Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 2.7e-283 978.0 493 100.0
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 9.8e-262 906.4 493 93.7
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 1.1e-239 833.2 498 86.9
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 8.4e-229 797.0 400 99.8
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.3e-216 756.5 453 86.1
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 3.2e-212 741.9 475 80.0
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 4.6e-203 711.4 475 75.6
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 1.8e-202 709.5 504 73.0
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.1e-199 700.3 479 77.5
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 1.4e-188 663.3 409 85.1
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 2.7e-187 659.1 508 67.9
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 1.3e-181 640.2 504 65.7
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 2.5e-180 636.0 524 64.7
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 3.6e-179 632.1 486 65.4
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 6.1e-179 631.3 495 65.3
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 2.6e-177 625.9 474 66.2
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 7.5e-177 624.4 498 70.1
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 7.5e-177 624.4 486 65.0
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 3.1e-175 619.0 486 65.4
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 1.6e-174 616.7 516 62.6
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 7.7e-174 614.4 498 63.3
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 5.0e-173 611.7 492 64.4
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 6.5e-173 611.3 488 64.3
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 4.2e-172 608.6 468 66.7
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 4.2e-172 608.6 526 60.8
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 5.5e-172 608.2 469 66.3
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 1.2e-171 607.1 529 60.5
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 2.1e-171 606.3 497 64.2
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 3.6e-171 605.5 522 59.8
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 3.6e-171 605.5 526 60.3
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 4.7e-171 605.1 550 58.0
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 2.3e-170 602.8 466 64.8
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 8.8e-170 600.9 506 62.3
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 4.4e-169 598.6 506 61.3
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 1.4e-167 593.6 532 58.8
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 1.8e-167 593.2 480 63.1
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 1.8e-167 593.2 492 61.8
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 3.1e-167 592.4 455 65.9
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 1.6e-166 590.1 490 61.8
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 4.5e-166 588.6 489 60.9
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 7.7e-166 587.8 579 54.6
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 2.3e-165 586.3 482 61.4
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 3.8e-165 585.5 494 59.3
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 5.0e-165 585.1 526 58.7
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 5.5e-164 581.6 545 57.4
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 1.6e-163 580.1 497 59.0
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 2.1e-163 579.7 477 61.6
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 4.7e-163 578.6 464 64.7
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 6.1e-163 578.2 469 60.8
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 1.0e-162 577.4 496 59.3
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 6.8e-162 574.7 527 58.1
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 1.2e-161 573.9 510 58.0
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 2.0e-161 573.2 495 58.8
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 9.8e-161 570.9 477 62.9
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 9.8e-161 570.9 460 63.5
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 1.7e-160 570.1 543 56.9
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 4.9e-160 568.5 502 57.8
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 8.3e-160 567.8 495 60.4
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 2.4e-159 566.2 491 60.9
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 4.1e-159 565.5 511 58.1
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 7.0e-159 564.7 504 58.5
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 7.0e-159 564.7 488 60.5
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 1.2e-158 563.9 504 58.5
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 1.2e-158 563.9 490 59.0
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 1.2e-158 563.9 477 60.0
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 4.5e-158 562.0 504 57.9
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 5.9e-158 561.6 519 56.1
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 2.3e-157 559.7 494 58.5
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 3.8e-157 558.9 471 59.4
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 6.6e-157 558.1 471 60.1
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 7.3e-156 554.7 501 56.5
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 1.6e-155 553.5 501 56.5
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 6.1e-155 551.6 502 56.8
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 6.1e-155 551.6 477 61.6
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 6.1e-155 551.6 609 50.6
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.5e-153 547.0 543 55.2
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 4.6e-150 535.4 466 61.4
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.0e-149 534.3 460 57.8
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 3.9e-149 532.3 564 54.3
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 1.1e-148 530.8 434 64.1
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 5.8e-145 518.5 493 56.0
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 2.7e-142 509.6 467 57.0
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 8.6e-141 504.6 471 56.5
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 2.9e-136 489.6 502 53.0
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 1.7e-133 480.3 522 51.0
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 1.7e-133 480.3 628 45.2
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 1.8e-130 470.3 332 71.4
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 5.2e-130 468.8 515 48.3
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 5.6e-124 448.7 387 61.0
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 1.8e-122 443.7 447 53.5
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.4e-121 439.5 398 61.1
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 7.6e-121 438.3 328 68.0
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 1.4e-119 434.1 321 68.8
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 5.4e-119 432.2 337 67.4
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 3.6e-115 419.5 321 67.3
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 3.6e-115 419.5 572 45.6
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 1.2e-113 414.5 491 46.4
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 1.4e-111 407.5 281 70.1
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 2.3e-109 400.2 368 57.1
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 2.4e-106 390.2 421 52.5
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 1.5e-105 387.5 379 55.1
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 1.7e-104 384.0 421 48.7
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.0e-101 374.8 401 53.9
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 6.2e-99 365.5 458 45.0
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 1.2e-97 361.3 395 50.1
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 5.5e-95 352.4 213 77.5
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 1.6e-91 340.9 221 73.8
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 2.2e-91 340.5 213 75.6
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 6.3e-83 312.4 240 62.9
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 2.2e-67 260.8 569 32.3
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 1.1e-66 258.5 177 68.4
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 1.1e-63 248.4 243 56.0
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 1.2e-62 245.0 551 32.7
Zm00001eb058540 Zea mays HOM05D005147 ORTHO05D006132 8.0e-62 242.3 214 60.7
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 1.4e-53 214.9 159 66.0
Nitab4.5_0015042g0010 Nicotiana tabacum HOM05D005147 ORTHO05D006132 9.5e-47 192.2 241 44.4
Haze_04614 Corylus avellana HOM05D005147 ORTHO05D006132 1.1e-42 178.7 159 54.1
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 1.3e-40 171.8 491 31.4
FAN16G1629 Fragaria x ananassa HOM05D000071 ORTHO05D006132 1.7e-40 171.4 95 85.3
FAN17G2636 Fragaria x ananassa HOM05D005147 ORTHO05D006132 3.9e-40 170.2 95 83.2
Migut.F02087 Erythranthe guttata HOM05D005147 ORTHO05D006132 1.1e-39 168.7 104 72.1
Atru.chr10.460 Acer truncatum HOM05D005147 ORTHO05D006132 1.5e-39 168.3 104 73.1
ClCG04G001680 Citrullus lanatus HOM05D005147 ORTHO05D006132 3.3e-39 167.2 143 58.7
MBI07_g33483_MAGBIO Magnolia biondii HOM05D005147 ORTHO05D006132 4.3e-39 166.8 164 51.2
SEGI_04471 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 5.2e-37 159.8 115 70.4
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 4.9e-35 153.3 406 31.8
Cc06_g17710 Coffea canephora HOM05D005147 ORTHO05D006132 1.9e-34 151.4 274 38.0
HPP92_011450 Vanilla planifolia HOM05D005147 ORTHO05D006132 4.1e-34 150.2 247 38.1
Migut.F02088 Erythranthe guttata HOM05D005147 ORTHO05D006132 3.4e-28 130.6 135 50.4
FAN03G2245 Fragaria x ananassa HOM05D005147 ORTHO05D006132 5.8e-28 129.8 78 80.8
Haze_04617 Corylus avellana HOM05D005147 ORTHO05D006132 3.7e-27 127.1 69 79.7
vmacro07058 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 6.4e-27 126.3 69 78.3
Haze_04615 Corylus avellana HOM05D005147 ORTHO05D006132 2.4e-26 124.4 81 76.5
C05p37710 Brassica napus HOM05D005147 ORTHO05D006132 4.4e-20 103.6 80 65.0
BcaC06g35123 Brassica carinata HOM05D005147 ORTHO05D006132 5.8e-20 103.2 75 65.3
SEGI_33004 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 9.9e-20 102.4 77 58.4
CDE09G1068 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 1.3e-19 102.1 63 71.4
Hma1.2p1_1029F.1_g249580 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 2.2e-19 101.3 246 31.7
Hma1.2p1_3112F.1_g332769 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 2.2e-19 101.3 246 31.7
BolC9t55790H Brassica oleracea HOM05D005147 ORTHO05D006132 1.1e-18 99.0 80 62.5
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 1.9e-18 98.2 61 63.9
BcaC05g27774 Brassica carinata HOM05D005147 ORTHO05D006132 2.1e-17 94.7 75 60.0
BraA09t41139Z Brassica rapa HOM05D005147 ORTHO05D006132 2.1e-17 94.7 78 59.0
A03p60580 Brassica napus HOM05D005147 ORTHO05D006132 6.0e-17 93.2 78 59.0
C02p46260 Brassica napus HOM05D005147 ORTHO05D006132 2.3e-16 91.3 69 62.3
A09p57480 Brassica napus HOM05D005147 ORTHO05D006132 1.1e-15 89.0 70 60.0
BcaC04g21654 Brassica carinata HOM05D000305 ORTHO05D000065 1.9e-15 88.2 65 64.6
C02p08230 Brassica napus HOM05D005147 ORTHO05D006132 3.6e-14 84.0 78 53.8
Cre07.g328400 Chlamydomonas reinhardtii HOM05D005264 ORTHO05D005428 8.7e-08 62.8 71 42.3
SHI04181 Sapria himalayana HOM05D005264 ORTHO05D005428 7.3e-07 59.7 97 38.1
AagrBONN_evm.TU.Sc2ySwM_344.985 Anthoceros agrestis HOM05D005264 ORTHO05D005428 9.6e-07 59.3 99 32.3
Ciclev10031922m.g Citrus clementina HOM05D005264 ORTHO05D005428 6.2e-06 56.6 67 43.3
SMO172G0032 Selaginella moellendorffii HOM05D002097 ORTHO05D002248 6.2e-06 56.6 254 26.4
CANSAT54G0937 Cannabis sativa HOM05D005264 ORTHO05D005428 8.1e-06 56.2 67 41.8
CiPaw.05G167900 Carya illinoinensis HOM05D005264 ORTHO05D005428 8.1e-06 56.2 67 40.3
Cc11_g02330 Coffea canephora HOM05D005264 ORTHO05D005428 8.1e-06 56.2 67 43.3
Peaxi162Scf00760g00024 Petunia axillaris HOM05D005264 ORTHO05D005428 8.1e-06 56.2 68 42.6
Sc10g0006820 Simmondsia chinensis HOM05D005264 ORTHO05D005428 8.1e-06 56.2 67 41.8


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