Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 0.0e+00 1432.9 826 100.0
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 0.0e+00 1141.7 651 96.8
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 0.0e+00 1119.8 649 93.7
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 0.0e+00 1106.7 651 95.2
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 2.9e-298 1028.5 649 89.2
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 5.3e-252 874.8 669 74.3
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 1.8e-239 833.2 672 74.3
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 7.0e-228 794.7 670 69.0
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 9.1e-228 794.3 670 67.5
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 1.6e-227 793.5 670 68.7
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.0e-218 764.2 667 66.6
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 2.1e-216 756.5 668 65.9
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 1.0e-215 754.2 668 67.5
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 1.8e-215 753.4 658 66.1
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 8.9e-215 751.1 666 63.7
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 1.5e-214 750.4 661 63.1
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 3.7e-213 745.7 669 62.9
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 9.2e-212 741.1 646 61.0
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 3.8e-210 735.7 674 67.1
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 5.0e-210 735.3 672 62.2
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 1.4e-207 727.2 676 66.0
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 4.4e-206 722.2 675 60.6
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 3.2e-204 716.1 645 62.9
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 2.0e-203 713.4 599 64.6
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 2.3e-202 709.9 672 64.3
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 1.1e-201 707.6 549 71.9
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 1.1e-201 707.6 691 59.5
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 7.3e-201 704.9 657 60.4
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.4e-199 700.7 614 63.2
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 1.8e-199 700.3 657 61.5
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 5.2e-199 698.7 669 62.2
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 2.0e-198 696.8 608 64.1
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 7.5e-198 694.9 670 57.6
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 7.5e-198 694.9 663 62.6
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 9.8e-198 694.5 613 63.3
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 1.3e-197 694.1 619 66.1
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 1.7e-197 693.7 690 60.7
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 3.7e-197 692.6 677 61.6
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 8.3e-197 691.4 619 63.3
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 5.4e-196 688.7 598 64.2
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 5.4e-196 688.7 618 61.5
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 1.6e-195 687.2 670 62.1
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 2.7e-195 686.4 617 62.2
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 6.0e-195 685.3 673 57.4
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 1.0e-194 684.5 636 61.9
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 1.3e-194 684.1 607 66.4
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 3.9e-194 682.6 665 58.8
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 6.6e-194 681.8 604 63.4
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 1.1e-193 681.0 682 58.9
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 1.1e-193 681.0 664 61.1
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 1.5e-193 680.6 631 62.1
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 1.2e-192 677.6 632 59.0
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 2.3e-191 673.3 666 60.7
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 3.1e-191 672.9 658 63.5
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 4.0e-191 672.5 643 63.3
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.2e-190 671.0 666 56.9
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 4.4e-190 669.1 681 61.8
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 2.9e-189 666.4 681 61.5
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 6.4e-189 665.2 599 66.8
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 1.4e-188 664.1 670 59.1
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 2.1e-187 660.2 678 61.2
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 2.7e-187 659.8 673 59.1
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 3.9e-186 656.0 643 58.6
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 6.6e-186 655.2 671 58.9
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 7.3e-185 651.7 599 65.9
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 1.6e-184 650.6 672 57.6
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 6.8e-183 645.2 605 61.3
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 6.8e-183 645.2 595 64.4
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.2e-182 644.4 601 64.9
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 4.4e-182 642.5 621 60.7
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 9.9e-182 641.3 652 55.7
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 1.7e-181 640.6 619 61.2
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 1.1e-180 637.9 620 60.5
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 4.2e-180 636.0 466 76.6
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 2.1e-179 633.6 599 61.4
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 7.8e-179 631.7 577 61.4
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 3.9e-178 629.4 665 58.5
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 8.7e-178 628.2 624 59.3
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 5.6e-177 625.5 598 57.0
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 2.1e-176 623.6 592 57.8
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 4.7e-176 622.5 616 62.5
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 1.4e-175 620.9 596 62.2
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 2.4e-175 620.2 539 70.7
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 9.9e-174 614.8 564 61.0
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 1.1e-172 611.3 625 61.1
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 3.2e-172 609.8 604 59.4
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 7.1e-172 608.6 602 60.6
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.3e-170 604.4 595 58.2
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 3.9e-170 602.8 597 61.0
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.5e-166 590.9 546 59.5
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 3.2e-164 583.2 606 57.6
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 1.8e-162 577.4 450 70.7
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 6.9e-159 565.5 617 56.2
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 7.9e-147 525.4 567 52.2
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 9.7e-145 518.5 661 49.2
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 3.2e-140 503.4 553 54.2
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 1.4e-135 488.0 587 48.4
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 5.7e-113 412.9 617 46.0
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 1.5e-97 361.7 296 62.5
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 5.8e-73 280.0 446 41.5
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 5.8e-73 280.0 446 41.5
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 1.3e-61 242.3 462 39.4
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 5.3e-50 203.8 437 32.5
FAN15G1956 Fragaria x ananassa HOM05D006782 ORTHO05D008366 1.2e-33 149.4 168 49.4
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.2e-25 122.9 141 49.6
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 9.4e-23 113.2 195 37.4
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 5.3e-18 97.4 149 43.0
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 1.3e-16 92.8 145 42.8
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 1.9e-15 89.0 216 29.6
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.8e-13 82.4 105 42.9
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 6.3e-11 73.9 129 34.9
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.1e-10 73.2 99 46.5
FAN16G1248 Fragaria x ananassa HOM05D006782 ORTHO05D203357 2.4e-10 72.0 84 47.6
FAN05G0998 Fragaria x ananassa HOM05D001682 ORTHO05D001625 1.6e-09 69.3 139 38.1
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 7.7e-09 67.0 121 29.8
FAN27G1533 Fragaria x ananassa HOM05D031187 ORTHO05D202152 1.7e-08 65.9 37 73.0
FAN16G0063 Fragaria x ananassa HOM05D001060 ORTHO05D000905 2.9e-08 65.1 37 78.4
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 6.5e-08 63.9 60 45.0
FAN02G2485 Fragaria x ananassa HOM05D012783 ORTHO05D008366 1.9e-07 62.4 51 62.7
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 5.5e-07 60.8 108 40.7
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 7.2e-07 60.5 47 46.8


User provided reference genes

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