Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2016 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-172 609.4 336 100.0
FvH4_1g00812 Fragaria vesca HOM05D003981 ORTHO05D003666 8.7e-169 597.0 339 98.2
FAN26G3326 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.1e-91 340.9 215 85.1
FAN14G0912 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.4e-32 143.3 333 34.2
FAN07G1958 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-31 141.4 321 35.5
FvH4_6g03511 Fragaria vesca HOM05D003981 ORTHO05D003666 1.7e-31 141.0 333 34.2
FAN09G1004 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-30 137.9 313 31.3
FAN15G1118 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.2e-30 135.6 323 32.8
FvH4_3g40671 Fragaria vesca HOM05D003981 ORTHO05D003666 9.4e-30 135.2 324 34.9
FAN16G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.4e-30 135.2 330 34.8
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 1.6e-29 134.4 337 35.3
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 4.6e-29 132.9 335 34.9
FAN05G2982 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.9e-29 132.1 238 34.9
FAN06G2056 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.8e-28 131.0 324 31.2
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.0e-28 130.2 322 32.3
FvH4_5g07350 Fragaria vesca HOM05D003981 ORTHO05D003666 5.1e-28 129.4 337 35.0
FAN19G2785 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-27 127.5 331 30.8
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 4.3e-27 126.3 321 32.1
FvH4_5g07510 Fragaria vesca HOM05D003981 ORTHO05D003666 5.7e-27 125.9 337 34.7
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.7e-27 125.9 321 34.3
FvH4_2g20921 Fragaria vesca HOM05D003981 ORTHO05D003666 2.2e-26 124.0 323 32.8
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 3.7e-26 123.2 310 34.2
FvH4_1g25190 Fragaria vesca HOM05D003981 ORTHO05D003666 4.8e-26 122.9 332 30.4
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.3e-26 122.5 343 32.7
FvH4_6g09911 Fragaria vesca HOM05D003981 ORTHO05D003666 1.1e-25 121.7 327 33.3
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-25 121.3 343 32.7
FAN12G2446 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.8e-25 120.9 339 32.7
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 2.4e-25 120.6 315 33.7
RcHm_v2.0_Chr3g0460411 Rosa chinensis HOM05D003981 ORTHO05D003666 9.1e-25 118.6 319 32.3
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 4.5e-24 116.3 331 32.9
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 7.7e-24 115.5 339 31.3
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 1.0e-23 115.2 285 33.3
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.2e-23 114.0 339 31.3
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 2.9e-23 113.6 327 33.0
FAN11G1242 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.0e-23 112.8 291 34.0
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 8.5e-23 112.1 309 31.1
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 8.5e-23 112.1 324 32.7
FAN10G2747 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.4e-22 111.3 235 33.2
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 1.9e-22 110.9 338 29.9
FAN01G2610 Fragaria x ananassa HOM05D001225 ORTHO05D001252 4.2e-22 109.8 239 32.6
RcHm_v2.0_Chr2g0085201 Rosa chinensis HOM05D003981 ORTHO05D003666 5.5e-22 109.4 248 32.7
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.7e-21 107.1 314 29.9
Prupe.2G095900 Prunus persica HOM05D003981 ORTHO05D003666 2.7e-21 107.1 326 30.1
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-21 106.7 329 29.5
FAN20G0367 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-21 106.7 330 30.0
Prupe.7G195100 Prunus persica HOM05D003981 ORTHO05D003666 3.6e-21 106.7 343 29.2
FAN02G1117 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-20 104.8 286 31.5
RcHm_v2.0_Chr3g0449831 Rosa chinensis HOM05D003981 ORTHO05D003666 1.4e-20 104.8 332 29.5
MD11G1006900 Malus domestica HOM05D003981 ORTHO05D003666 5.1e-20 102.8 330 32.4
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 2.0e-19 100.9 255 33.7
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-19 100.9 332 26.2
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-19 100.5 326 31.3
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 5.7e-19 99.4 332 25.9
FAN03G0829 Fragaria x ananassa HOM05D001225 ORTHO05D001252 9.7e-19 98.6 320 29.7
MD11G1006300 Malus domestica HOM05D003981 ORTHO05D003666 1.7e-18 97.8 243 34.6
Prupe.7G182200 Prunus persica HOM05D003981 ORTHO05D003666 2.8e-18 97.1 328 30.5
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 4.8e-18 96.3 232 32.3
FAN13G2076 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.8e-18 96.3 201 34.8
RcHm_v2.0_Chr4g0428611 Rosa chinensis HOM05D003981 ORTHO05D003666 6.3e-18 95.9 330 27.6
FAN14G5156 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.8e-17 94.4 182 37.9
FvH4_2g04190 Fragaria vesca HOM05D003981 ORTHO05D003666 5.3e-17 92.8 214 34.6
FvH4_1g00551 Fragaria vesca HOM05D003981 ORTHO05D003666 7.0e-17 92.4 206 32.5
RcHm_v2.0_Chr5g0016491 Rosa chinensis HOM05D003981 ORTHO05D003666 1.2e-16 91.7 337 30.6
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 1.5e-16 91.3 339 28.3
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-16 90.5 320 29.1
Prupe.3G238400 Prunus persica HOM05D003981 ORTHO05D003666 5.9e-16 89.4 329 29.8
MD12G1195000 Malus domestica HOM05D003981 ORTHO05D003666 1.0e-15 88.6 327 26.3
Prupe.2G095600 Prunus persica HOM05D003981 ORTHO05D003666 1.0e-15 88.6 311 27.0
FvH4_4g22410 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-15 88.2 317 27.8
FvH4_2g25871 Fragaria vesca HOM05D003981 ORTHO05D003666 1.7e-15 87.8 366 27.3
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 2.2e-15 87.4 193 34.2
Prupe.7G195400 Prunus persica HOM05D003981 ORTHO05D003666 3.8e-15 86.7 305 29.2
FAN08G0901 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.2e-14 83.6 327 28.1
FAN18G1682 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.2e-14 83.2 317 30.6
FAN18G3444 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.7e-13 79.7 317 25.9
FAN18G0593 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.1e-13 79.3 327 28.4
Prupe.8G061400 Prunus persica HOM05D003981 ORTHO05D003666 8.0e-13 79.0 322 25.8
FvH4_5g31171 Fragaria vesca HOM05D003981 ORTHO05D003666 1.4e-12 78.2 326 26.4
FvH4_5g06780 Fragaria vesca HOM05D003981 ORTHO05D003666 3.0e-12 77.0 327 28.1
Nn1g03296 Nelumbo nucifera HOM05D000007 ORTHO05D003666 3.9e-12 76.6 314 25.8
FAN04G1299 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-12 76.3 155 32.9
Prupe.2G095700 Prunus persica HOM05D003981 ORTHO05D003666 1.1e-11 75.1 258 27.1
FAN18G0802 Fragaria x ananassa HOM05D002662 ORTHO05D003666 2.0e-11 74.3 227 27.8
FAN09G1093 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.3e-11 73.6 86 41.9
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 7.4e-11 72.4 336 25.3
FvH4_6g47480 Fragaria vesca HOM05D003981 ORTHO05D003666 2.8e-10 70.5 313 27.5
FAN17G3075 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.8e-10 70.5 331 26.6
FAN23G0182 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.8e-10 70.5 172 33.1
FAN23G0731 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.8e-10 70.5 172 33.1
FAN23G1358 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.8e-10 70.5 172 33.1
FAN14G1511 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.8e-10 69.7 313 27.2
FAN15G2324 Fragaria x ananassa HOM05D002345 ORTHO05D002391 1.4e-09 68.2 325 26.8
FAN09G0546 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-09 67.4 330 27.9
FAN19G2493 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-09 67.4 157 31.2
FvH4_1g00570 Fragaria vesca HOM05D003981 ORTHO05D003666 3.1e-09 67.0 164 30.5
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 4.1e-09 66.6 329 26.1
MD11G1005600 Malus domestica HOM05D003981 ORTHO05D003666 7.0e-09 65.9 200 30.5
FAN08G0629 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-08 64.7 222 30.2
FAN18G2397 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-08 64.3 325 26.8
FAN05G1092 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-08 63.9 85 44.7
FAN14G0149 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-08 63.9 169 30.2
FAN14G2642 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-08 63.9 169 30.2
FAN14G5028 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-08 63.9 85 44.7
FAN26G0221 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.5e-08 63.5 81 42.0
Atru.chr5.2443 Acer truncatum HOM05D003981 ORTHO05D003666 4.5e-08 63.2 192 26.0
Actinidia06940 Actinidia chinensis HOM05D003981 ORTHO05D003666 4.5e-08 63.2 196 31.1
FvH4_3g13181 Fragaria vesca HOM05D003981 ORTHO05D003666 5.9e-08 62.8 88 39.8
Ciclev10030374m.g Citrus clementina HOM05D003981 ORTHO05D003666 7.7e-08 62.4 80 38.8
FAN02G3644 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.7e-08 62.4 169 30.2
TWI59G0221 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 7.7e-08 62.4 318 24.2
Atru.chr5.2441 Acer truncatum HOM05D003981 ORTHO05D003666 1.0e-07 62.0 192 26.0
Atru.chr9.1609 Acer truncatum HOM05D003981 ORTHO05D003666 1.7e-07 61.2 177 28.8
FAN05G1423 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-07 61.2 77 45.5
FvH4_6g47440 Fragaria vesca HOM05D003981 ORTHO05D003666 5.0e-07 59.7 222 27.0
FAN27G2648 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.0e-07 59.7 84 46.4
FAN26G0569 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.5e-07 59.3 151 34.4
Ciclev10006577m.g Citrus clementina HOM05D003981 ORTHO05D003666 8.5e-07 58.9 223 27.8
FAN02G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.5e-07 58.9 222 26.6
QL07p033575 Quercus lobata HOM05D000007 ORTHO05D003666 1.1e-06 58.5 322 25.5
FvH4_1g00700 Fragaria vesca HOM05D003981 ORTHO05D003666 1.5e-06 58.2 143 30.8
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 1.5e-06 58.2 273 26.4
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 2.5e-06 57.4 308 24.0
Duzib268G1639 Durio zibethinus HOM05D000007 ORTHO05D000017 4.2e-06 56.6 311 24.1
FAN13G0559 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.2e-06 55.8 189 31.2
HanXRQChr13g0419481 Helianthus annuus HOM05D000007 ORTHO05D003666 9.4e-06 55.5 323 22.9
TWI59G1434 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 9.4e-06 55.5 190 26.3


User provided reference genes

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