Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 7.2e-115 417.5 256 100.0
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.6e-93 346.7 231 90.9
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 3.6e-66 255.8 257 69.3
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.5e-56 223.8 130 94.6
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.0e-56 223.4 130 96.2
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 3.3e-35 152.9 203 53.2
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 4.5e-32 142.5 219 50.2
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 9.3e-30 134.8 220 43.6
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 1.5e-27 127.5 193 46.1
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 6.9e-25 118.6 196 45.4
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 1.5e-24 117.5 205 47.3
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.4e-24 116.3 198 43.4
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 7.6e-24 115.2 211 41.2
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 1.0e-23 114.8 181 45.3
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.0e-23 114.8 221 42.1
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 1.7e-23 114.0 199 41.7
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 1.1e-22 111.3 215 41.4
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 2.5e-22 110.2 196 43.9
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 9.3e-22 108.2 194 42.8
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 9.3e-22 108.2 194 42.8
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 1.6e-21 107.5 126 53.2
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 3.5e-21 106.3 203 40.4
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 1.3e-20 104.4 211 42.7
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 3.0e-20 103.2 254 33.5
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 3.0e-20 103.2 292 35.6
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 8.7e-20 101.7 185 43.2
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 1.1e-19 101.3 180 43.3
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 1.9e-19 100.5 202 41.6
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.5e-19 100.1 239 37.7
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 4.3e-19 99.4 164 42.7
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 5.7e-19 99.0 154 42.9
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 6.3e-18 95.5 178 39.9
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 1.1e-17 94.7 240 37.5
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 1.8e-17 94.0 181 41.4
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 5.3e-17 92.4 160 47.5
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 9.0e-17 91.7 200 37.5
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 1.5e-16 90.9 68 67.6
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 1.5e-16 90.9 125 51.2
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 2.0e-16 90.5 160 42.5
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 3.4e-16 89.7 203 36.9
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 5.9e-16 89.0 159 42.1
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 5.9e-16 89.0 64 70.3
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.0e-15 88.2 191 37.7
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 2.2e-15 87.0 64 62.5
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 2.2e-15 87.0 173 44.5
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 6.5e-15 85.5 224 37.5
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 4.2e-14 82.8 228 38.2
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 5.5e-14 82.4 133 44.4
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 7.2e-14 82.0 127 44.1
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 7.2e-14 82.0 156 39.1
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 7.2e-14 82.0 75 56.0
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 7.2e-14 82.0 226 34.5
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 9.4e-14 81.6 236 35.2
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 1.2e-13 81.3 162 42.6
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 1.2e-13 81.3 181 38.1
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 1.6e-13 80.9 69 62.3
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 2.1e-13 80.5 191 37.7
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 3.6e-13 79.7 75 57.3
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 3.6e-13 79.7 165 40.0
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 4.6e-13 79.3 199 38.7
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 4.6e-13 79.3 236 39.4
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 6.1e-13 79.0 130 43.1
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 6.1e-13 79.0 195 36.9
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 1.4e-12 77.8 198 37.9
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 1.8e-12 77.4 175 38.3
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.8e-12 77.4 192 37.0
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 2.3e-12 77.0 120 45.0
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 6.7e-12 75.5 185 40.0
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 6.7e-12 75.5 187 34.8
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 6.7e-12 75.5 233 32.6
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 8.8e-12 75.1 120 44.2
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 8.8e-12 75.1 120 44.2
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 1.1e-11 74.7 120 43.3
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 1.1e-11 74.7 132 43.9
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 5.7e-11 72.4 231 33.8
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 1.3e-10 71.2 205 34.6
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 2.8e-10 70.1 198 34.8
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 1.4e-09 67.8 193 32.6
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.8e-09 67.4 183 38.3
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 1.8e-09 67.4 174 35.6
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 6.9e-09 65.5 196 33.2
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 2.0e-08 63.9 192 31.2
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.0e-07 61.6 77 45.5
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 1.0e-07 61.6 161 37.3
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 2.2e-07 60.5 161 32.9
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 6.5e-07 58.9 160 37.5
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.5e-07 58.9 85 41.2
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 1.1e-06 58.2 158 36.7
AagrBONN_evm.TU.Sc2ySwM_228.5650 Anthoceros agrestis HOM05D017655 ORTHO05D008750 1.4e-06 57.8 130 34.6
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 1.4e-06 57.8 201 32.8
Pp3c1_16980 Physcomitrium patens HOM05D017655 ORTHO05D008750 3.2e-06 56.6 94 38.3
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 5.5e-06 55.8 200 32.5
Cre06.g296900 Chlamydomonas reinhardtii HOM05D017655 ORTHO05D008750 7.2e-06 55.5 63 47.6
Duzib205G1398 Durio zibethinus HOM05D007490 ORTHO05D008750 7.2e-06 55.5 174 33.9
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 7.2e-06 55.5 175 34.9
Os07g0656300 Oryza sativa ssp. japonica HOM05D022794 ORTHO05D023027 7.2e-06 55.5 69 46.4
BraA09t40485Z Brassica rapa HOM05D014273 ORTHO05D008750 9.4e-06 55.1 136 37.5


User provided reference genes

Program Settings