Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4890 Fragaria x ananassa HOM05D000274 ORTHO05D005803 3.0e-57 224.9 113 100.0
FAN14G5200 Fragaria x ananassa HOM05D000564 ORTHO05D001690 3.8e-52 208.0 110 96.4
FAN17G2737 Fragaria x ananassa HOM05D000274 ORTHO05D005803 1.0e-33 146.7 220 45.0
FAN12G2669 Fragaria x ananassa HOM05D000274 ORTHO05D005803 4.0e-33 144.8 220 44.1
RcHm_v2.0_Chr4g0446681 Rosa chinensis HOM05D000274 ORTHO05D005803 5.2e-33 144.4 220 44.1
FAN07G1231 Fragaria x ananassa HOM05D000274 ORTHO05D005803 8.8e-33 143.7 223 44.8
FvH4_4g36920 Fragaria vesca HOM05D000274 ORTHO05D005803 4.4e-32 141.4 223 43.5
Prupe.1G347500 Prunus persica HOM05D000274 ORTHO05D005803 1.4e-30 136.3 220 42.7
Ah.01g001510 Amaranthus hybridus HOM05D000274 ORTHO05D005803 3.1e-30 135.2 159 50.3
CAN.G157.30 Capsicum annuum HOM05D000274 ORTHO05D005803 5.0e-28 127.9 214 40.2
Dinv17614 Davidia involucrata HOM05D000274 ORTHO05D005803 1.5e-27 126.3 219 41.6
Sc17g0004130 Simmondsia chinensis HOM05D000274 ORTHO05D005803 1.9e-27 125.9 213 40.4
TWI74G0936 Tripterygium wilfordii HOM05D000274 ORTHO05D005803 1.9e-27 125.9 211 41.2
Lj3g0026157 Lotus japonicus HOM05D000274 ORTHO05D005803 2.5e-27 125.6 214 38.8
Nitab4.5_0000405g0090 Nicotiana tabacum HOM05D000274 ORTHO05D005803 2.5e-27 125.6 213 39.9
Manes.04G061400 Manihot esculenta HOM05D000274 ORTHO05D005803 3.3e-27 125.2 215 39.1
Actinidia13712 Actinidia chinensis HOM05D000274 ORTHO05D005803 4.3e-27 124.8 211 40.3
Actinidia38414 Actinidia chinensis HOM05D000274 ORTHO05D005803 4.3e-27 124.8 211 40.3
Atru.chr11.1122 Acer truncatum HOM05D000274 ORTHO05D005803 5.6e-27 124.4 208 40.9
MSTRG.2061 Avicennia marina HOM05D000274 ORTHO05D005803 5.6e-27 124.4 211 39.3
Eucgr.G02574 Eucalyptus grandis HOM05D000274 ORTHO05D005803 5.6e-27 124.4 217 39.6
SalBow3G1982 Salvia bowleyana HOM05D000274 ORTHO05D005803 7.3e-27 124.0 211 38.9
Lj3A849T47 Lonicera japonica HOM05D000274 ORTHO05D005803 9.5e-27 123.6 215 39.1
DCAR_023458 Daucus carota HOM05D000274 ORTHO05D005803 1.2e-26 123.2 214 39.7
Gohir.A12G133700 Gossypium hirsutum HOM05D000274 ORTHO05D005803 1.2e-26 123.2 224 39.7
Sabra07G0060400 Salix brachista HOM05D000274 ORTHO05D005803 1.2e-26 123.2 216 38.0
PGSC0003DMG400032562 Solanum tuberosum HOM05D000274 ORTHO05D005803 1.2e-26 123.2 215 39.5
DCAR_026898 Daucus carota HOM05D000274 ORTHO05D005803 1.6e-26 122.9 212 39.2
MD16G1002600 Malus domestica HOM05D000274 ORTHO05D005803 1.6e-26 122.9 219 39.3
Dinv11722 Davidia involucrata HOM05D000274 ORTHO05D005803 2.1e-26 122.5 220 40.5
ClCG10G011980 Citrullus lanatus HOM05D000274 ORTHO05D005803 2.8e-26 122.1 211 39.3
Nitab4.5_0000771g0060 Nicotiana tabacum HOM05D000274 ORTHO05D005803 2.8e-26 122.1 214 39.3
Nitab4.5_0002132g0030 Nicotiana tabacum HOM05D000274 ORTHO05D005803 2.8e-26 122.1 213 39.4
Cfa008742 Carpinus fangiana HOM05D000274 ORTHO05D005803 3.6e-26 121.7 211 39.3
Haze_11758 Corylus avellana HOM05D000274 ORTHO05D005803 3.6e-26 121.7 211 39.3
Gohir.D12G137200 Gossypium hirsutum HOM05D000274 ORTHO05D005803 3.6e-26 121.7 224 38.8
Gorai.008G148500 Gossypium raimondii HOM05D000274 ORTHO05D005803 3.6e-26 121.7 224 38.8
Ciclev10032560m.g Citrus clementina HOM05D000274 ORTHO05D005803 4.7e-26 121.3 209 39.2
Migut.E00598 Erythranthe guttata HOM05D000274 ORTHO05D005803 4.7e-26 121.3 214 38.3
Potri.007G071700 Populus trichocarpa HOM05D000274 ORTHO05D005803 4.7e-26 121.3 216 37.5
TWI77G0920 Tripterygium wilfordii HOM05D000274 ORTHO05D005803 4.7e-26 121.3 211 40.3
Cpa.g.sc0.141 Carica papaya HOM05D000274 ORTHO05D005803 6.1e-26 120.9 211 39.8
MELO3C024021.2 Cucumis melo HOM05D000274 ORTHO05D005803 6.1e-26 120.9 211 38.9
CsaV3_3G031380 Cucumis sativus L. HOM05D000274 ORTHO05D005803 6.1e-26 120.9 211 39.3
CSS0032191 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D005803 8.0e-26 120.6 219 40.2
Nitab4.5_0005356g0030 Nicotiana tabacum HOM05D000274 ORTHO05D005803 8.0e-26 120.6 214 39.3
PGSC0003DMG402010580 Solanum tuberosum HOM05D000274 ORTHO05D005803 8.0e-26 120.6 213 38.0
Peaxi162Scf00079g01814 Petunia axillaris HOM05D000274 ORTHO05D005803 1.4e-25 119.8 211 39.8
Potri.005G092600 Populus trichocarpa HOM05D000274 ORTHO05D005803 1.8e-25 119.4 214 37.9
Sabra05G0076700 Salix brachista HOM05D000274 ORTHO05D005803 1.8e-25 119.4 214 37.9
AUR62017699 Chenopodium quinoa HOM05D000274 ORTHO05D005803 2.3e-25 119.0 213 39.0
Duzib052G0407 Durio zibethinus HOM05D000274 ORTHO05D005803 2.3e-25 119.0 219 37.9
Duzib132G0023 Durio zibethinus HOM05D000274 ORTHO05D005803 2.3e-25 119.0 217 39.2
SGA_v2.0_scaffold65G22158 Striga asiatica HOM05D000274 ORTHO05D005803 2.3e-25 119.0 211 38.4
Lsat_1_v5_gn_3_35380 Lactuca sativa HOM05D000274 ORTHO05D005803 3.0e-25 118.6 211 39.3
Lalb_Chr01g0001421 Lupinus albus HOM05D000274 ORTHO05D005803 4.0e-25 118.2 213 38.0
Thecc.02G160000 Theobroma cacao HOM05D000274 ORTHO05D005803 4.0e-25 118.2 227 38.8
THA.LOC104800888 Tarenaya hassleriana HOM05D000274 ORTHO05D005803 5.2e-25 117.9 214 37.9
THA.LOC104818372 Tarenaya hassleriana HOM05D000274 ORTHO05D005803 5.2e-25 117.9 214 37.4
Aa31LG11G2630 Aethionema arabicum HOM05D000274 ORTHO05D005803 6.8e-25 117.5 214 38.8
HanXRQChr06g0171541 Helianthus annuus HOM05D000274 ORTHO05D005803 6.8e-25 117.5 217 38.2
Oeu027917.1 Olea europaea HOM05D000274 ORTHO05D005803 6.8e-25 117.5 213 37.6
Glyma.12G026400 Glycine max HOM05D000274 ORTHO05D005803 8.9e-25 117.1 212 37.7
Hma1.2p1_0044F.1_g026140 Hydrangea macrophylla HOM05D000274 ORTHO05D005803 8.9e-25 117.1 221 38.0
Solyc04g009310.4 Solanum lycopersicum HOM05D000274 ORTHO05D005803 8.9e-25 117.1 215 38.1
Sopen04g004430 Solanum pennellii HOM05D000274 ORTHO05D005803 8.9e-25 117.1 215 38.1
PGR142G1944 Punica granatum HOM05D000274 ORTHO05D005803 1.2e-24 116.7 217 38.2
Lj6C718G2 Lonicera japonica HOM05D000274 ORTHO05D005803 1.5e-24 116.3 225 36.4
QL03p046459 Quercus lobata HOM05D000274 ORTHO05D005803 1.5e-24 116.3 212 39.2
CiPaw.05G169200 Carya illinoinensis HOM05D000274 ORTHO05D005803 2.0e-24 115.9 204 39.7
Medtr4g075100 Medicago truncatula HOM05D000274 ORTHO05D005803 2.0e-24 115.9 212 37.7
GSVIVG01012051001 Vitis vinifera HOM05D000274 ORTHO05D005803 2.0e-24 115.9 210 39.0
arahy.Tifrunner.gnm1.ann1.I14ERJ Arachis hypogaea HOM05D000274 ORTHO05D005803 2.6e-24 115.5 212 38.7
arahy.Tifrunner.gnm1.ann1.JE56K8 Arachis hypogaea HOM05D000274 ORTHO05D005803 2.6e-24 115.5 212 38.7
Glyma.11G100300 Glycine max HOM05D000274 ORTHO05D005803 2.6e-24 115.5 211 37.4
Gohir.A13G060200 Gossypium hirsutum HOM05D000274 ORTHO05D005803 2.6e-24 115.5 224 38.4
Gohir.D13G061700 Gossypium hirsutum HOM05D000274 ORTHO05D005803 2.6e-24 115.5 224 38.4
Gorai.013G070200 Gossypium raimondii HOM05D000274 ORTHO05D005803 2.6e-24 115.5 224 38.4
HanXRQChr13g0387761 Helianthus annuus HOM05D000274 ORTHO05D005803 2.6e-24 115.5 206 38.8
VMungo1127G1635 Vigna mungo HOM05D000274 ORTHO05D005803 2.6e-24 115.5 213 37.6
Sed0015389 Sechium edule HOM05D000274 ORTHO05D005803 3.4e-24 115.2 211 37.0
CARHR190390 Cardamine hirsuta HOM05D000274 ORTHO05D005803 4.4e-24 114.8 215 37.7
Thhalv10004843m.g Eutrema salsugineum HOM05D000274 ORTHO05D005803 4.4e-24 114.8 214 37.4
Sp2g23980 Schrenkiella parvula HOM05D000274 ORTHO05D005803 4.4e-24 114.8 214 37.4
Sp6g34720 Schrenkiella parvula HOM05D000274 ORTHO05D005803 4.4e-24 114.8 211 37.0
CANSAT56G2159 Cannabis sativa HOM05D000274 ORTHO05D005803 7.5e-24 114.0 223 36.8
AUR62015237 Chenopodium quinoa HOM05D000274 ORTHO05D005803 7.5e-24 114.0 216 37.0
Peaxi162Scf00363g00027 Petunia axillaris HOM05D000474 ORTHO05D009665 7.5e-24 114.0 198 39.4
AL6G34330 Arabidopsis lyrata HOM05D000274 ORTHO05D005803 1.7e-23 112.8 214 36.4
MSTRG.13685 Avicennia marina HOM05D000274 ORTHO05D005803 1.7e-23 112.8 211 37.4
Carub.0006s2093 Capsella rubella HOM05D000274 ORTHO05D005803 1.7e-23 112.8 214 36.4
QL03p035868 Quercus lobata HOM05D000274 ORTHO05D005803 1.7e-23 112.8 212 38.2
AT5G23140 Arabidopsis thaliana HOM05D000274 ORTHO05D005803 2.2e-23 112.5 214 36.4
COL.COLO4_19600 Corchorus olitorius HOM05D000274 ORTHO05D005803 2.9e-23 112.1 223 38.6
Rhsim04G0167200 Rhododendron simsii HOM05D000274 ORTHO05D005803 2.9e-23 112.1 215 35.8
EL10Ac9g22951 Beta vulgaris HOM05D000274 ORTHO05D005803 3.7e-23 111.7 219 37.9
Lsat_1_v5_gn_8_33520 Lactuca sativa HOM05D000274 ORTHO05D005803 3.7e-23 111.7 207 37.2
TPR.G32332 Trifolium pratense HOM05D000274 ORTHO05D005803 3.7e-23 111.7 211 37.0
Psat7g138120 Pisum sativum HOM05D000274 ORTHO05D005803 4.9e-23 111.3 213 37.6
C07p44390 Brassica napus HOM05D000274 ORTHO05D005803 6.4e-23 110.9 214 36.9
BolC7t44961H Brassica oleracea HOM05D000274 ORTHO05D005803 6.4e-23 110.9 214 36.9
Thhalv10014542m.g Eutrema salsugineum HOM05D000274 ORTHO05D005803 6.4e-23 110.9 211 36.0
Phvul.011G029300 Phaseolus vulgaris HOM05D000274 ORTHO05D005803 6.4e-23 110.9 216 35.6
A10p28450 Brassica napus HOM05D000274 ORTHO05D005803 1.1e-22 110.2 211 37.0
BraA10t44893Z Brassica rapa HOM05D000274 ORTHO05D005803 1.1e-22 110.2 211 37.0
C09p68720 Brassica napus HOM05D000274 ORTHO05D005803 3.2e-22 108.6 211 36.5
Ca_19018_v3 Cicer arietinum L. HOM05D000274 ORTHO05D005803 3.2e-22 108.6 220 35.9
BolC9t59619H Brassica oleracea HOM05D000274 ORTHO05D005803 5.4e-22 107.8 217 35.9
ECA233G2349 Erigeron canadensis HOM05D000274 ORTHO05D005803 9.2e-22 107.1 204 36.8
A03p46370 Brassica napus HOM05D000274 ORTHO05D005803 1.6e-21 106.3 212 36.8
BraA03t13763Z Brassica rapa HOM05D000274 ORTHO05D005803 1.6e-21 106.3 212 36.8
ECA246G4736 Erigeron canadensis HOM05D000274 ORTHO05D005803 1.6e-21 106.3 211 35.1
vmacro08598 Vaccinium macrocarpon HOM05D000274 ORTHO05D005803 2.7e-21 105.5 260 31.9
Migut.E00573 Erythranthe guttata HOM05D000274 ORTHO05D005803 4.6e-21 104.8 211 35.1
Aqoxy3G04254 Aquilegia oxysepala HOM05D000274 ORTHO05D005803 1.3e-20 103.2 216 35.2
BcaB08g37274 Brassica carinata HOM05D001820 ORTHO05D005803 1.3e-20 103.2 214 35.0
TAR371G1024 Trochodendron aralioides HOM05D000274 ORTHO05D005803 3.0e-20 102.1 216 34.7
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 3.9e-20 101.7 203 36.5
Cc11_g02360 Coffea canephora HOM05D000274 ORTHO05D005803 8.6e-20 100.5 200 37.5
Nn4g24955 Nelumbo nucifera HOM05D000274 ORTHO05D005803 8.6e-20 100.5 215 34.9
HPP92_008571 Vanilla planifolia HOM05D000274 ORTHO05D005803 4.3e-19 98.2 209 35.4
MBI03_g09363_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D005803 7.3e-19 97.4 205 36.1
CARHR204940 Cardamine hirsuta HOM05D000274 ORTHO05D005803 9.5e-19 97.1 60 76.7
MD13G1005300 Malus domestica HOM05D000274 ORTHO05D005803 1.2e-18 96.7 58 81.0
TAR629G2724 Trochodendron aralioides HOM05D000274 ORTHO05D005803 1.6e-18 96.3 215 35.3
SEGI_24498 Sequoiadendron giganteum HOM05D000274 ORTHO05D005803 2.1e-18 95.9 215 35.3
Mapoly0010s0007 Marchantia polymorpha HOM05D000274 ORTHO05D005803 3.6e-18 95.1 206 33.5
CDE10G0099 Ceratophyllum demersum HOM05D000274 ORTHO05D005803 8.0e-18 94.0 212 33.5
Os04g0525600 Oryza sativa ssp. japonica HOM05D000274 ORTHO05D005803 1.1e-17 93.6 59 79.7
Pp3c4_31230 Physcomitrium patens HOM05D000274 ORTHO05D005803 1.4e-17 93.2 57 80.7
Zm00001eb076840 Zea mays HOM05D000274 ORTHO05D005803 1.4e-17 93.2 59 79.7
Manes.11G107700 Manihot esculenta HOM05D000274 ORTHO05D005803 3.1e-17 92.0 193 35.2
Zm00001eb426970 Zea mays HOM05D000274 ORTHO05D005803 3.1e-17 92.0 56 82.1
AagrBONN_evm.TU.Sc2ySwM_344.1079 Anthoceros agrestis HOM05D000274 ORTHO05D005803 5.2e-17 91.3 59 76.3
SMO228G0066 Selaginella moellendorffii HOM05D000274 ORTHO05D005803 1.5e-16 89.7 56 78.6
Zm00001eb185450 Zea mays HOM05D000274 ORTHO05D005803 2.0e-16 89.4 56 82.1
Rhsim04G0166800 Rhododendron simsii HOM05D000274 ORTHO05D005803 2.6e-16 89.0 56 80.4
ATR0618G285 Amborella trichopoda HOM05D000274 ORTHO05D005803 5.8e-16 87.8 59 74.6
Zm00001eb248150 Zea mays HOM05D000274 ORTHO05D005803 7.5e-16 87.4 56 80.4
CAN.G619.42 Capsicum annuum HOM05D000274 ORTHO05D005803 1.7e-15 86.3 49 85.7
Os02g0634500 Oryza sativa ssp. japonica HOM05D000274 ORTHO05D005803 1.7e-15 86.3 59 72.9
Rhsim04G0167000 Rhododendron simsii HOM05D000274 ORTHO05D005803 2.2e-15 85.9 56 76.8
CBR_g24278 Chara braunii HOM05D000274 ORTHO05D005803 1.9e-14 82.8 58 67.2
CDE02G2514 Ceratophyllum demersum HOM05D000274 ORTHO05D005803 7.0e-14 80.9 179 34.6
MD13G1005500 Malus domestica HOM05D000274 ORTHO05D005803 6.0e-13 77.8 53 73.6
Rhsim04G0166700 Rhododendron simsii HOM05D000274 ORTHO05D005803 3.9e-12 75.1 50 70.0
CAN.G942.1 Capsicum annuum HOM05D000274 ORTHO05D005803 8.6e-12 73.9 47 76.6
Haze_26735 Corylus avellana HOM05D000274 ORTHO05D005803 2.5e-11 72.4 58 58.6
Rhsim04G0166900 Rhododendron simsii HOM05D000274 ORTHO05D005803 1.2e-10 70.1 47 70.2
Rhsim04G0167100 Rhododendron simsii HOM05D000274 ORTHO05D005803 2.8e-10 68.9 46 71.7
PRCOL_00000660 Prasinoderma coloniale HOM05D002634 ORTHO05D003100 1.9e-06 56.2 52 51.9
Lsat_1_v5_gn_4_76520 Lactuca sativa HOM05D000274 ORTHO05D230922 2.4e-06 55.8 46 60.9


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