Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.2e-70 269.6 131 100.0
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 4.7e-70 267.7 131 99.2
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 3.1e-69 265.0 131 98.5
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 5.8e-68 260.8 131 95.4
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 7.5e-68 260.4 131 96.2
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 2.4e-66 255.4 131 93.1
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 4.3e-63 244.6 131 87.8
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 1.2e-62 243.0 131 88.5
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 2.8e-62 241.9 131 87.8
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 6.8e-61 237.3 126 89.7
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 1.5e-60 236.1 122 91.0
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 1.5e-60 236.1 131 83.2
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 2.0e-60 235.7 129 86.8
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 2.6e-60 235.3 131 85.5
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 2.6e-60 235.3 123 89.4
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 4.4e-60 234.6 129 86.8
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.3e-59 233.0 131 84.0
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 1.3e-59 233.0 123 87.8
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 1.3e-59 233.0 129 85.3
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 1.7e-59 232.6 123 89.4
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 1.7e-59 232.6 122 90.2
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 2.2e-59 232.3 123 87.0
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 2.9e-59 231.9 123 88.6
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 2.9e-59 231.9 131 82.4
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 3.7e-59 231.5 123 87.0
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 4.9e-59 231.1 129 83.7
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 6.4e-59 230.7 129 82.2
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 8.3e-59 230.3 126 84.9
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 8.3e-59 230.3 122 89.3
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 8.3e-59 230.3 131 81.7
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 1.1e-58 229.9 129 82.9
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 1.1e-58 229.9 129 83.7
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 1.1e-58 229.9 129 83.7
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 1.1e-58 229.9 122 87.7
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 1.1e-58 229.9 121 87.6
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.4e-58 229.6 131 81.7
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 1.4e-58 229.6 121 87.6
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 3.2e-58 228.4 124 84.7
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 4.1e-58 228.0 119 89.9
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 5.4e-58 227.6 122 87.7
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 7.1e-58 227.3 133 82.7
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 7.1e-58 227.3 123 87.8
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 7.1e-58 227.3 122 87.7
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 1.2e-57 226.5 122 87.7
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 1.2e-57 226.5 131 81.7
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 1.6e-57 226.1 122 86.1
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.6e-57 226.1 131 80.9
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.1e-57 225.7 126 84.1
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 2.7e-57 225.3 121 86.8
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 2.7e-57 225.3 121 86.8
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 2.7e-57 225.3 119 88.2
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 3.5e-57 224.9 122 86.9
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 4.6e-57 224.6 122 85.2
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 6.0e-57 224.2 121 84.3
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 1.0e-56 223.4 122 86.1
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.0e-56 223.4 118 93.2
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 1.0e-56 223.4 121 85.1
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 1.3e-56 223.0 126 84.9
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 1.7e-56 222.6 128 83.6
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 1.7e-56 222.6 122 84.4
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 2.3e-56 222.2 122 83.6
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 3.0e-56 221.9 121 84.3
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 3.9e-56 221.5 108 99.1
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 3.9e-56 221.5 122 84.4
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 5.1e-56 221.1 122 84.4
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 6.6e-56 220.7 122 83.6
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 1.9e-55 219.2 128 81.2
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 1.9e-55 219.2 121 82.6
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 3.3e-55 218.4 128 82.0
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 4.3e-55 218.0 128 81.2
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 4.3e-55 218.0 128 81.2
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 4.3e-55 218.0 121 81.8
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 5.6e-55 217.6 128 82.0
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.2e-54 216.5 121 82.6
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 1.6e-54 216.1 128 80.5
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 1.6e-54 216.1 128 80.5
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 2.1e-54 215.7 128 81.2
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 2.1e-54 215.7 132 79.5
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 3.6e-54 214.9 122 82.0
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 3.6e-54 214.9 122 82.0
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 4.7e-54 214.5 122 82.8
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 4.7e-54 214.5 122 82.0
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 6.2e-54 214.2 122 82.0
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 6.2e-54 214.2 122 82.0
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 1.8e-53 212.6 120 83.3
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 1.8e-53 212.6 120 83.3
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 1.8e-53 212.6 118 84.7
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 2.3e-53 212.2 128 79.7
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 6.8e-53 210.7 131 78.6
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 2.0e-52 209.1 130 80.0
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 1.3e-51 206.5 158 67.1
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 6.4e-51 204.1 111 87.4
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 4.1e-50 201.4 108 88.9
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 4.1e-50 201.4 109 90.8
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 4.1e-50 201.4 111 86.5
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 5.4e-50 201.1 108 88.9
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 9.2e-50 200.3 129 77.5
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 9.2e-50 200.3 112 85.7
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 2.1e-49 199.1 163 64.4
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 2.1e-49 199.1 116 82.8
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 7.8e-49 197.2 107 87.9
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.0e-48 196.8 107 86.0
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 5.1e-48 194.5 108 86.1
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.5e-47 193.0 126 73.0
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 2.5e-47 192.2 107 85.0
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 3.6e-46 188.3 107 85.0
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 2.4e-45 185.7 121 74.4
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 2.6e-44 182.2 99 88.9
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 6.4e-43 177.6 118 68.6
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 1.1e-42 176.8 112 75.0
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 1.6e-38 162.9 92 83.7
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 9.0e-37 157.1 82 86.6
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 5.8e-36 154.5 116 62.9
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 4.6e-33 144.8 126 55.6
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 6.6e-32 141.0 126 55.6
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 1.1e-31 140.2 126 55.6
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 1.1e-31 140.2 126 55.6
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 6.2e-30 134.4 119 53.8
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 1.1e-26 123.6 108 55.6
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 1.4e-26 123.2 87 64.4
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 1.3e-24 116.7 75 72.0
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 6.7e-24 114.4 130 39.2
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 2.5e-23 112.5 126 41.3


User provided reference genes

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