Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.2e-128 461.1 234 100.0
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.0e-124 449.1 234 97.9
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 7.7e-124 447.2 234 97.4
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.7e-123 446.0 234 97.9
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.7e-121 438.0 234 96.2
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 1.9e-109 399.4 234 89.7
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 3.3e-82 308.9 247 70.0
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.5e-79 300.1 245 68.2
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 2.6e-79 299.3 245 67.8
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 6.2e-73 278.1 233 66.5
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.1e-72 277.3 235 66.4
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 2.4e-72 276.2 240 61.2
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 5.3e-72 275.0 253 62.8
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 9.0e-72 274.2 236 64.4
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.2e-71 273.9 248 60.5
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 2.6e-71 272.7 252 58.7
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.8e-71 271.6 219 67.1
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 1.7e-70 270.0 243 61.3
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 3.8e-70 268.9 257 59.1
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 6.4e-70 268.1 246 60.2
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 6.4e-70 268.1 241 60.2
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 1.1e-69 267.3 238 61.3
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.1e-69 267.3 242 59.9
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.9e-69 266.5 241 61.8
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 3.2e-69 265.8 230 60.9
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 5.5e-69 265.0 234 62.4
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 5.5e-69 265.0 232 61.6
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.6e-68 263.5 226 63.7
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 2.1e-68 263.1 240 60.4
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 3.5e-68 262.3 244 60.2
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 7.9e-68 261.2 228 59.2
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 7.9e-68 261.2 239 60.3
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.3e-67 260.4 244 60.7
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 6.7e-67 258.1 222 62.2
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.5e-66 256.9 236 59.3
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.5e-66 256.9 238 61.3
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 3.3e-66 255.8 238 60.9
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 3.3e-66 255.8 243 59.3
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 5.6e-66 255.0 238 60.1
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 5.6e-66 255.0 238 61.3
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 7.4e-66 254.6 222 62.2
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.3e-65 253.8 209 62.7
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.6e-65 253.4 232 59.1
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 6.2e-65 251.5 234 56.4
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 9.0e-64 247.7 245 58.8
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 2.6e-63 246.1 244 59.0
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 7.6e-63 244.6 245 58.4
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 2.2e-62 243.0 241 60.2
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 2.2e-62 243.0 210 60.5
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 2.2e-62 243.0 246 54.1
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 2.9e-62 242.7 248 57.7
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 1.4e-61 240.4 238 55.5
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 4.2e-61 238.8 233 55.4
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 5.5e-61 238.4 242 57.0
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 7.1e-61 238.0 224 58.9
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 1.6e-60 236.9 226 56.6
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 3.5e-60 235.7 221 59.7
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 6.0e-60 235.0 240 56.2
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 1.0e-59 234.2 243 56.0
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.0e-59 232.6 245 54.7
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 5.1e-59 231.9 217 59.9
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 6.7e-59 231.5 238 55.0
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.5e-58 230.3 249 51.4
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 3.3e-58 229.2 244 54.5
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.6e-58 227.6 219 54.8
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 2.8e-57 226.1 234 51.7
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 2.8e-57 226.1 234 51.7
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 3.7e-57 225.7 251 49.8
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 1.1e-56 224.2 236 52.1
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 1.4e-56 223.8 233 50.6
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 3.1e-56 222.6 245 53.1
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 5.3e-56 221.9 247 53.4
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 9.0e-56 221.1 235 52.8
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 1.2e-55 220.7 232 52.2
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 3.4e-55 219.2 230 51.7
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 3.4e-55 219.2 232 52.6
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.4e-55 219.2 239 52.3
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 3.4e-55 219.2 233 49.8
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.4e-55 219.2 213 56.3
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 5.9e-55 218.4 250 50.8
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 7.6e-55 218.0 220 58.2
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 1.0e-54 217.6 239 51.5
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 2.9e-54 216.1 213 56.8
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 6.5e-54 214.9 244 50.4
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 8.5e-54 214.5 212 59.0
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.4e-53 213.8 228 50.9
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 1.9e-53 213.4 239 51.9
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 1.9e-53 213.4 239 51.0
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 4.2e-53 212.2 204 55.9
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 9.3e-53 211.1 232 53.0
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 9.3e-53 211.1 232 53.0
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 1.6e-52 210.3 234 54.3
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.6e-52 210.3 241 48.1
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.6e-52 210.3 221 52.0
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 2.1e-52 209.9 234 52.6
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.1e-52 209.9 243 49.8
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.7e-52 209.5 215 52.1
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.0e-51 207.6 234 52.1
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 6.7e-51 204.9 202 55.9
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 6.7e-51 204.9 170 61.2
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.4e-48 197.2 187 57.8
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 4.1e-48 195.7 196 55.6
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 1.2e-47 194.1 224 48.2
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 1.2e-47 194.1 268 45.1
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 5.9e-47 191.8 278 45.7
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 2.2e-46 189.9 280 46.4
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.2e-46 189.9 251 44.6
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 5.0e-46 188.7 238 48.7
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 1.1e-45 187.6 244 47.1
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 4.2e-45 185.7 187 51.9
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 7.2e-45 184.9 204 50.5
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.5e-42 177.2 187 53.5
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 1.3e-41 174.1 187 52.9
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 1.3e-41 174.1 187 52.9
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.3e-41 174.1 187 52.4
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 2.8e-41 172.9 179 53.6
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 8.2e-41 171.4 196 52.0
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 7.2e-37 158.3 162 53.7
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.6e-36 157.1 231 44.2
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 3.9e-35 152.5 217 42.4
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 1.4e-32 144.1 215 40.9
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 2.0e-26 123.6 160 49.4
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 1.7e-25 120.6 228 33.8
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 5.3e-24 115.5 241 38.2
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 2.2e-22 110.2 160 47.5
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 4.7e-20 102.4 89 61.8
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.7e-15 86.7 177 36.7
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 7.7e-15 85.1 112 45.5
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.4e-08 64.3 207 25.6
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 3.1e-08 63.2 149 36.2
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 1.6e-07 60.8 57 56.1
Pp3c15_7400 Physcomitrium patens HOM05D000098 ORTHO05D000523 3.5e-07 59.7 91 36.3


User provided reference genes

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