Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 1.6e-211 739.2 375 100.0
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 4.4e-145 518.5 372 75.8
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 8.3e-144 514.2 361 74.5
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 2.9e-141 505.8 363 74.9
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 9.5e-140 500.7 342 76.9
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 2.1e-139 499.6 344 77.6
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 2.6e-137 492.7 355 73.0
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 4.4e-137 491.9 367 71.4
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 6.3e-136 488.0 358 71.5
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 1.8e-135 486.5 363 72.7
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 3.1e-135 485.7 360 72.2
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 3.1e-135 485.7 363 69.7
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 7.0e-135 484.6 360 71.1
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 7.0e-135 484.6 360 70.8
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 2.0e-134 483.0 362 71.5
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 4.5e-134 481.9 363 70.5
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 7.8e-134 481.1 338 72.8
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 1.3e-133 480.3 305 80.3
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 1.7e-133 479.9 361 71.5
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 1.5e-132 476.9 365 69.0
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 2.5e-132 476.1 369 68.0
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 7.3e-132 474.6 360 70.0
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 3.6e-131 472.2 360 70.3
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 6.1e-131 471.5 360 69.7
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.8e-130 469.9 298 80.5
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 3.1e-130 469.2 296 78.4
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 6.8e-130 468.0 366 68.0
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 8.9e-130 467.6 298 80.2
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.5e-129 466.8 382 67.3
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 3.4e-129 465.7 342 71.9
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 5.8e-129 464.9 355 67.3
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 5.8e-129 464.9 291 79.4
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 9.8e-129 464.2 359 67.4
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 9.8e-129 464.2 358 69.0
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 1.7e-128 463.4 311 75.6
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 2.2e-128 463.0 364 69.0
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 2.2e-128 463.0 368 67.9
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 8.3e-128 461.1 372 65.3
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 1.4e-127 460.3 362 68.5
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 1.4e-127 460.3 367 65.9
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 2.4e-127 459.5 398 64.3
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 3.2e-127 459.1 367 67.8
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 4.1e-127 458.8 321 71.7
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 4.1e-127 458.8 327 71.6
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 9.2e-127 457.6 349 68.8
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 9.2e-127 457.6 297 75.4
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 1.2e-126 457.2 365 66.3
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 6.0e-126 454.9 288 77.1
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 2.3e-125 453.0 359 65.7
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 8.6e-125 451.1 323 70.9
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 8.6e-125 451.1 366 65.6
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 2.5e-124 449.5 312 72.1
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 3.3e-124 449.1 348 69.5
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 4.3e-124 448.7 326 71.5
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 1.2e-123 447.2 296 74.0
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 2.1e-123 446.4 365 65.2
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 1.8e-122 443.4 365 66.0
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 3.1e-122 442.6 322 69.9
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 5.2e-122 441.8 329 68.7
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 1.5e-121 440.3 311 72.7
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 2.0e-121 439.9 323 69.0
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 2.0e-121 439.9 323 69.0
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 2.6e-121 439.5 335 66.9
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 2.6e-121 439.5 326 68.7
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 3.4e-121 439.1 323 69.0
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 1.7e-120 436.8 268 83.2
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 2.2e-120 436.4 346 64.7
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 4.9e-120 435.3 338 65.7
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 4.9e-120 435.3 324 66.7
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 3.2e-119 432.6 323 67.8
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 3.2e-119 432.6 337 66.8
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 7.1e-119 431.4 339 65.2
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 5.1e-117 425.2 389 59.9
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 1.1e-116 424.1 336 66.4
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 9.5e-116 421.0 261 81.6
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 2.1e-115 419.9 365 64.7
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.2e-113 414.1 353 64.0
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 4.4e-113 412.1 290 74.8
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 7.5e-113 411.4 323 65.0
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 1.7e-112 410.2 351 61.0
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 1.7e-112 410.2 346 62.4
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 2.9e-112 409.5 342 64.6
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 6.4e-112 408.3 351 63.8
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 2.5e-108 396.4 271 77.5
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 5.6e-108 395.2 417 57.1
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 1.8e-106 390.2 470 48.7
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 1.7e-104 383.6 265 68.7
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 1.4e-103 380.6 548 44.7
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 9.3e-103 377.9 491 46.2
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 3.9e-101 372.5 360 59.2
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 1.9e-100 370.2 274 73.7
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 4.4e-97 359.0 232 75.9
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 4.9e-96 355.5 236 73.7
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 7.3e-92 341.7 270 68.1
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 9.6e-92 341.3 287 61.0
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 5.3e-90 335.5 288 57.6
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 1.5e-89 334.0 301 56.8
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 2.6e-89 333.2 280 66.8
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 2.9e-88 329.7 300 55.7
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 2.7e-86 323.2 390 52.1
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.5e-84 317.4 287 54.7
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 1.1e-82 311.2 181 84.5
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.3e-59 234.6 211 60.7
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 5.3e-58 229.2 199 56.3
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 5.3e-58 229.2 357 45.9
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 1.5e-57 227.6 142 76.1
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 7.7e-57 225.3 196 63.3
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 1.7e-56 224.2 170 64.7
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 1.4e-53 214.5 296 41.6
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 2.8e-51 206.8 215 49.3
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 9.1e-50 201.8 202 55.9
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 2.0e-49 200.7 311 38.9
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 2.0e-36 157.5 101 80.2
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 2.0e-36 157.5 170 51.2
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 5.4e-34 149.4 169 48.5
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 3.2e-31 140.2 105 63.8
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 9.1e-26 122.1 75 77.3
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 9.1e-26 122.1 75 77.3
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 4.5e-25 119.8 92 65.2
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 2.9e-19 100.5 131 48.1
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 7.0e-18 95.9 54 85.2
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 1.2e-17 95.1 77 57.1
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 3.3e-15 87.0 55 72.7
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 5.6e-15 86.3 155 32.9
Potri.002G030701 Populus trichocarpa HOM05D001587 ORTHO05D014867 1.6e-14 84.7 103 47.6
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.4e-12 77.0 57 68.4
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-11 74.7 57 66.7
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-11 74.7 57 66.7
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-11 74.7 57 66.7
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-11 74.7 57 66.7
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-11 74.7 57 66.7
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.2e-11 74.3 57 66.7
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.2e-10 70.5 57 64.9
Sabra02G0024500 Salix brachista HOM05D001587 ORTHO05D037360 1.1e-07 62.0 38 76.3


User provided reference genes

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