2e-137 492.3 469 59.1
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.7e-133 480.3 443 58.9
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 5.3e-124 448.7 463 54.2
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 6.1e-120 435.3 460 52.6
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 5.2e-119 432.2 468 51.7
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 4.1e-116 422.5 357 61.6
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.0e-115 420.2 458 53.1
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 5.9e-115 418.7 344 62.8
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 1.0e-111 407.9 337 61.7
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.2e-110 404.4 459 51.4
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.5e-110 404.1 469 49.5
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.5e-110 404.1 459 50.5
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 2.0e-110 403.7 459 51.9
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.3e-109 401.0 441 50.1
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 1.3e-109 401.0 431 51.0
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.7e-109 400.6 359 58.2
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 1.4e-108 397.5 348 60.6
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.8e-108 397.1 461 50.1
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 7.0e-108 395.2 345 60.0
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 7.0e-108 395.2 333 58.9
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 9.1e-108 394.8 350 57.7
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.0e-107 393.7 355 59.4
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 2.0e-107 393.7 460 50.0
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 2.7e-107 393.3 361 56.2
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.7e-107 393.3 466 48.9
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 4.5e-107 392.5 350 57.7
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 5.9e-107 392.1 349 57.3
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 7.7e-107 391.7 335 60.6
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 7.7e-107 391.7 461 51.2
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 7.7e-107 391.7 333 58.6
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.0e-106 391.3 460 50.9
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 1.3e-106 391.0 431 50.6
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 5.0e-106 389.0 336 60.7
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 8.5e-106 388.3 329 58.1
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 8.5e-106 388.3 473 48.0
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 1.9e-105 387.1 365 57.3
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.9e-105 387.1 359 57.1
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 3.2e-105 386.3 374 55.9
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 4.2e-105 386.0 461 49.7
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.6e-104 384.0 337 60.8
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 2.1e-104 383.6 364 57.7
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 2.7e-104 383.3 337 60.8
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 4.7e-104 382.5 353 56.9
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 6.1e-104 382.1 329 57.8
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 8.0e-104 381.7 331 60.7
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.8e-103 380.6 547 43.3
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 6.8e-103 378.6 325 60.3
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 1.2e-102 377.9 355 57.2
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 1.5e-102 377.5 469 48.0
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 2.0e-102 377.1 441 48.5
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 2.6e-102 376.7 328 58.8
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 4.4e-102 375.9 328 58.8
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 7.5e-102 375.2 348 55.5
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 8.3e-101 371.7 354 57.3
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.4e-100 370.9 346 57.2
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 2.4e-100 370.2 334 61.7
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 2.4e-100 370.2 334 61.7
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 3.1e-100 369.8 351 57.5
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 7.0e-100 368.6 334 57.8
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 9.1e-100 368.2 469 46.9
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.2e-99 367.9 334 61.1
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 1.6e-99 367.5 364 54.7
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 3.5e-99 366.3 350 55.7
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.7e-98 364.0 341 57.2
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 2.9e-98 363.2 351 56.7
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.9e-98 363.2 397 52.6
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 5.0e-98 362.5 322 58.4
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 1.1e-97 361.3 330 57.0
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 1.1e-97 361.3 506 43.7
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.5e-97 360.9 335 56.1
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.5e-97 360.9 330 56.7
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 1.9e-97 360.5 369 56.1
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.9e-97 360.5 335 57.3
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 2.1e-96 357.1 350 54.9
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.6e-96 356.3 347 53.9
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 1.8e-95 354.0 303 58.7
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 5.2e-95 352.4 428 48.4
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 3.4e-94 349.7 386 50.8
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 1.7e-93 347.4 321 53.9
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 4.9e-93 345.9 349 53.3
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 4.9e-93 345.9 347 53.0
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 2.7e-91 340.1 350 53.7
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.0e-90 338.2 332 55.1
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.3e-90 337.8 347 53.0
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.1e-89 334.7 369 49.6
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.2e-88 331.3 365 48.5
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.6e-88 330.9 357 50.7
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 2.8e-88 330.1 245 64.9
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 3.6e-88 329.7 342 52.9
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 3.6e-88 329.7 342 51.5
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.8e-87 327.4 303 55.8
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 4.0e-87 326.2 341 52.5
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 8.9e-87 325.1 286 56.3
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 8.9e-87 325.1 358 49.4
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.5e-86 324.3 341 51.9
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.5e-86 324.3 339 52.8
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 2.0e-86 323.9 351 51.6
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 2.0e-86 323.9 341 51.9
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 2.0e-86 323.9 341 51.6
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 2.0e-86 323.9 351 51.6
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.4e-86 322.8 348 51.7
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 9.8e-86 321.6 341 51.6
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 9.8e-86 321.6 341 51.6
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 6.4e-85 318.9 331 50.8
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.9e-84 317.4 347 49.6
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.6e-83 314.3 349 51.0
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 2.0e-83 313.9 307 50.8
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 4.6e-83 312.8 279 55.9
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 6.6e-82 308.9 287 55.7
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 6.6e-82 308.9 361 48.2
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.1e-81 308.1 288 55.6
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.3e-81 306.2 369 47.4
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.1e-80 303.9 347 49.3
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 3.6e-80 303.1 298 54.0
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 3.6e-80 303.1 295 53.6
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 3.6e-80 303.1 298 54.0
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 3.6e-80 303.1 300 53.3
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 4.7e-80 302.8 299 53.8
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 6.2e-80 302.4 291 54.0
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 1.8e-79 300.8 281 54.8
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 2.3e-79 300.4 345 49.6
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 2.3e-79 300.4 345 48.7
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 4.9e-77 292.7 323 49.8
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 7.3e-73 278.9 255 57.6
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 1.5e-70 271.2 460 38.9
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.6e-70 270.4 340 47.6
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.4e-70 269.6 206 64.6
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.4e-68 262.7 202 64.4
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 7.1e-68 262.3 234 58.5
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.6e-67 261.2 290 50.7
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.2e-64 251.5 202 63.4
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 4.4e-62 243.0 359 41.8
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 2.1e-59 234.2 160 71.2
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.7e-59 233.8 277 47.7
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 2.4e-52 210.7 210 53.3
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.6e-48 198.0 273 43.6
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 3.7e-40 170.2 353 34.3
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 2.4e-31 141.0 253 41.1
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 6.9e-31 139.4 117 59.8
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 3.4e-30 137.1 202 39.6
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.5e-28 129.8 286 34.3
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 9.3e-28 129.0 311 32.5
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 1.9e-25 121.3 147 48.3
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.9e-25 121.3 347 30.5
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 6.3e-24 116.3 118 47.5
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 9.7e-17 92.4 70 64.3
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 1.4e-15 88.6 124 44.4
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 8.5e-13 79.3 62 62.9
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.7e-08 65.1 38 73.7
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 2.4e-07 61.2 64 48.4
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 1.2e-06 58.9 40 62.5


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