Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G4395 Fragaria x ananassa HOM05D000399 ORTHO05D017712 3.0e-122 441.8 219 100.0
FvH4_2g00900 Fragaria vesca HOM05D000188 ORTHO05D000362 6.8e-21 105.1 102 54.9
FAN24G2461 Fragaria x ananassa HOM05D000188 ORTHO05D000362 1.7e-19 100.5 101 51.5
FvH4_2g00700 Fragaria vesca HOM05D000188 ORTHO05D000362 1.1e-18 97.8 101 50.5
RcHm_v2.0_Chr6g0284721 Rosa chinensis HOM05D000399 ORTHO05D000304 1.4e-18 97.4 61 78.7
FvH4_2g18930 Fragaria vesca HOM05D000399 ORTHO05D000304 3.1e-18 96.3 63 76.2
FAN24G1392 Fragaria x ananassa HOM05D000399 ORTHO05D000304 3.1e-18 96.3 63 76.2
FAN15G1291 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.5e-15 87.4 59 71.2
FvH4_4g12130 Fragaria vesca HOM05D000188 ORTHO05D000362 1.5e-12 77.4 98 45.9
Prupe.8G202000 Prunus persica HOM05D000399 ORTHO05D000304 9.8e-12 74.7 55 67.3
QL09p054073 Quercus lobata HOM05D000399 ORTHO05D000304 1.4e-10 70.9 55 58.2
Eucgr.C03173 Eucalyptus grandis HOM05D000399 ORTHO05D000304 3.1e-10 69.7 60 55.0
TWI63G1283 Tripterygium wilfordii HOM05D000399 ORTHO05D000304 7.0e-10 68.6 53 54.7
Actinidia16900 Actinidia chinensis HOM05D000399 ORTHO05D000304 9.2e-10 68.2 60 58.3
CiPaw.14G040900 Carya illinoinensis HOM05D000399 ORTHO05D000304 1.6e-09 67.4 58 55.2
FAN12G2536 Fragaria x ananassa HOM05D000188 ORTHO05D000362 1.6e-09 67.4 94 43.6
Ciclev10007239m.g Citrus clementina HOM05D000399 ORTHO05D000304 2.0e-09 67.0 63 57.1
Rhsim08G0003600 Rhododendron simsii HOM05D000399 ORTHO05D000304 2.0e-09 67.0 55 61.8
Aqoxy7G04095 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 5.9e-09 65.5 61 54.1
TAR624G0949 Trochodendron aralioides HOM05D000399 ORTHO05D000304 5.9e-09 65.5 55 54.5
Nn8g38601 Nelumbo nucifera HOM05D000399 ORTHO05D000304 7.8e-09 65.1 52 59.6
GSVIVG01035494001 Vitis vinifera HOM05D000399 ORTHO05D000304 7.8e-09 65.1 52 59.6
PGR044G1905 Punica granatum HOM05D000399 ORTHO05D000304 1.0e-08 64.7 51 54.9
Atru.chr7.1826 Acer truncatum HOM05D000399 ORTHO05D000304 1.3e-08 64.3 60 51.7
Aqoxy2G01226 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 2.3e-08 63.5 60 51.7
vmacro18656 Vaccinium macrocarpon HOM05D000399 ORTHO05D000304 2.9e-08 63.2 55 58.2
CARHR049880 Cardamine hirsuta HOM05D000399 ORTHO05D000304 5.0e-08 62.4 76 43.4
Dinv40935 Davidia involucrata HOM05D000399 ORTHO05D000304 6.6e-08 62.0 63 52.4
Prupe.1G401900 Prunus persica HOM05D000399 ORTHO05D000304 1.1e-07 61.2 60 55.0
Duzib150G0526 Durio zibethinus HOM05D000399 ORTHO05D000304 1.5e-07 60.8 55 50.9
Hma1.2p1_1509F.1_g287800 Hydrangea macrophylla HOM05D000399 ORTHO05D017712 1.5e-07 60.8 60 53.3
Sc06g0000120 Simmondsia chinensis HOM05D000399 ORTHO05D000304 1.9e-07 60.5 55 52.7
Lsat_1_v5_gn_8_70500 Lactuca sativa HOM05D000399 ORTHO05D000304 2.5e-07 60.1 51 54.9
Manes.03G056500 Manihot esculenta HOM05D000399 ORTHO05D000304 2.5e-07 60.1 55 52.7
CSS0038361 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D017712 3.3e-07 59.7 60 50.0
Cc08_g06770 Coffea canephora HOM05D000399 ORTHO05D017712 3.3e-07 59.7 60 50.0
Gohir.D13G195300 Gossypium hirsutum HOM05D000399 ORTHO05D000304 3.3e-07 59.7 55 47.3
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 3.3e-07 59.7 53 49.1
AL5G21950 Arabidopsis lyrata HOM05D000399 ORTHO05D000304 7.3e-07 58.5 64 43.8
AUR62013883 Chenopodium quinoa HOM05D000399 ORTHO05D000304 7.3e-07 58.5 63 46.0
Lsat_1_v5_gn_8_70401 Lactuca sativa HOM05D000399 ORTHO05D000304 9.5e-07 58.2 51 52.9
Potri.018G047500 Populus trichocarpa HOM05D000399 ORTHO05D000304 9.5e-07 58.2 60 45.0
Thecc.09G065600 Theobroma cacao HOM05D000399 ORTHO05D000304 9.5e-07 58.2 61 45.9
BcaB02g10763 Brassica carinata HOM05D000399 ORTHO05D000304 1.2e-06 57.8 64 43.8
BcaC01g02230 Brassica carinata HOM05D000399 ORTHO05D000304 1.2e-06 57.8 64 43.8
A06p26820 Brassica napus HOM05D000399 ORTHO05D000304 1.2e-06 57.8 64 43.8
C03p67620 Brassica napus HOM05D000399 ORTHO05D000304 1.2e-06 57.8 64 43.8
BolSC21t60260H Brassica oleracea HOM05D000399 ORTHO05D000304 1.2e-06 57.8 64 43.8
Carub.0005s0970 Capsella rubella HOM05D000399 ORTHO05D000304 1.2e-06 57.8 64 43.8
FvH4_4g36210 Fragaria vesca HOM05D000188 ORTHO05D000362 1.2e-06 57.8 96 39.6
Lj7C209T3 Lonicera japonica HOM05D000399 ORTHO05D000304 1.2e-06 57.8 56 53.6
Sp5g17310 Schrenkiella parvula HOM05D000399 ORTHO05D000304 1.2e-06 57.8 64 43.8
AT3G43920 Arabidopsis thaliana HOM05D000399 ORTHO05D000304 1.6e-06 57.4 64 43.8
ClCG08G009740 Citrullus lanatus HOM05D000399 ORTHO05D000304 1.6e-06 57.4 51 54.9
PSO135G0437 Papaver somniferum HOM05D000399 ORTHO05D000304 1.6e-06 57.4 62 46.8
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 2.1e-06 57.0 55 49.1
Gohir.A06G080450 Gossypium hirsutum HOM05D000399 ORTHO05D000304 2.1e-06 57.0 63 49.2
Gohir.D06G080000 Gossypium hirsutum HOM05D000399 ORTHO05D000304 2.1e-06 57.0 63 49.2
Gorai.010G093100 Gossypium raimondii HOM05D000399 ORTHO05D000304 2.1e-06 57.0 63 49.2
Gorai.013G221400 Gossypium raimondii HOM05D000399 ORTHO05D000304 2.1e-06 57.0 55 45.5
DCAR_004371 Daucus carota HOM05D000399 ORTHO05D000304 2.8e-06 56.6 55 49.1
PSO724G0698 Papaver somniferum HOM05D000399 ORTHO05D000304 2.8e-06 56.6 62 46.8
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 3.6e-06 56.2 52 50.0
DCAR_001243 Daucus carota HOM05D000399 ORTHO05D000304 4.7e-06 55.8 61 49.2
ECA236G0176 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.7e-06 55.8 55 52.7
Carub.0005s0966 Capsella rubella HOM05D000399 ORTHO05D000304 6.1e-06 55.5 64 42.2
Sed0007965 Sechium edule HOM05D000399 ORTHO05D000304 6.1e-06 55.5 51 52.9


User provided reference genes

Program Settings