Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 2.7e-106 388.7 191 100.0
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 3.8e-84 315.1 227 76.2
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 4.1e-83 311.6 227 74.9
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 9.3e-59 230.7 230 57.8
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 8.7e-57 224.2 191 63.9
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 1.9e-56 223.0 203 61.1
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 4.8e-55 218.4 224 54.0
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.4e-52 207.6 203 54.7
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.5e-51 206.1 219 52.5
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 7.1e-51 204.5 216 53.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 1.0e-49 200.7 206 52.4
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 6.7e-49 198.0 184 56.0
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 3.6e-42 175.6 160 58.8
FAN11G0973 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.1e-38 162.5 152 58.6
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 6.7e-33 144.8 127 61.4
FAN03G1875 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.2e-28 129.8 130 52.3
FAN24G2086 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.5e-28 127.9 70 91.4
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 7.9e-26 121.3 189 39.7
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 9.7e-24 114.4 91 58.2
FAN18G0245 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.8e-23 112.8 147 48.3
FAN16G3103 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.3e-23 111.7 112 57.1
FAN10G2328 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.5e-21 105.9 112 56.2
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 5.9e-21 105.1 149 38.9
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 2.2e-20 103.2 70 70.0
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 5.0e-20 102.1 93 53.8
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.5e-20 101.3 90 53.3
FAN18G1459 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.5e-20 101.3 64 70.3
FAN23G0987 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.1e-19 100.9 64 70.3
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-17 94.4 92 52.2
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 6.7e-17 91.7 184 32.6
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 1.2e-16 90.9 187 35.3
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.7e-15 87.0 192 32.3
FAN28G2081 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.3e-15 85.1 88 52.3
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 8.2e-15 84.7 143 37.1
FAN22G0652 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.1e-14 84.3 57 68.4
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.1e-14 82.8 139 36.7
FAN19G0969 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.1e-14 82.4 143 37.1
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 7.7e-13 78.2 186 31.2
FvH4_4g15580 Fragaria vesca HOM05D003127 ORTHO05D003768 8.5e-12 74.7 156 35.9
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 3.2e-11 72.8 206 29.6
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.2e-11 72.8 192 29.7
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 4.2e-11 72.4 186 31.2
FAN16G0148 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.2e-11 72.4 78 52.6
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 9.4e-11 71.2 199 29.1
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 2.1e-10 70.1 175 28.0
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-10 69.7 183 29.0
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.6e-10 69.3 160 30.6
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.7e-10 68.9 196 27.0
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 6.1e-10 68.6 77 41.6
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 8.0e-10 68.2 77 41.6
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-09 67.4 72 40.3
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 1.4e-09 67.4 176 30.7
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.3e-09 66.6 196 28.1
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-09 66.2 178 27.5
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 3.0e-09 66.2 125 32.8
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-09 65.9 183 30.6
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-09 65.9 183 28.4
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-09 65.9 72 41.7
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.0e-09 65.9 174 29.9
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.2e-09 65.5 180 28.9
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.8e-09 64.7 196 26.5
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 8.8e-09 64.7 141 34.0
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 1.2e-08 64.3 189 27.5
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.2e-08 64.3 104 36.5
FvH4_6g29801 Fragaria vesca HOM05D008321 ORTHO05D003768 1.2e-08 64.3 47 59.6
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-08 63.9 182 27.5
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.5e-08 63.9 254 26.4
Oeu060777.1 Olea europaea HOM05D009091 ORTHO05D003768 2.0e-08 63.5 129 34.9
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-08 63.2 164 29.3
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.4e-08 62.8 72 38.9
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.4e-08 62.8 76 39.5
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.4e-08 62.4 187 27.8
FAN07G1237 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.4e-08 62.4 34 85.3
FAN08G3642 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.4e-08 62.4 49 49.0
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.7e-08 62.0 196 25.0
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 5.7e-08 62.0 195 25.1
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.7e-08 62.0 67 41.8
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 9.8e-08 61.2 83 36.1
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 9.8e-08 61.2 84 36.9
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 9.8e-08 61.2 255 27.1
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-07 60.8 72 38.9
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 1.7e-07 60.5 134 32.1
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.7e-07 60.5 190 28.9
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.7e-07 60.5 190 28.9
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.7e-07 60.5 190 28.9
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.7e-07 59.3 198 25.8
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 3.7e-07 59.3 76 32.9
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 4.8e-07 58.9 72 37.5
FAN13G1958 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.3e-07 58.5 69 46.4
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.1e-06 57.8 118 33.1
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-06 57.0 148 29.1
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.8e-06 57.0 71 36.6
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 2.4e-06 56.6 181 26.5
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 3.1e-06 56.2 215 25.6
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 5.4e-06 55.5 174 32.8
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 5.4e-06 55.5 80 37.5
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 7.0e-06 55.1 145 29.7
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.0e-06 55.1 69 42.0
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.1e-06 54.7 131 28.2
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 9.1e-06 54.7 66 37.9


User provided reference genes

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