Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 3.4e-43 177.9 90 100.0
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 2.9e-42 174.9 90 98.9
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 1.3e-39 166.0 85 98.8
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 6.6e-39 163.7 84 97.6
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 3.3e-38 161.4 90 90.0
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 1.2e-37 159.5 90 88.9
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.3e-34 149.4 85 87.1
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 2.9e-34 148.3 85 87.1
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 3.7e-34 147.9 85 85.9
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 8.3e-34 146.7 85 85.9
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 1.1e-33 146.4 85 84.7
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 1.4e-33 146.0 85 85.9
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.4e-33 145.2 73 100.0
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 4.1e-33 144.4 75 96.0
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.2e-32 142.9 85 84.7
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.7e-32 141.7 85 84.7
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 2.7e-32 141.7 84 83.3
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 2.7e-32 141.7 85 82.4
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 3.5e-32 141.4 85 82.4
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.5e-32 141.4 85 82.4
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 7.8e-32 140.2 85 80.0
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 7.8e-32 140.2 85 82.4
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 7.8e-32 140.2 85 84.7
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.3e-31 139.4 85 84.7
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 2.3e-31 138.7 85 80.0
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 2.3e-31 138.7 85 82.4
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 2.3e-31 138.7 85 80.0
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 2.3e-31 138.7 85 83.5
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 3.9e-31 137.9 85 80.0
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 3.9e-31 137.9 80 86.2
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 3.9e-31 137.9 87 81.6
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 6.6e-31 137.1 80 85.0
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 6.6e-31 137.1 85 80.0
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 8.6e-31 136.7 79 84.8
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 8.6e-31 136.7 81 84.0
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.1e-30 136.3 80 87.5
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 1.1e-30 136.3 80 87.5
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 1.1e-30 136.3 85 81.2
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 1.5e-30 136.0 80 83.8
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 1.9e-30 135.6 85 78.8
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.5e-30 135.2 85 77.6
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 3.3e-30 134.8 85 80.0
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 3.3e-30 134.8 85 75.3
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 4.3e-30 134.4 86 81.4
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 4.3e-30 134.4 82 80.5
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 5.6e-30 134.0 86 80.2
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 7.3e-30 133.7 86 80.2
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 9.5e-30 133.3 86 80.2
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 9.5e-30 133.3 86 80.2
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 9.5e-30 133.3 85 78.8
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 9.5e-30 133.3 85 78.8
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.2e-29 132.9 85 78.8
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 1.6e-29 132.5 86 80.2
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 1.6e-29 132.5 85 78.8
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 1.6e-29 132.5 85 78.8
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 2.1e-29 132.1 86 80.2
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 2.1e-29 132.1 85 77.6
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 2.1e-29 132.1 85 76.5
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 2.1e-29 132.1 85 75.3
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 2.1e-29 132.1 85 78.8
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 2.8e-29 131.7 86 79.1
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 2.8e-29 131.7 86 80.2
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 3.6e-29 131.3 86 79.1
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 3.6e-29 131.3 81 80.2
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 3.6e-29 131.3 81 80.2
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 8.1e-29 130.2 89 76.4
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.4e-28 129.4 86 77.9
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 8.9e-28 126.7 85 75.3
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 2.6e-27 125.2 81 79.0
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 5.8e-27 124.0 84 78.6
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 7.5e-27 123.6 86 75.6
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 8.3e-26 120.2 85 67.1
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 1.4e-25 119.4 81 75.3
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 2.4e-25 118.6 65 87.7
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 4.1e-25 117.9 81 71.6
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 7.1e-25 117.1 86 69.8
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 9.2e-25 116.7 85 65.9
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 4.6e-24 114.4 65 86.2
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 6.0e-24 114.0 84 66.7
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 7.8e-24 113.6 86 67.4
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 3.0e-23 111.7 65 83.1
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 6.6e-23 110.5 72 73.6
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 8.6e-23 110.2 80 68.8
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 1.1e-22 109.8 83 68.7
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 2.5e-22 108.6 72 73.6
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 9.5e-22 106.7 65 80.0
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.8e-21 105.1 80 70.0
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 2.8e-21 105.1 80 71.2
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.4e-20 102.8 65 76.9
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 1.4e-20 102.8 60 83.3
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 4.0e-20 101.3 74 77.0
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 5.2e-20 100.9 86 60.5
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 5.2e-20 100.9 80 67.5
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.5e-19 99.4 62 82.3
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.5e-19 99.4 76 73.7
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 2.0e-19 99.0 60 80.0
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 1.7e-18 95.9 74 66.2
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 2.9e-18 95.1 80 65.0
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 9.2e-17 90.1 82 56.1
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 3.0e-15 85.1 60 73.3
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 8.7e-15 83.6 93 52.7
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 1.8e-12 75.9 52 69.2
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 1.8e-12 75.9 83 50.6
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 3.1e-12 75.1 50 70.0
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 9.0e-12 73.6 85 56.5
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 1.5e-11 72.8 78 50.0
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 1.1e-09 66.6 57 61.4
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 7.8e-08 60.5 80 41.2
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 6.6e-07 57.4 38 71.1


User provided reference genes

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