Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 0.0e+00 1295.4 679 100.0
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 0.0e+00 1266.5 679 98.7
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 0.0e+00 1252.3 679 97.8
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 0.0e+00 1205.3 681 94.1
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.6e-291 1005.7 679 82.5
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 6.7e-285 983.8 696 78.4
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 7.3e-183 644.8 731 54.4
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 5.1e-176 622.1 661 58.4
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 1.3e-139 501.1 722 45.7
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.0e-131 474.9 777 42.1
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 6.5e-131 472.2 722 43.1
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 8.5e-131 471.9 717 44.1
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 3.6e-129 466.5 743 43.2
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 5.7e-127 459.1 700 44.4
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 6.3e-126 455.7 723 42.2
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.1e-125 454.9 720 42.2
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 2.7e-124 450.3 727 41.5
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.9e-122 444.1 707 42.9
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 7.2e-122 442.2 749 42.6
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 1.7e-118 431.0 741 40.8
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 2.2e-118 430.6 743 40.4
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 2.8e-118 430.3 726 41.0
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 2.4e-117 427.2 721 40.5
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 2.9e-115 420.2 752 38.4
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 3.3e-114 416.8 740 37.7
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.2e-113 414.8 698 42.4
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 2.1e-113 414.1 728 40.5
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 2.1e-113 414.1 704 40.8
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 4.7e-113 412.9 724 40.2
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 6.1e-113 412.5 576 44.8
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 1.0e-112 411.8 729 40.2
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 1.4e-112 411.4 675 41.3
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 1.8e-112 411.0 708 40.5
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.5e-111 407.9 720 41.2
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 8.3e-110 402.1 729 40.5
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 8.3e-110 402.1 729 40.5
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 3.5e-108 396.7 702 40.2
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 1.7e-107 394.4 697 39.2
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 4.3e-106 389.8 717 40.9
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 1.6e-105 387.9 690 39.6
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 1.0e-104 385.2 916 34.3
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 6.8e-104 382.5 564 42.9
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 1.5e-103 381.3 717 38.9
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 2.6e-103 380.6 758 38.4
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 4.9e-102 376.3 709 38.5
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 8.3e-102 375.6 661 39.0
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 6.6e-99 365.9 733 37.5
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 8.6e-99 365.5 732 37.6
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.5e-98 364.8 723 37.6
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 2.5e-98 364.0 700 39.0
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 3.6e-97 360.1 719 37.8
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 3.6e-97 360.1 719 37.8
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 3.6e-97 360.1 719 37.8
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 6.8e-96 355.9 714 36.6
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 5.8e-95 352.8 645 38.3
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 1.3e-94 351.7 620 38.7
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.7e-94 351.3 717 36.4
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 8.3e-94 349.0 724 36.7
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 4.1e-93 346.7 645 38.3
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 9.2e-93 345.5 626 39.0
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 1.2e-92 345.1 865 32.6
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 2.5e-90 337.4 656 37.5
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 7.3e-90 335.9 467 43.3
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 9.5e-90 335.5 705 35.6
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 1.8e-88 331.3 716 34.4
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 5.2e-88 329.7 817 33.5
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 3.4e-87 327.0 655 35.6
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 1.3e-86 325.1 620 37.1
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 1.3e-86 325.1 725 35.2
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 1.3e-86 325.1 654 35.8
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 2.9e-86 323.9 739 35.0
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 3.7e-86 323.6 659 36.1
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 9.2e-85 318.9 642 36.8
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 1.2e-84 318.5 774 33.1
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 4.6e-84 316.6 680 37.1
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.0e-83 315.5 585 37.8
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 2.3e-83 314.3 329 56.2
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 2.5e-82 310.8 687 36.8
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 1.2e-81 308.5 689 34.8
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.2e-78 297.7 733 32.7
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 3.2e-77 293.9 314 54.5
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 1.3e-75 288.5 699 34.6
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 6.9e-72 276.2 564 36.9
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 3.9e-67 260.4 734 31.7
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 6.6e-67 259.6 702 31.6
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 2.1e-60 238.0 641 32.9
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 5.3e-56 223.4 278 48.2
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 6.9e-56 223.0 270 46.3
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 1.1e-53 215.7 226 51.8
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 5.5e-53 213.4 411 38.2
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 1.9e-45 188.3 493 30.8
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 9.4e-37 159.5 152 60.5
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 4.6e-36 157.1 690 25.7
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 2.2e-33 148.3 517 28.6
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.5e-31 142.1 416 30.0
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 2.6e-31 141.4 498 30.5
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 2.9e-30 137.9 378 29.9
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 9.4e-29 132.9 161 49.7
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 3.6e-28 131.0 309 34.0
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.4e-27 129.0 334 32.0
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.3e-27 128.3 117 60.7
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 3.3e-26 124.4 158 47.5
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 2.4e-24 118.2 223 38.6
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 3.1e-24 117.9 133 55.6
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 1.2e-20 105.9 275 29.5
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 6.1e-20 103.6 315 29.8
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 1.4e-19 102.4 634 23.0
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 1.2e-12 79.3 133 34.6
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 1.8e-11 75.5 333 26.7
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.3e-11 75.1 91 42.9
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 1.7e-09 68.9 187 27.8
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 3.7e-09 67.8 164 35.4
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 1.4e-08 65.9 621 22.2
Os02g0128300 Oryza sativa ssp. japonica HOM05D006140 ORTHO05D007834 2.9e-06 58.2 148 26.4


User provided reference genes

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