Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g17921 Fragaria vesca HOM05D008382 ORTHO05D009660 3.8e-68 261.5 148 100.0
FvH4_3g40201 Fragaria vesca HOM05D000004 ORTHO05D000002 9.7e-64 246.9 147 95.9
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 6.6e-20 101.3 139 51.1
Potri.001G006850 Populus trichocarpa HOM05D028484 ORTHO05D000563 7.3e-19 97.8 145 49.7
FvH4_6g32371 Fragaria vesca HOM05D008382 ORTHO05D011503 3.6e-18 95.5 152 40.8
Medtr2g076860 Medicago truncatula HOM05D008382 ORTHO05D011503 6.2e-18 94.7 98 46.9
BcaC07g39411 Brassica carinata HOM05D008382 ORTHO05D011503 1.4e-17 93.6 70 60.0
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 6.8e-17 91.3 149 36.9
FvH4_4g14286 Fragaria vesca HOM05D008382 ORTHO05D000563 8.9e-17 90.9 152 38.8
PGR083G1481 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-16 90.5 100 50.0
EL10Ac3g06996 Beta vulgaris HOM05D008382 ORTHO05D000563 4.4e-16 88.6 60 65.0
EL10Ac2g03002 Beta vulgaris HOM05D000004 ORTHO05D000002 5.8e-16 88.2 60 63.3
EL10Ac6g14458 Beta vulgaris HOM05D008382 ORTHO05D011503 5.8e-16 88.2 102 48.0
Potri.003G026106 Populus trichocarpa HOM05D028484 ORTHO05D000002 5.8e-16 88.2 57 68.4
PGR119G2216 Punica granatum HOM05D000004 ORTHO05D000563 1.7e-15 86.7 130 42.3
Actinidia10157 Actinidia chinensis HOM05D000124 ORTHO05D009660 2.9e-15 85.9 60 55.0
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 3.7e-15 85.5 148 35.8
Hma1.2p1_0253F.1_g103130 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 4.9e-15 85.1 85 54.1
PGR102G0017 Punica granatum HOM05D000004 ORTHO05D000002 4.9e-15 85.1 100 49.0
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 6.4e-15 84.7 55 65.5
EL10As2g23215 Beta vulgaris HOM05D008382 ORTHO05D000002 1.4e-14 83.6 149 34.9
MBI18_g26690_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 3.2e-14 82.4 70 51.4
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 4.1e-14 82.0 57 56.1
Eucgr.L00350 Eucalyptus grandis HOM05D000018 ORTHO05D000453 4.1e-14 82.0 104 40.4
PSO063G7224 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-14 81.6 60 58.3
PSO339G2721 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-14 81.6 60 58.3
EL10Ac6g14531 Beta vulgaris HOM05D000009 ORTHO05D000008 1.2e-13 80.5 115 39.1
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 1.2e-13 80.5 140 38.6
PSO781G0082 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-13 80.5 60 58.3
FvH4_4g12742 Fragaria vesca HOM05D000004 ORTHO05D000002 1.6e-13 80.1 60 55.0
PSO063G2514 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-13 80.1 63 54.0
RcHm_v2.0_Chr7g0227361 Rosa chinensis HOM05D000038 ORTHO05D030549 2.1e-13 79.7 68 55.9
PSO017G7238 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-13 79.3 60 56.7
PSO832G1458 Papaver somniferum HOM05D000004 ORTHO05D009660 2.7e-13 79.3 77 46.8
PSO761G0440 Papaver somniferum HOM05D000004 ORTHO05D000002 6.0e-13 78.2 60 53.3
Psat4g143480 Pisum sativum HOM05D010412 ORTHO05D011503 6.0e-13 78.2 99 45.5
PSO063G0930 Papaver somniferum HOM05D000004 ORTHO05D000002 7.8e-13 77.8 61 49.2
Psat7g229400 Pisum sativum HOM05D010412 ORTHO05D011503 7.8e-13 77.8 86 45.3
TWI77G0626 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.0e-12 77.4 98 40.8
PSO541G3038 Papaver somniferum HOM05D000004 ORTHO05D000563 1.7e-12 76.6 93 41.9
PSO832G1137 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-12 76.3 59 50.8
Psat3g118480 Pisum sativum HOM05D010412 ORTHO05D011503 2.3e-12 76.3 87 40.2
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 2.3e-12 76.3 60 56.7
PSO170G1357 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-12 75.9 63 50.8
PSO339G0871 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-12 75.9 83 44.6
PSO675G2557 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-12 75.9 60 51.7
PSO675G1879 Papaver somniferum HOM05D000004 ORTHO05D000002 5.1e-12 75.1 87 43.7
Manes.16G058925 Manihot esculenta HOM05D000004 ORTHO05D000002 6.6e-12 74.7 62 46.8
PSO017G0752 Papaver somniferum HOM05D000004 ORTHO05D000002 6.6e-12 74.7 63 54.0
MBI10_g05543_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 8.6e-12 74.3 60 46.7
PSO170G4806 Papaver somniferum HOM05D000004 ORTHO05D000563 8.6e-12 74.3 60 46.7
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 8.6e-12 74.3 60 55.0
PSO063G2046 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-11 73.9 58 53.4
PSO063G1779 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-11 73.2 97 33.0
PSO675G7964 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-11 73.2 94 40.4
PSO339G5592 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-11 72.8 106 32.1
TAR694G0001 Trochodendron aralioides HOM05D000374 ORTHO05D000238 3.3e-11 72.4 51 58.8
CiPaw.05G240600 Carya illinoinensis HOM05D008382 ORTHO05D009660 4.3e-11 72.0 61 41.0
MBI05_g17915_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 4.3e-11 72.0 112 37.5
PSO170G4300 Papaver somniferum HOM05D000004 ORTHO05D000002 4.3e-11 72.0 57 52.6
Dinv06798 Davidia involucrata HOM05D000004 ORTHO05D000563 5.6e-11 71.6 79 40.5
MBI03_g28299_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 5.6e-11 71.6 70 47.1
Prupe.7G030900 Prunus persica HOM05D008382 ORTHO05D009660 5.6e-11 71.6 80 52.5
Medtr6g033835 Medicago truncatula HOM05D008382 ORTHO05D009660 7.3e-11 71.2 46 67.4
PGR083G2793 Punica granatum HOM05D000004 ORTHO05D000002 9.5e-11 70.9 82 41.5
Medtr1g027170 Medicago truncatula HOM05D008382 ORTHO05D011503 1.6e-10 70.1 53 60.4
PSO063G5223 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-10 70.1 60 46.7
Psat1g151760 Pisum sativum HOM05D010412 ORTHO05D011503 1.6e-10 70.1 83 41.0
PGR002G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-10 70.1 60 46.7
EL10Ac1g00890 Beta vulgaris HOM05D008382 ORTHO05D000002 2.1e-10 69.7 149 32.2
BcaC03g16464 Brassica carinata HOM05D008382 ORTHO05D000563 2.1e-10 69.7 46 63.0
ClCG09G013120 Citrullus lanatus HOM05D000004 ORTHO05D009660 2.1e-10 69.7 61 42.6
Psat1g014440 Pisum sativum HOM05D008382 ORTHO05D011503 2.8e-10 69.3 46 58.7
Sabra11G0010700 Salix brachista HOM05D000004 ORTHO05D009927 2.8e-10 69.3 62 43.5
ClCG10G011900 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.7e-10 68.6 62 46.8
PSO732G0311 Papaver somniferum HOM05D000004 ORTHO05D000002 4.7e-10 68.6 102 37.3
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 4.7e-10 68.6 82 40.2
AUR62028416 Chenopodium quinoa HOM05D008382 ORTHO05D000563 6.2e-10 68.2 41 70.7
Nn6g33985 Nelumbo nucifera HOM05D013991 ORTHO05D009660 6.2e-10 68.2 117 40.2
Atru.chr6.2464 Acer truncatum HOM05D000004 ORTHO05D000563 8.1e-10 67.8 62 48.4
ECA240G2139 Erigeron canadensis HOM05D000006 ORTHO05D000002 1.1e-09 67.4 57 43.9
Dinv17484 Davidia involucrata HOM05D000004 ORTHO05D000563 1.8e-09 66.6 57 49.1
Hma1.2p1_0314F.1_g122100 Hydrangea macrophylla HOM05D000004 ORTHO05D009927 1.8e-09 66.6 61 45.9
Medtr4g102460 Medicago truncatula HOM05D000004 ORTHO05D000002 1.8e-09 66.6 95 38.9
Thecc.01G105600 Theobroma cacao HOM05D000004 ORTHO05D000563 1.8e-09 66.6 76 39.5
CAN.G249.16 Capsicum annuum HOM05D008382 ORTHO05D009660 2.4e-09 66.2 134 33.6
FvH4_2g02661 Fragaria vesca HOM05D008382 ORTHO05D009660 2.4e-09 66.2 145 29.7
Hund23938 Selenicereus undatus HOM05D000004 ORTHO05D000563 3.1e-09 65.9 65 44.6
CiPaw.14G083400 Carya illinoinensis HOM05D000004 ORTHO05D000563 4.0e-09 65.5 62 43.5
ECA236G3294 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.2e-09 65.1 66 37.9
CSS0011613 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D009660 6.8e-09 64.7 41 63.4
PGR083G0982 Punica granatum HOM05D000004 ORTHO05D000002 6.8e-09 64.7 90 38.9
Dinv04070 Davidia involucrata HOM05D019202 ORTHO05D009660 8.9e-09 64.3 91 40.7
Hma1.2p1_2925F.1_g330460 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 8.9e-09 64.3 59 45.8
HanXRQChr10g0318501 Helianthus annuus HOM05D000004 ORTHO05D000002 1.2e-08 63.9 57 43.9
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.2e-08 63.9 57 49.1
Hund19909 Selenicereus undatus HOM05D008634 ORTHO05D000695 1.5e-08 63.5 83 38.6
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 2.0e-08 63.2 37 73.0
ECA238G1029 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-08 62.8 57 43.9
ECA246G1983 Erigeron canadensis HOM05D000006 ORTHO05D000002 2.6e-08 62.8 57 40.4
Rhsim09G0023400 Rhododendron simsii HOM05D000004 ORTHO05D000563 2.6e-08 62.8 66 47.0
Thecc.05G102300 Theobroma cacao HOM05D000004 ORTHO05D000563 2.6e-08 62.8 81 37.0
Manes.10G049950 Manihot esculenta HOM05D000004 ORTHO05D000002 3.4e-08 62.4 50 50.0
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 4.4e-08 62.0 57 45.6
Medtr7g105270 Medicago truncatula HOM05D000004 ORTHO05D000002 5.8e-08 61.6 86 38.4
FvH4_2g19251 Fragaria vesca HOM05D000004 ORTHO05D000563 7.6e-08 61.2 59 44.1
Manes.16G085001 Manihot esculenta HOM05D000004 ORTHO05D000002 7.6e-08 61.2 57 43.9
Psat5g279400 Pisum sativum HOM05D008382 ORTHO05D011503 7.6e-08 61.2 44 59.1
QL09p008068 Quercus lobata HOM05D000004 ORTHO05D009660 7.6e-08 61.2 66 45.5
TWI34G1438 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.6e-08 61.2 66 34.8
Lsat_1_v5_gn_1_65361 Lactuca sativa HOM05D004609 ORTHO05D005537 9.9e-08 60.8 70 31.4
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 9.9e-08 60.8 57 43.9
Medtr1g105095 Medicago truncatula HOM05D014350 ORTHO05D000563 1.3e-07 60.5 57 40.4
Psat5g040160 Pisum sativum HOM05D010412 ORTHO05D011503 1.3e-07 60.5 77 39.0
PGR042G2872 Punica granatum HOM05D000005 ORTHO05D015698 1.3e-07 60.5 64 48.4
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-07 60.5 57 45.6
Rhsim04G0049200 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.3e-07 60.5 57 43.9
SEGI_05302 Sequoiadendron giganteum HOM05D013116 ORTHO05D012902 1.3e-07 60.5 66 39.4
CAN.G2.23 Capsicum annuum HOM05D008382 ORTHO05D009660 1.7e-07 60.1 57 50.9
Medtr7g056297 Medicago truncatula HOM05D000004 ORTHO05D000002 1.7e-07 60.1 83 34.9
Sabra19G0021900 Salix brachista HOM05D000004 ORTHO05D000002 1.7e-07 60.1 98 35.7
SabraUnG0000900 Salix brachista HOM05D000004 ORTHO05D000002 1.7e-07 60.1 98 35.7
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.2e-07 59.7 66 33.3
Carub.0001s4356 Capsella rubella HOM05D053214 ORTHO05D011503 2.9e-07 59.3 36 69.4
Nn2g10229 Nelumbo nucifera HOM05D013991 ORTHO05D009660 2.9e-07 59.3 47 55.3
PGR134G0003 Punica granatum HOM05D000004 ORTHO05D000002 2.9e-07 59.3 56 46.4
Sabra19G0020900 Salix brachista HOM05D000004 ORTHO05D000002 2.9e-07 59.3 96 32.3
Hund08493 Selenicereus undatus HOM05D008980 ORTHO05D000563 2.9e-07 59.3 54 48.1
SEGI_28996 Sequoiadendron giganteum HOM05D013116 ORTHO05D000563 2.9e-07 59.3 99 34.3
PGR119G1885 Punica granatum HOM05D000004 ORTHO05D000002 3.8e-07 58.9 81 37.0
Rhsim04G0098200 Rhododendron simsii HOM05D000004 ORTHO05D000563 3.8e-07 58.9 57 40.4
SEGI_28582 Sequoiadendron giganteum HOM05D000060 ORTHO05D000563 3.8e-07 58.9 81 34.6
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 4.9e-07 58.5 57 42.1
Manes.06G054150 Manihot esculenta HOM05D000004 ORTHO05D000002 4.9e-07 58.5 57 43.9
Hund10392 Selenicereus undatus HOM05D013854 ORTHO05D000563 4.9e-07 58.5 54 40.7
SEGI_30636 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 4.9e-07 58.5 108 32.4
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 6.4e-07 58.2 61 44.3
Hund17465 Selenicereus undatus HOM05D008980 ORTHO05D016385 6.4e-07 58.2 83 33.7
Hund20088 Selenicereus undatus HOM05D000004 ORTHO05D000563 6.4e-07 58.2 51 51.0
TWI09G0867 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-07 58.2 62 41.9
ECA234G0885 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.4e-07 57.8 57 40.4
Hma1.2p1_1067F.1_g253920 Hydrangea macrophylla HOM05D000004 ORTHO05D009660 8.4e-07 57.8 87 34.5
SEGI_02366 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 8.4e-07 57.8 58 41.4
ECA233G2099 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.1e-06 57.4 83 39.8
PGR004G1008 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-06 57.4 57 42.1
PGR102G1257 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-06 57.4 43 53.5
SEGI_12086 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.1e-06 57.4 56 35.7
SEGI_16637 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.1e-06 57.4 56 42.9
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.1e-06 57.4 49 49.0
Atru.chr5.2438 Acer truncatum HOM05D030512 ORTHO05D026243 1.4e-06 57.0 125 31.2
ClCG11G010970 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.4e-06 57.0 86 36.0
Prupe.5G246300 Prunus persica HOM05D000004 ORTHO05D000002 1.4e-06 57.0 56 39.3
Rhsim05G0179000 Rhododendron simsii HOM05D011528 ORTHO05D015218 1.4e-06 57.0 63 33.3
Sabra16G0279800 Salix brachista HOM05D000013 ORTHO05D000002 1.4e-06 57.0 57 47.4
SEGI_29275 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.4e-06 57.0 56 39.3
ECA246G3393 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-06 56.6 100 28.0
PSO339G1289 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 56.6 42 54.8
PGR031G1659 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-06 56.6 57 42.1
SEGI_30488 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.9e-06 56.6 86 32.6
EL10As9g23944 Beta vulgaris HOM05D000178 ORTHO05D000229 2.4e-06 56.2 79 41.8
Thhalv10003071m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 2.4e-06 56.2 68 36.8
Atru.chr6.368 Acer truncatum HOM05D000004 ORTHO05D000563 3.2e-06 55.8 56 46.4
BcaB04g18772 Brassica carinata HOM05D008382 ORTHO05D011503 3.2e-06 55.8 55 47.3
Lsat_1_v5_gn_9_45101 Lactuca sativa HOM05D037789 ORTHO05D015698 3.2e-06 55.8 86 32.6
Prupe.7G034800 Prunus persica HOM05D000004 ORTHO05D000563 3.2e-06 55.8 43 51.2
SEGI_39453 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 3.2e-06 55.8 93 29.0
Atru.chr6.120 Acer truncatum HOM05D000004 ORTHO05D009660 4.2e-06 55.5 51 45.1
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 4.2e-06 55.5 81 37.0
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 4.2e-06 55.5 81 37.0
Sp1g29630 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.2e-06 55.5 58 41.4
Thhalv10000656m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 5.4e-06 55.1 67 37.3
SEGI_28867 Sequoiadendron giganteum HOM05D013116 ORTHO05D012902 5.4e-06 55.1 96 33.3
Atru.chr9.1417 Acer truncatum HOM05D000004 ORTHO05D000563 7.1e-06 54.7 56 41.1
Actinidia03258 Actinidia chinensis HOM05D057492 ORTHO05D000563 7.1e-06 54.7 97 35.1
ECA246G1906 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-06 54.7 60 41.7
Thhalv10019697m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 7.1e-06 54.7 56 44.6
PGR102G3222 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-06 54.7 57 40.4
SGA_v2.0_scaffold98G29414 Striga asiatica HOM05D012397 ORTHO05D000002 7.1e-06 54.7 56 44.6
RhsimUnG0084300 Rhododendron simsii HOM05D011528 ORTHO05D000563 9.2e-06 54.3 60 33.3
SEGI_08757 Sequoiadendron giganteum HOM05D013116 ORTHO05D009660 9.2e-06 54.3 112 31.2
SEGI_08797 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 9.2e-06 54.3 56 39.3
SEGI_23514 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 9.2e-06 54.3 83 36.1
SEGI_26381 Sequoiadendron giganteum HOM05D001575 ORTHO05D001536 9.2e-06 54.3 62 33.9


User provided reference genes

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