Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.0e-181 637.1 310 100.0
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.9e-166 587.8 289 97.9
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 1.1e-165 586.6 289 97.6
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.2e-165 585.1 289 97.6
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.0e-163 578.6 289 96.9
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 2.2e-158 562.4 289 93.8
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 2.7e-140 502.3 289 82.0
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 3.9e-139 498.4 291 81.8
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 7.6e-135 484.2 293 81.2
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 4.9e-134 481.5 295 78.6
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 6.4e-134 481.1 292 80.1
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 5.4e-133 478.0 290 79.3
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 6.0e-132 474.6 299 75.3
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.7e-131 473.0 292 78.1
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 2.3e-131 472.6 291 78.4
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 5.1e-131 471.5 298 76.2
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 5.1e-131 471.5 285 78.9
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.9e-130 469.5 298 75.8
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 2.8e-129 465.7 299 75.3
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 2.8e-129 465.7 289 76.8
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 4.8e-129 464.9 288 76.7
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 4.8e-129 464.9 289 77.2
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 1.4e-128 463.4 292 77.7
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 1.8e-128 463.0 299 74.6
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 2.4e-128 462.6 288 76.0
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 2.4e-128 462.6 298 74.8
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 3.1e-128 462.2 288 77.1
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 3.1e-128 462.2 296 75.7
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 4.0e-128 461.8 304 74.7
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 1.2e-127 460.3 298 74.2
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 5.8e-127 458.0 290 75.2
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 7.6e-127 457.6 292 75.3
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 7.6e-127 457.6 287 77.7
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 7.6e-127 457.6 287 77.7
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.7e-126 456.4 290 74.8
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 2.2e-126 456.1 294 74.8
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 4.9e-126 454.9 309 71.5
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 1.9e-125 453.0 287 76.7
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 2.4e-125 452.6 283 76.7
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 5.4e-125 451.4 305 71.5
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 1.2e-124 450.3 290 74.5
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.2e-124 450.3 292 73.6
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 2.7e-124 449.1 281 76.9
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.0e-123 447.2 288 74.3
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 1.8e-123 446.4 299 71.9
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 3.9e-123 445.3 290 73.4
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.1e-122 443.7 296 72.0
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 5.6e-122 441.4 294 70.7
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 1.6e-121 439.9 280 74.3
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 1.1e-120 437.2 288 73.3
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 3.1e-120 435.6 287 73.5
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.3e-118 430.3 289 68.9
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 8.4e-118 427.6 299 69.2
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 3.2e-117 425.6 289 70.2
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 4.6e-116 421.8 289 70.9
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 7.9e-116 421.0 289 69.2
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 6.7e-115 417.9 294 68.4
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 6.7e-115 417.9 283 68.2
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 3.3e-114 415.6 290 67.9
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 4.3e-114 415.2 303 65.3
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 2.1e-113 412.9 294 69.7
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 2.8e-113 412.5 287 67.6
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 8.2e-113 411.0 287 67.6
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 1.4e-112 410.2 291 66.0
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.8e-112 409.8 294 65.3
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 3.1e-112 409.1 294 66.7
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 4.0e-112 408.7 287 67.9
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 4.0e-112 408.7 303 64.7
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 9.0e-112 407.5 287 66.9
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 9.0e-112 407.5 273 69.6
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.2e-111 407.1 279 68.5
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 2.6e-111 406.0 300 65.3
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 3.4e-111 405.6 289 66.4
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 4.5e-111 405.2 283 67.5
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 4.5e-111 405.2 291 64.9
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 7.6e-111 404.4 294 64.3
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.0e-110 404.1 291 64.9
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.3e-110 403.7 291 65.3
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.3e-110 403.7 291 64.6
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 1.7e-110 403.3 294 63.9
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 2.9e-110 402.5 290 65.5
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 2.9e-110 402.5 291 64.6
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 2.9e-110 402.5 291 64.9
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 2.9e-110 402.5 286 65.7
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 4.9e-110 401.7 258 74.4
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 4.9e-110 401.7 282 67.0
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 8.4e-110 401.0 281 68.0
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 7.1e-109 397.9 290 66.9
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 6.0e-108 394.8 298 63.8
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 7.9e-108 394.4 280 65.7
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.3e-107 392.9 283 65.7
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 1.1e-106 390.6 290 64.5
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.9e-106 389.8 286 65.0
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 1.6e-105 386.7 282 64.9
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 2.4e-104 382.9 285 64.2
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 1.0e-99 367.5 356 52.5
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 1.3e-99 367.1 294 62.2
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.8e-99 366.7 292 59.9
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.3e-97 360.5 293 66.2
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.8e-91 340.1 277 55.2
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 4.1e-88 328.9 292 55.8
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.5e-87 327.0 294 55.4
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 5.0e-86 322.0 241 63.9
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 8.2e-81 304.7 279 54.5
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 2.5e-77 293.1 273 53.8
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 9.4e-77 291.2 180 76.7
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 7.5e-74 281.6 293 54.3
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 5.9e-71 271.9 261 51.3
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 7.7e-71 271.6 284 46.5
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 2.5e-69 266.5 251 51.4
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 5.5e-69 265.4 160 78.1
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 3.6e-68 262.7 220 54.1
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 6.8e-67 258.5 188 67.0
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 2.8e-65 253.1 190 62.6
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 3.7e-65 252.7 168 70.2
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 5.4e-64 248.8 161 70.8
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.3e-62 244.2 288 46.2
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.3e-62 244.2 288 46.2
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 3.5e-55 219.5 235 46.8
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.6e-52 210.7 162 62.3
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.0e-46 189.1 144 64.6
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 4.0e-43 179.5 120 73.3
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 4.0e-43 179.5 128 71.1
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 6.0e-39 165.6 98 75.5
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.5e-21 107.1 208 32.2
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 7.8e-15 85.5 78 59.0


User provided reference genes

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