Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 8.7e-125 450.3 223 100.0
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 9.6e-124 446.8 223 98.7
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 3.8e-120 434.9 223 96.4
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 3.5e-118 428.3 223 95.5
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.8e-117 426.0 223 95.1
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 5.1e-117 424.5 223 94.6
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 1.9e-103 379.4 223 87.0
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.2e-80 302.8 163 93.3
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 3.7e-59 232.3 230 59.1
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 4.7e-54 215.3 215 58.6
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 2.2e-43 179.9 217 47.0
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 1.2e-38 164.1 223 46.6
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 6.2e-38 161.8 217 43.3
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 1.7e-35 153.7 226 42.0
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 1.7e-35 153.7 226 42.0
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 3.8e-35 152.5 226 41.6
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 9.3e-34 147.9 227 42.7
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 2.1e-30 136.7 222 41.0
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 5.3e-29 132.1 221 38.9
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 9.0e-29 131.3 213 39.4
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 4.5e-28 129.0 217 41.0
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 5.8e-28 128.6 227 38.8
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 7.9e-25 118.2 110 63.6
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 6.7e-24 115.2 222 36.5
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 7.4e-23 111.7 216 35.6
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 8.1e-22 108.2 227 35.7
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 2.4e-21 106.7 221 36.2
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 7.6e-20 101.7 226 32.3
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 3.2e-18 96.3 196 34.7
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 1.2e-17 94.4 121 44.6
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 2.1e-14 83.6 224 33.5
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 1.1e-13 81.3 91 48.4
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 1.1e-13 81.3 175 34.3
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 5.3e-13 79.0 149 35.6
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 6.9e-13 78.6 159 37.1
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 7.6e-12 75.1 209 31.6
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 6.5e-11 72.0 167 31.7
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 1.2e-09 67.8 172 29.1
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 1.2e-09 67.8 167 30.5
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 2.1e-09 67.0 161 31.7
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 3.0e-08 63.2 92 40.2
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 4.3e-07 59.3 94 39.4
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 5.7e-07 58.9 52 51.9
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 1.3e-06 57.8 107 36.4


User provided reference genes

Program Settings