Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 8.8e-113 410.2 196 100.0
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 8.2e-103 377.1 195 93.3
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 3.2e-99 365.2 183 96.7
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 3.6e-90 335.1 193 87.0
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.9e-70 269.6 180 75.0
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 5.6e-67 258.1 190 70.5
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 4.6e-61 238.4 146 83.6
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 2.1e-53 213.0 175 62.9
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 2.7e-53 212.6 168 64.3
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 1.4e-49 200.3 164 63.4
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 1.8e-49 199.9 199 55.8
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 2.4e-49 199.5 166 61.4
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 3.1e-49 199.1 175 58.3
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.5e-48 196.8 180 57.2
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 2.0e-48 196.4 169 60.9
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 1.3e-47 193.7 197 53.8
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 1.3e-47 193.7 183 54.6
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 1.7e-47 193.4 137 69.3
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.7e-47 193.4 163 60.1
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 3.8e-47 192.2 133 69.9
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 3.8e-47 192.2 190 54.2
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 4.9e-47 191.8 179 58.1
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 8.4e-47 191.0 141 67.4
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 1.1e-46 190.7 141 67.4
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 1.1e-46 190.7 187 54.0
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 1.1e-46 190.7 137 67.2
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.9e-46 189.9 143 64.3
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 4.2e-46 188.7 134 67.2
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 4.2e-46 188.7 158 58.2
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 7.1e-46 188.0 176 55.1
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.2e-45 187.2 173 57.8
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 1.2e-45 187.2 128 70.3
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 1.6e-45 186.8 141 65.2
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.6e-45 186.8 118 72.0
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 3.5e-45 185.7 160 61.9
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 3.5e-45 185.7 116 75.0
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 4.6e-45 185.3 123 69.9
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 4.6e-45 185.3 137 67.9
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 6.0e-45 184.9 131 69.5
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 6.0e-45 184.9 131 69.5
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 6.0e-45 184.9 174 57.5
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 7.8e-45 184.5 116 73.3
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 7.8e-45 184.5 160 58.1
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 7.8e-45 184.5 146 62.3
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.0e-44 184.1 158 57.0
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 1.3e-44 183.7 118 73.7
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 2.3e-44 183.0 118 71.2
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 2.3e-44 183.0 187 52.9
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 5.1e-44 181.8 137 67.2
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 5.1e-44 181.8 141 63.8
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 2.5e-43 179.5 128 67.2
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 7.3e-43 177.9 148 60.1
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.6e-42 176.8 186 53.8
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.6e-42 176.8 119 68.1
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 2.1e-42 176.4 188 50.0
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 6.2e-42 174.9 148 60.1
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 1.1e-41 174.1 120 70.8
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.8e-41 173.3 165 55.2
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 1.8e-41 173.3 148 60.1
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.2e-40 170.6 130 60.0
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 7.6e-40 167.9 115 67.8
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 9.9e-40 167.5 116 69.8
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 8.4e-39 164.5 130 57.7
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 8.4e-39 164.5 136 59.6
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 1.4e-38 163.7 129 62.0
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 2.4e-38 162.9 192 49.5
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 4.2e-38 162.2 120 62.5
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 7.1e-38 161.4 118 65.3
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 1.0e-36 157.5 98 73.5
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.8e-36 156.8 177 49.2
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 2.3e-36 156.4 175 52.6
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 5.1e-36 155.2 193 48.7
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 5.1e-36 155.2 159 54.1
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 8.7e-36 154.5 119 62.2
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 7.4e-35 151.4 121 56.2
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 2.8e-34 149.4 113 64.6
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 3.7e-34 149.1 117 64.1
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 2.4e-33 146.4 113 59.3
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.9e-33 144.8 178 48.3
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.2e-32 144.1 163 49.7
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.2e-32 144.1 163 49.7
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 1.2e-32 144.1 163 49.7
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 6.4e-31 138.3 98 68.4
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.2e-29 134.0 160 48.8
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 1.1e-25 120.9 76 68.4
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 1.6e-21 107.1 94 52.1
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 2.3e-20 103.2 93 51.6
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 3.0e-20 102.8 102 49.0
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 5.7e-19 98.6 65 73.8
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 1.3e-18 97.4 122 36.9
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 4.8e-18 95.5 70 64.3
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 3.1e-17 92.8 67 65.7
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 3.1e-17 92.8 67 65.7
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 7.7e-08 61.6 46 54.3
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.0e-07 61.2 104 40.4
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.7e-07 60.5 118 33.1
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.7e-07 60.5 47 59.6
TAR627G0568 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.4e-06 57.4 42 61.9
SEGI_02665 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 1.9e-06 57.0 45 57.8


User provided reference genes

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