Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 7.5e-129 463.8 219 100.0
FAN23G2199 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.7e-104 382.9 214 86.9
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.3e-61 240.4 115 96.5
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.3e-61 240.4 115 96.5
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.3e-61 239.6 110 100.0
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.1e-60 237.3 115 95.7
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.5e-60 236.1 110 99.1
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 9.6e-60 234.2 115 94.8
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 8.2e-59 231.1 105 100.0
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 6.9e-58 228.0 115 91.3
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 1.6e-46 190.3 115 77.4
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 1.0e-45 187.6 115 78.3
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 1.2e-38 164.1 116 68.1
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 3.6e-38 162.5 116 68.1
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 3.6e-38 162.5 116 71.6
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 3.0e-37 159.5 115 64.3
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 3.3e-36 156.0 116 69.0
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 4.4e-36 155.6 116 68.1
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 4.4e-36 155.6 119 68.1
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 5.7e-36 155.2 116 65.5
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 5.7e-36 155.2 133 60.2
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 9.7e-36 154.5 121 65.3
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 1.7e-35 153.7 116 65.5
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 3.7e-35 152.5 117 67.5
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 1.1e-34 151.0 116 67.2
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 1.1e-34 151.0 116 66.4
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 2.4e-34 149.8 116 62.9
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 9.1e-34 147.9 116 66.4
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 1.2e-33 147.5 116 66.4
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 2.6e-33 146.4 116 64.7
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 4.5e-33 145.6 116 60.3
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 4.5e-33 145.6 115 60.9
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 7.7e-33 144.8 116 62.1
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 1.0e-32 144.4 116 64.7
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 1.3e-32 144.1 107 62.6
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 1.3e-32 144.1 107 63.6
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 2.9e-32 142.9 122 56.6
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 2.9e-32 142.9 122 56.6
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 3.8e-32 142.5 117 59.0
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 3.8e-32 142.5 103 68.9
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 6.5e-32 141.7 117 63.2
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 1.1e-31 141.0 94 70.2
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 1.9e-31 140.2 117 59.0
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 4.2e-31 139.0 117 59.0
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 7.2e-31 138.3 115 60.9
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 1.2e-30 137.5 116 61.2
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 1.2e-30 137.5 116 60.3
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 1.6e-30 137.1 103 63.1
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 1.6e-30 137.1 116 60.3
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 2.1e-30 136.7 116 58.6
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 2.7e-30 136.3 121 58.7
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 4.7e-30 135.6 116 62.1
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 6.1e-30 135.2 115 56.5
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 8.0e-30 134.8 118 56.8
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 8.0e-30 134.8 116 59.5
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 1.4e-29 134.0 116 56.9
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 3.0e-29 132.9 115 58.3
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 4.0e-29 132.5 106 60.4
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 5.2e-29 132.1 118 54.2
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 6.7e-29 131.7 115 53.9
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 1.5e-28 130.6 115 59.1
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 1.5e-28 130.6 116 57.8
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.6e-28 129.8 115 57.4
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 4.4e-28 129.0 116 55.2
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 5.7e-28 128.6 115 56.5
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 9.7e-28 127.9 116 56.0
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 9.7e-28 127.9 115 53.9
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.2e-27 126.7 115 56.5
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 2.8e-27 126.3 118 53.4
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 8.2e-27 124.8 106 57.5
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 1.4e-26 124.0 116 55.2
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 3.1e-26 122.9 115 51.3
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 5.3e-26 122.1 106 49.1
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 3.5e-25 119.4 122 52.5
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 5.9e-25 118.6 109 55.0
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 5.0e-24 115.5 122 51.6
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 8.5e-24 114.8 100 53.0
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 1.1e-23 114.4 105 52.4
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 1.1e-23 114.4 96 53.1
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 1.1e-23 114.4 116 51.7
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 1.9e-23 113.6 100 54.0
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 5.5e-23 112.1 100 53.0
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 5.5e-23 112.1 117 50.4
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 9.4e-23 111.3 105 48.6
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 1.2e-22 110.9 101 52.5
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 1.6e-22 110.5 100 55.0
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 2.1e-22 110.2 116 44.0
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 3.6e-22 109.4 100 54.0
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 3.6e-22 109.4 100 54.0
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 3.6e-22 109.4 100 54.0
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 3.6e-22 109.4 100 54.0
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 3.6e-22 109.4 119 47.1
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 4.7e-22 109.0 93 53.8
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 8.0e-22 108.2 100 53.0
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 1.2e-20 104.4 101 50.5
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 2.0e-20 103.6 117 52.1
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 4.8e-19 99.0 118 44.1
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 1.4e-18 97.4 145 40.7
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 4.5e-17 92.4 107 43.0
SMO203G0085 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 2.8e-14 83.2 98 41.8
FvH4_4g25240 Fragaria vesca HOM05D006855 ORTHO05D008695 3.6e-14 82.8 37 89.2
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 4.4e-12 75.9 80 53.8
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 6.3e-11 72.0 59 61.0
Nitab4.5_0000718g0180 Nicotiana tabacum HOM05D006855 ORTHO05D008695 5.4e-10 68.9 57 59.6
SMO327G0033 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 5.4e-10 68.9 84 40.5
SMO203G0059 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.2e-09 67.8 86 41.9
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 2.7e-09 66.6 59 59.3
FAN08G1400 Fragaria x ananassa HOM05D006855 ORTHO05D199622 5.9e-09 65.5 33 78.8
Cre01.g031850 Chlamydomonas reinhardtii HOM05D006855 ORTHO05D008695 3.8e-08 62.8 132 28.0
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 4.7e-06 55.8 59 47.5
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 8.0e-06 55.1 59 42.4


User provided reference genes

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