Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.8e-205 718.4 364 100.0
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.9e-191 671.4 368 94.6
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 8.5e-186 653.7 357 94.7
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 7.4e-182 640.6 329 98.5
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 5.5e-177 624.4 320 98.8
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 2.6e-174 615.5 320 97.5
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 1.5e-161 573.2 320 89.4
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.9e-161 572.8 320 89.1
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 4.5e-155 551.6 320 86.2
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 1.9e-153 546.2 320 85.3
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 2.5e-153 545.8 320 85.0
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 2.5e-153 545.8 320 85.3
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 5.5e-153 544.7 320 85.3
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.4e-151 540.0 320 83.4
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.8e-151 539.7 320 84.1
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 2.3e-151 539.3 317 84.5
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 1.2e-150 537.0 322 83.5
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 1.2e-150 537.0 320 83.1
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 4.9e-149 531.6 320 82.5
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 1.1e-148 530.4 320 81.9
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.4e-148 530.0 319 82.4
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 1.8e-148 529.6 320 82.2
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 2.4e-148 529.3 320 81.9
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.1e-148 528.9 320 81.9
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 3.1e-148 528.9 320 81.2
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 9.5e-145 517.3 328 79.0
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 3.6e-144 515.4 333 78.7
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 2.0e-142 509.6 326 78.5
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 1.3e-141 506.9 327 76.8
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 3.7e-141 505.4 323 78.6
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.4e-140 503.4 327 77.4
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 4.1e-140 501.9 322 77.3
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 5.4e-140 501.5 327 77.1
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 2.7e-139 499.2 323 77.4
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 3.5e-139 498.8 321 78.8
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.0e-138 497.3 328 76.5
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.3e-138 496.9 320 77.2
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 1.3e-138 496.9 320 77.2
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 1.7e-138 496.5 320 77.2
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.7e-138 496.5 320 77.5
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 3.9e-138 495.4 320 75.3
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 3.9e-138 495.4 320 77.2
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 5.0e-138 495.0 320 76.9
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 1.1e-137 493.8 320 76.2
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.9e-137 493.0 320 76.6
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 2.5e-137 492.7 320 76.6
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 3.3e-137 492.3 322 75.2
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 4.3e-137 491.9 323 77.4
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 4.3e-137 491.9 320 76.2
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 5.6e-137 491.5 322 78.0
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-136 490.3 318 77.7
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.6e-136 490.0 321 76.0
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.8e-136 489.2 328 75.3
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 2.8e-136 489.2 327 75.8
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 3.6e-136 488.8 325 76.6
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 4.7e-136 488.4 320 74.4
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 4.7e-136 488.4 320 76.2
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 4.7e-136 488.4 320 76.2
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.1e-135 487.3 328 75.0
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 1.4e-135 486.9 320 76.2
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 3.1e-135 485.7 328 73.2
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 4.0e-135 485.3 320 73.8
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 8.9e-135 484.2 320 73.8
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 1.5e-134 483.4 328 73.5
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 2.6e-134 482.6 324 75.3
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 5.8e-134 481.5 320 73.8
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 5.8e-134 481.5 323 75.9
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 1.3e-133 480.3 320 72.8
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 1.7e-133 479.9 328 72.6
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 2.9e-133 479.2 326 73.9
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.4e-132 474.9 318 75.8
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 7.0e-132 474.6 324 72.8
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.2e-131 473.8 320 73.8
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.1e-129 467.2 317 73.2
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 1.1e-129 467.2 320 71.9
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.5e-129 466.8 299 79.6
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.9e-129 466.5 321 72.3
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.1e-128 463.0 299 78.3
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 4.7e-128 461.8 325 72.6
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 7.5e-126 454.5 320 70.3
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.2e-124 449.1 305 76.1
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.3e-122 443.7 320 70.3
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.1e-120 436.4 303 71.6
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.8e-119 433.3 320 67.8
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.0e-118 429.9 317 66.9
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 2.2e-117 426.4 320 66.6
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.9e-117 426.0 330 65.5
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 2.9e-117 426.0 296 71.3
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 2.4e-116 422.9 320 65.0
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.7e-114 416.8 258 82.6
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.4e-111 407.1 320 64.7
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 1.5e-110 403.7 269 77.0
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 9.9e-110 401.0 319 61.4
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.5e-105 386.3 257 78.6
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.4e-103 380.6 326 57.1
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 2.0e-102 376.7 320 60.3
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.7e-101 373.6 320 61.2
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 4.6e-99 365.5 228 81.1
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 4.6e-99 365.5 316 56.3
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 5.1e-98 362.1 311 59.8
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.5e-97 360.5 319 58.3
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 1.2e-94 350.9 317 54.6
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 7.6e-94 348.2 320 55.3
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.6e-91 340.5 330 53.3
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 8.7e-90 334.7 317 51.7
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.3e-89 332.8 306 61.1
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 5.7e-89 332.0 214 78.5
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 2.4e-87 326.6 294 57.8
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 1.9e-84 317.0 321 49.8
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.1e-83 313.5 287 57.8
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 6.5e-77 292.0 285 54.7
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 4.2e-76 289.3 214 66.8
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 6.9e-71 271.9 297 51.9
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 2.9e-45 186.8 161 60.9
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.7e-38 163.7 121 64.5
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.0e-34 151.8 108 68.5
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 5.2e-34 149.4 272 36.8
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.6e-27 127.9 114 56.1
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.0e-26 125.2 108 62.0
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 8.9e-26 122.1 116 54.3
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.6e-25 120.6 115 53.0
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 7.0e-23 112.5 72 77.8
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 3.9e-21 106.7 368 27.7
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 5.0e-21 106.3 62 75.8
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 5.6e-20 102.8 310 28.4
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 2.5e-12 77.4 62 58.1


User provided reference genes

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