Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.6e-120 436.0 214 100.0
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.8e-112 408.7 214 95.8
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 3.1e-111 405.2 214 93.5
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.7e-104 381.7 214 90.2
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.2e-94 350.1 215 83.3
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 3.5e-62 242.3 214 62.1
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 3.5e-54 215.7 217 56.7
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 4.2e-52 208.8 221 53.8
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 8.3e-48 194.5 231 48.9
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 9.5e-44 181.0 229 45.9
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 4.0e-42 175.6 226 48.7
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.0e-42 175.6 237 47.3
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 5.2e-42 175.3 212 48.6
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 1.5e-41 173.7 230 46.5
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.4e-41 172.2 237 46.0
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 9.8e-41 171.0 209 47.8
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 2.2e-40 169.9 223 48.0
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 2.9e-40 169.5 246 42.3
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 8.3e-40 167.9 225 44.9
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 1.8e-39 166.8 215 47.9
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 2.4e-39 166.4 218 46.3
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 2.4e-39 166.4 225 46.2
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 4.1e-39 165.6 233 45.1
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 9.2e-39 164.5 244 43.0
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 1.2e-38 164.1 204 47.5
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 1.3e-37 160.6 175 54.3
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 2.3e-37 159.8 234 44.9
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 3.0e-37 159.5 207 47.8
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 5.0e-37 158.7 213 45.1
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 5.0e-37 158.7 223 45.7
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 5.0e-37 158.7 219 46.6
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 8.6e-37 157.9 233 44.6
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 1.5e-36 157.1 224 41.5
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.9e-36 156.8 213 43.7
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 5.6e-36 155.2 224 44.2
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 6.2e-35 151.8 220 43.2
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 6.2e-35 151.8 283 38.9
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 1.0e-34 151.0 210 44.8
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 1.0e-34 151.0 206 44.2
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.8e-34 150.2 205 43.9
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 3.1e-34 149.4 164 52.4
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 3.1e-34 149.4 228 44.7
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 6.8e-34 148.3 219 43.4
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 6.8e-34 148.3 219 43.4
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 1.5e-33 147.1 165 50.9
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 1.5e-33 147.1 193 47.2
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 2.0e-33 146.7 220 42.3
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 3.4e-33 146.0 219 43.8
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 3.4e-33 146.0 210 44.3
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 4.4e-33 145.6 217 43.3
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 7.5e-33 144.8 206 42.7
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 1.3e-32 144.1 219 43.4
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.7e-32 143.7 179 44.7
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 2.9e-32 142.9 223 41.3
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 3.7e-32 142.5 214 44.4
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 4.9e-32 142.1 229 37.6
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 1.1e-31 141.0 265 36.6
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 1.9e-31 140.2 230 42.2
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.9e-31 140.2 143 53.8
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 3.2e-31 139.4 216 41.2
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 5.4e-31 138.7 210 43.3
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 2.0e-30 136.7 99 65.7
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 3.5e-30 136.0 221 38.5
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 3.5e-30 136.0 210 42.9
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 6.0e-30 135.2 232 41.8
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 6.0e-30 135.2 215 42.8
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 1.0e-29 134.4 195 43.1
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 1.3e-29 134.0 239 39.7
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.3e-29 134.0 238 41.6
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 1.7e-29 133.7 247 38.1
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 2.3e-29 133.3 219 41.6
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 3.0e-29 132.9 211 41.2
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 8.6e-29 131.3 195 44.6
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.5e-28 130.6 189 43.4
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 3.3e-28 129.4 215 40.9
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 7.3e-28 128.3 101 62.4
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 9.5e-28 127.9 247 36.0
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.2e-27 127.5 167 46.7
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 2.1e-27 126.7 129 54.3
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 2.3e-26 123.2 179 43.0
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 6.8e-26 121.7 230 38.7
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 2.0e-25 120.2 228 38.2
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 2.0e-25 120.2 228 38.2
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 5.8e-25 118.6 160 45.6
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 7.5e-25 118.2 206 35.4
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 7.5e-25 118.2 206 35.4
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.3e-24 117.5 99 58.6
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 1.3e-24 117.5 173 41.6
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 4.9e-24 115.5 94 53.2
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 1.9e-23 113.6 89 59.6
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 4.6e-22 109.0 233 35.6
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-21 107.8 96 53.1
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 5.6e-20 102.1 125 44.8
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 7.3e-20 101.7 208 35.6
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 1.2e-19 100.9 137 42.3
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 1.8e-18 97.1 126 42.9
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 3.4e-17 92.8 188 33.0
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 2.3e-13 80.1 72 51.4
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 3.0e-13 79.7 75 50.7
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 3.0e-13 79.7 208 29.3
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 2.5e-12 76.6 64 51.6
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 1.6e-11 73.9 81 43.2
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 1.8e-10 70.5 185 30.3


User provided reference genes

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