Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.1e-35 154.5 240 100.0
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.2e-33 146.7 108 98.1
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.8e-33 146.0 107 98.1
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.5e-33 145.2 108 97.2
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 8.4e-33 144.8 108 97.2
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 1.1e-27 127.9 108 87.0
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 9.1e-19 98.2 111 73.0
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.3e-17 94.4 111 72.1
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.3e-17 94.4 108 63.0
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 3.2e-16 89.7 105 69.5
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 7.2e-16 88.6 108 65.7
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 7.2e-16 88.6 108 63.9
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 9.4e-16 88.2 112 47.3
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 9.4e-16 88.2 112 47.3
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 9.4e-16 88.2 112 47.3
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 9.4e-16 88.2 108 62.0
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 9.4e-16 88.2 108 63.9
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.2e-15 87.8 113 62.8
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 1.2e-15 87.8 110 71.8
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 1.2e-15 87.8 108 50.9
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 2.1e-15 87.0 105 68.6
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.1e-15 87.0 106 63.2
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 2.7e-15 86.7 108 49.1
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 4.7e-15 85.9 112 61.6
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 6.1e-15 85.5 108 49.1
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 6.1e-15 85.5 112 48.2
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 7.9e-15 85.1 104 62.5
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 7.9e-15 85.1 104 66.3
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.0e-14 84.7 110 49.1
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.0e-14 84.7 95 63.2
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.4e-14 84.3 108 49.1
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 2.3e-14 83.6 111 63.1
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 2.3e-14 83.6 114 64.0
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 2.3e-14 83.6 108 49.1
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 2.3e-14 83.6 108 63.9
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 3.0e-14 83.2 115 47.8
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 3.0e-14 83.2 105 46.7
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 3.9e-14 82.8 111 52.3
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 3.9e-14 82.8 105 60.0
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 5.1e-14 82.4 111 64.0
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 5.1e-14 82.4 109 66.1
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 6.7e-14 82.0 100 67.0
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 6.7e-14 82.0 101 68.3
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.1e-13 81.3 110 46.4
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 1.1e-13 81.3 110 59.1
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 1.5e-13 80.9 108 62.0
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.5e-13 80.9 113 57.5
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 2.0e-13 80.5 110 66.4
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 2.0e-13 80.5 113 67.3
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 3.3e-13 79.7 102 45.1
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 3.3e-13 79.7 109 48.6
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 5.7e-13 79.0 105 59.0
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 7.4e-13 78.6 109 62.4
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 7.4e-13 78.6 98 69.4
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 7.4e-13 78.6 101 62.4
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 1.3e-12 77.8 77 55.8
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 1.3e-12 77.8 77 58.4
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.7e-12 77.4 103 46.6
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 1.7e-12 77.4 108 57.4
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.7e-12 77.4 113 48.7
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.7e-12 77.4 116 62.9
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 1.7e-12 77.4 113 60.2
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.2e-12 77.0 108 56.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 2.8e-12 76.6 98 69.4
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 3.7e-12 76.3 113 58.4
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 4.8e-12 75.9 79 57.0
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 4.8e-12 75.9 104 62.5
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 6.3e-12 75.5 84 56.0
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 6.3e-12 75.5 108 56.5
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 8.2e-12 75.1 114 43.9
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 1.4e-11 74.3 109 61.5
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 1.8e-11 73.9 104 61.5
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.8e-11 73.9 134 38.8
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 1.8e-11 73.9 116 57.8
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 2.4e-11 73.6 75 58.7
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 3.1e-11 73.2 68 61.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 4.1e-11 72.8 111 56.8
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 4.1e-11 72.8 98 63.3
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 5.3e-11 72.4 100 64.0
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 9.1e-11 71.6 109 55.0
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 1.2e-10 71.2 111 62.2
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 2.0e-10 70.5 100 62.0
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 3.4e-10 69.7 114 42.1
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.5e-10 69.3 98 45.9
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 5.9e-10 68.9 98 62.2
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 7.7e-10 68.6 101 64.4
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.3e-09 67.8 100 44.0
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 1.3e-09 67.8 100 44.0
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.7e-09 67.4 104 52.9
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 1.7e-09 67.4 107 51.4
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.9e-09 66.6 69 56.5
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.9e-09 66.6 100 43.0
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 5.0e-09 65.9 69 56.5
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.5e-09 65.1 69 56.5
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.5e-09 65.1 69 56.5
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 1.4e-08 64.3 98 41.8
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 2.5e-08 63.5 67 49.3
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 1.2e-07 61.2 107 41.1
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.6e-07 60.8 114 57.0
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 1.6e-07 60.8 107 39.3
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.6e-07 60.8 56 55.4
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 2.1e-07 60.5 109 56.9
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 3.9e-06 56.2 108 35.2
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 3.9e-06 56.2 66 50.0


User provided reference genes

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