Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 8.2e-282 973.0 475 100.0
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 7.2e-270 933.3 475 95.6
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.8e-253 878.2 475 92.0
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 4.1e-249 864.4 475 90.7
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 6.8e-244 847.0 475 87.2
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 2.9e-218 761.9 474 77.0
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 3.5e-216 755.0 476 76.9
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 3.1e-196 688.7 474 69.8
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 5.0e-194 681.4 472 69.5
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 2.2e-189 666.0 483 67.9
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 6.9e-188 661.0 482 68.3
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 6.5e-186 654.4 469 67.0
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 1.1e-185 653.7 475 66.3
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 3.2e-185 652.1 472 66.9
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 3.2e-185 652.1 475 66.1
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 3.6e-184 648.7 477 66.5
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 1.0e-183 647.1 472 65.9
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 1.8e-183 646.4 482 67.2
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 1.3e-181 640.2 478 65.7
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 2.8e-181 639.0 473 66.2
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 2.6e-179 632.5 469 65.9
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 2.9e-178 629.0 478 65.7
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.4e-177 626.7 478 65.1
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 3.0e-175 619.0 477 64.8
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 2.0e-174 616.3 472 64.6
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 3.3e-174 615.5 484 63.6
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 9.7e-174 614.0 473 65.8
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 1.4e-172 610.1 481 63.2
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 3.1e-172 609.0 477 63.3
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 3.1e-172 609.0 480 62.5
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 7.0e-172 607.8 469 64.8
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 1.0e-170 604.0 472 61.2
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 6.5e-170 601.3 487 62.4
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 6.5e-170 601.3 474 62.2
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 1.5e-169 600.1 470 60.6
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.5e-169 600.1 475 62.5
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 1.9e-169 599.7 469 64.4
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 9.4e-169 597.4 468 60.9
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.0e-167 594.0 473 61.9
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 2.3e-167 592.8 477 61.0
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 2.6e-166 589.3 472 60.6
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 4.4e-166 588.6 486 60.9
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 2.2e-165 586.3 529 57.3
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 5.9e-163 578.2 471 59.7
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 1.3e-162 577.0 478 59.0
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 1.3e-162 577.0 478 59.0
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 1.3e-162 577.0 476 60.9
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 3.8e-162 575.5 476 60.5
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 1.5e-161 573.5 479 59.7
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 1.5e-161 573.5 470 59.1
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 1.9e-161 573.2 499 57.9
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 1.9e-161 573.2 505 57.0
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 2.5e-161 572.8 481 58.8
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 3.2e-161 572.4 476 58.0
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 2.1e-160 569.7 478 59.6
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.1e-160 569.7 472 59.7
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 2.7e-160 569.3 473 58.8
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 4.7e-160 568.5 471 58.4
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 4.7e-160 568.5 471 58.2
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 4.7e-160 568.5 471 59.0
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 4.7e-160 568.5 508 54.5
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 1.0e-159 567.4 477 58.9
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 1.0e-159 567.4 473 59.2
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 1.4e-159 567.0 471 58.0
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 1.4e-159 567.0 471 58.0
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 1.4e-159 567.0 472 58.9
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 2.3e-159 566.2 426 65.3
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 2.3e-159 566.2 478 59.8
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 5.2e-159 565.1 484 59.5
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 1.5e-158 563.5 481 60.3
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.7e-158 561.6 473 58.6
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 9.8e-158 560.8 469 60.1
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 1.4e-156 557.0 480 58.8
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 2.0e-155 553.1 474 58.0
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 3.5e-155 552.4 509 56.4
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 1.5e-153 547.0 476 57.1
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 3.0e-151 539.3 429 64.1
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 3.0e-151 539.3 479 58.0
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 4.0e-151 538.9 484 58.1
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 2.0e-150 536.6 475 56.6
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 5.7e-150 535.0 475 57.5
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 1.3e-149 533.9 471 57.5
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.2e-149 533.1 504 54.6
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 5.9e-147 525.0 498 53.6
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 1.9e-145 520.0 484 57.0
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 1.7e-138 496.9 459 55.1
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 4.0e-135 485.7 437 55.4
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 2.9e-133 479.6 366 66.4
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 6.4e-133 478.4 463 49.7
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.4e-132 477.2 353 66.6
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.1e-129 467.6 500 50.2
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 3.1e-127 459.5 404 57.7
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.5e-126 457.2 362 63.0
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 2.0e-126 456.8 410 56.8
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 5.8e-126 455.3 338 65.1
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 1.5e-121 440.7 473 50.5
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 1.2e-112 411.0 513 40.7
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 9.9e-110 401.4 384 51.8
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 1.7e-101 374.0 495 40.8
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 5.4e-100 369.0 475 40.4
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 2.7e-99 366.7 298 62.1
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 2.1e-96 357.1 478 38.7
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 1.3e-93 347.8 356 52.0
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.5e-89 334.3 473 38.5
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 4.0e-87 326.2 443 41.3
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 2.2e-77 293.9 469 37.7
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 6.7e-58 229.2 265 44.9
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 6.3e-56 222.6 242 52.5
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 2.1e-51 207.6 477 29.6
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 9.1e-47 192.2 278 38.5
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.2e-40 171.0 253 36.0
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 3.7e-40 170.2 504 28.4
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.7e-37 161.4 162 53.1
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 8.6e-37 159.1 162 51.9
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 5.9e-30 136.3 78 83.3
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 1.4e-23 115.2 111 56.8
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 4.6e-22 110.2 817 20.4
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 1.3e-21 108.6 91 51.6
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 1.2e-19 102.1 68 67.6
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.1e-18 99.0 115 43.5
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 4.1e-15 87.0 117 41.9
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 4.3e-12 77.0 86 44.2
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.4e-10 72.0 48 66.7


User provided reference genes

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