Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001306001 Vitis vinifera HOM05D009510 ORTHO05D010335 6.3e-100 367.5 188 100.0
Dinv21618 Davidia involucrata HOM05D009510 ORTHO05D010335 1.9e-35 153.3 188 49.5
Dinv39126 Davidia involucrata HOM05D009510 ORTHO05D010335 1.9e-32 143.3 196 48.0
Potri.001G122600 Populus trichocarpa HOM05D009510 ORTHO05D010335 1.7e-28 130.2 189 45.5
Hma1.2p1_0753F.1_g212990 Hydrangea macrophylla HOM05D009510 ORTHO05D010335 1.2e-23 114.0 206 42.2
Sabra01G0094500 Salix brachista HOM05D009510 ORTHO05D010335 2.8e-23 112.8 186 42.5
Thecc.03G254000 Theobroma cacao HOM05D009510 ORTHO05D010335 9.9e-21 104.4 193 39.9
Duzib068G0669 Durio zibethinus HOM05D009510 ORTHO05D010335 2.2e-20 103.2 186 40.9
Atru.chr9.1339 Acer truncatum HOM05D009510 ORTHO05D010335 1.4e-19 100.5 188 43.6
Manes.01G079300 Manihot esculenta HOM05D009510 ORTHO05D010335 3.5e-18 95.9 189 36.0
CiPaw.12G108600 Carya illinoinensis HOM05D009510 ORTHO05D010335 4.6e-18 95.5 190 37.4
Prupe.5G072500 Prunus persica HOM05D015618 ORTHO05D010335 6.0e-18 95.1 185 37.3
Duzib205G1076 Durio zibethinus HOM05D009510 ORTHO05D010335 6.6e-17 91.7 184 40.2
Gohir.A08G172100 Gossypium hirsutum HOM05D009510 ORTHO05D010335 6.6e-17 91.7 190 40.0
DCAR_027783 Daucus carota HOM05D009510 ORTHO05D010335 7.3e-16 88.2 182 33.0
Gorai.004G200500 Gossypium raimondii HOM05D009510 ORTHO05D010335 7.3e-16 88.2 190 40.5
Gohir.D08G190400 Gossypium hirsutum HOM05D009510 ORTHO05D010335 9.6e-16 87.8 190 40.0
Ciclev10022879m.g Citrus clementina HOM05D009510 ORTHO05D010335 3.6e-15 85.9 98 46.9
Gorai.008G238200 Gossypium raimondii HOM05D009510 ORTHO05D010335 3.1e-14 82.8 185 36.2
Gohir.D12G222201 Gossypium hirsutum HOM05D009510 ORTHO05D010335 1.5e-13 80.5 186 36.0
Lsat_1_v5_gn_6_91520 Lactuca sativa HOM05D012984 ORTHO05D010335 1.5e-13 80.5 186 31.7
Gohir.A12G220001 Gossypium hirsutum HOM05D009510 ORTHO05D010335 2.0e-13 80.1 186 37.6
CSS0028488 Camellia sinensis var. sinensis HOM05D009510 ORTHO05D010335 7.6e-13 78.2 146 42.5
vmacro00232 Vaccinium macrocarpon HOM05D009510 ORTHO05D010335 6.4e-12 75.1 75 54.7
Cfa012745 Carpinus fangiana HOM05D009510 ORTHO05D010335 1.1e-11 74.3 91 48.4
HanXRQChr03g0088641 Helianthus annuus HOM05D012984 ORTHO05D010335 1.9e-11 73.6 191 32.5
Glyma.11G031700 Glycine max HOM05D013054 ORTHO05D010335 2.4e-11 73.2 181 33.7
ECA240G2875 Erigeron canadensis HOM05D012984 ORTHO05D010335 7.1e-11 71.6 99 44.4
MD00G1115000 Malus domestica HOM05D015618 ORTHO05D010335 1.2e-10 70.9 187 32.1
Potri.001G123900 Populus trichocarpa HOM05D028323 ORTHO05D036648 1.2e-10 70.9 186 31.2
VMungo1215G2077 Vigna mungo HOM05D013054 ORTHO05D010335 1.6e-10 70.5 190 33.7
DCAR_006823 Daucus carota HOM05D009510 ORTHO05D010335 2.1e-10 70.1 65 56.9
PGSC0003DMG400004801 Solanum tuberosum HOM05D012984 ORTHO05D010335 2.1e-10 70.1 189 34.4
SalBow6G6148 Salvia bowleyana HOM05D012984 ORTHO05D010335 3.5e-10 69.3 85 48.2
Haze_07883 Corylus avellana HOM05D009510 ORTHO05D010335 6.0e-10 68.6 83 49.4
Migut.A00962 Erythranthe guttata HOM05D012984 ORTHO05D010335 7.9e-10 68.2 137 35.0
Psat0s3774g0040 Pisum sativum HOM05D013054 ORTHO05D010335 7.9e-10 68.2 73 47.9
Glyma.01G210300 Glycine max HOM05D013054 ORTHO05D010335 1.8e-09 67.0 189 32.8
CAN.G1218.11 Capsicum annuum HOM05D012984 ORTHO05D010335 6.7e-09 65.1 91 45.1
Nitab4.5_0000312g0200 Nicotiana tabacum HOM05D012984 ORTHO05D010335 8.7e-09 64.7 186 29.6
Aqoxy7G00746 Aquilegia oxysepala HOM05D009510 ORTHO05D010335 1.1e-08 64.3 79 40.5
Lj2g0024641 Lotus japonicus HOM05D013054 ORTHO05D010335 1.1e-08 64.3 50 62.0
DCAR_004946 Daucus carota HOM05D012984 ORTHO05D010335 2.5e-08 63.2 189 30.7
Nitab4.5_0002727g0010 Nicotiana tabacum HOM05D012984 ORTHO05D010335 3.3e-08 62.8 75 46.7
PGR042G1660 Punica granatum HOM05D015618 ORTHO05D010335 7.4e-08 61.6 185 32.4
FAN08G2540 Fragaria x ananassa HOM05D015618 ORTHO05D010335 9.6e-08 61.2 196 30.6
ClCG10G002770 Citrullus lanatus HOM05D040458 ORTHO05D010335 1.6e-07 60.5 54 51.9
Phvul.002G062100 Phaseolus vulgaris HOM05D013054 ORTHO05D010335 1.6e-07 60.5 100 40.0
RcHm_v2.0_Chr7g0202891 Rosa chinensis HOM05D015618 ORTHO05D010335 3.7e-07 59.3 207 32.4
Lalb_Chr16g0379641 Lupinus albus HOM05D013054 ORTHO05D010335 4.8e-07 58.9 45 60.0
Solyc08g078840.3 Solanum lycopersicum HOM05D012984 ORTHO05D010335 4.8e-07 58.9 95 46.3
TWI81G0126 Tripterygium wilfordii HOM05D009510 ORTHO05D010335 4.8e-07 58.9 103 35.0
CsaV3_3G002810 Cucumis sativus L. HOM05D040458 ORTHO05D010335 6.2e-07 58.5 54 51.9
Medtr5g012400 Medicago truncatula HOM05D013054 ORTHO05D010335 1.1e-06 57.8 77 48.1
Sopen08g027300 Solanum pennellii HOM05D012984 ORTHO05D010335 1.1e-06 57.8 86 45.3
Nn6g33998 Nelumbo nucifera HOM05D013054 ORTHO05D010335 1.4e-06 57.4 49 61.2
arahy.Tifrunner.gnm1.ann1.52RI3H Arachis hypogaea HOM05D013054 ORTHO05D010335 2.4e-06 56.6 187 31.0
FAN13G2980 Fragaria x ananassa HOM05D015618 ORTHO05D010335 2.4e-06 56.6 198 33.3
Sed0009754 Sechium edule HOM05D040458 ORTHO05D010335 4.0e-06 55.8 56 46.4
FvH4_5g00070 Fragaria vesca HOM05D015618 ORTHO05D010335 6.9e-06 55.1 196 30.1
FAN04G3221 Fragaria x ananassa HOM05D015618 ORTHO05D010335 9.0e-06 54.7 200 31.5


User provided reference genes

Program Settings