Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.7e-157 557.4 297 100.0
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 9.4e-66 254.6 142 98.6
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 4.6e-65 252.3 140 97.9
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 7.9e-65 251.5 143 98.6
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.5e-63 247.3 148 94.6
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.2e-62 243.4 140 90.7
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 8.5e-59 231.5 142 81.7
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 5.9e-44 182.2 142 64.1
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 7.7e-44 181.8 145 64.8
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.0e-43 181.4 142 64.1
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 2.2e-43 180.3 154 59.7
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 2.9e-43 179.9 142 60.6
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 2.9e-43 179.9 156 58.3
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 2.9e-43 179.9 145 64.8
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.8e-43 179.5 145 64.8
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 5.0e-43 179.1 142 62.7
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 8.5e-43 178.3 145 64.1
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 1.1e-42 177.9 142 66.2
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 1.5e-42 177.6 146 61.0
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 1.9e-42 177.2 144 63.9
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 3.2e-42 176.4 142 61.3
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 3.2e-42 176.4 142 62.0
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 1.2e-41 174.5 145 60.0
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 2.1e-41 173.7 154 57.1
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 3.6e-41 172.9 154 57.8
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 8.0e-41 171.8 144 61.1
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 8.0e-41 171.8 154 56.5
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 1.0e-40 171.4 142 59.9
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 1.8e-40 170.6 142 60.6
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 1.8e-40 170.6 142 59.9
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.8e-40 170.6 140 60.7
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 2.3e-40 170.2 142 61.3
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 3.0e-40 169.9 144 57.6
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 5.2e-40 169.1 142 59.9
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 5.2e-40 169.1 142 59.9
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 5.2e-40 169.1 147 58.5
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 6.8e-40 168.7 142 59.2
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 8.8e-40 168.3 215 44.7
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 8.8e-40 168.3 215 44.7
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 8.8e-40 168.3 154 55.8
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 8.8e-40 168.3 144 58.3
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.2e-39 167.9 142 59.9
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 1.5e-39 167.5 154 57.8
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 1.5e-39 167.5 142 60.6
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 2.0e-39 167.2 154 55.8
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 2.0e-39 167.2 139 60.4
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 3.4e-39 166.4 146 58.2
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 3.4e-39 166.4 144 56.9
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 5.7e-39 165.6 137 58.4
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 9.7e-39 164.9 142 57.0
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 9.7e-39 164.9 145 57.2
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 9.7e-39 164.9 145 58.6
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 1.3e-38 164.5 142 56.3
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.3e-38 164.5 257 42.0
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.3e-38 164.5 142 58.5
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 1.7e-38 164.1 142 57.0
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 2.2e-38 163.7 132 62.1
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 2.2e-38 163.7 141 53.9
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 2.8e-38 163.3 142 56.3
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 3.7e-38 162.9 142 58.5
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 3.7e-38 162.9 142 57.0
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 4.8e-38 162.5 145 54.5
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 6.3e-38 162.2 154 52.6
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 6.3e-38 162.2 142 56.3
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 1.1e-37 161.4 142 56.3
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 1.1e-37 161.4 155 54.8
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.1e-37 161.4 144 59.0
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 1.4e-37 161.0 142 54.9
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 1.4e-37 161.0 142 57.7
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 2.4e-37 160.2 140 56.4
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 2.4e-37 160.2 154 52.6
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 2.4e-37 160.2 142 55.6
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 3.1e-37 159.8 142 57.0
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 4.1e-37 159.5 143 58.0
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 4.1e-37 159.5 154 51.9
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 4.1e-37 159.5 155 54.2
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 1.2e-36 157.9 142 56.3
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 1.6e-36 157.5 142 52.8
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.6e-36 157.5 137 56.2
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 2.0e-36 157.1 155 53.5
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 2.0e-36 157.1 226 42.0
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 2.7e-36 156.8 141 55.3
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 2.7e-36 156.8 140 57.9
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 3.5e-36 156.4 145 55.2
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 5.9e-36 155.6 140 55.0
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 5.9e-36 155.6 140 57.1
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 7.7e-36 155.2 142 55.6
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 7.7e-36 155.2 154 53.2
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 7.7e-36 155.2 156 51.9
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 1.7e-35 154.1 154 50.6
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 1.7e-35 154.1 213 43.2
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 2.9e-35 153.3 143 55.9
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 2.9e-35 153.3 213 42.7
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 5.0e-35 152.5 155 52.9
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 5.0e-35 152.5 142 54.2
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 6.5e-35 152.1 145 53.1
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 6.5e-35 152.1 142 54.9
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 6.5e-35 152.1 143 52.4
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 1.5e-34 151.0 143 55.2
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 1.5e-34 151.0 143 55.2
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 1.5e-34 151.0 143 55.2
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 1.5e-34 151.0 154 51.3
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 1.9e-34 150.6 142 56.3
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 1.9e-34 150.6 150 50.0
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 2.5e-34 150.2 142 54.2
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 3.2e-34 149.8 155 49.0
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 3.2e-34 149.8 160 46.2
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 4.2e-34 149.4 155 51.6
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 4.2e-34 149.4 155 51.6
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 5.5e-34 149.1 154 50.0
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 1.2e-33 147.9 142 54.9
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.2e-33 147.9 141 54.6
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 1.6e-33 147.5 168 55.4
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.6e-33 147.5 141 56.0
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 2.1e-33 147.1 155 51.0
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 2.1e-33 147.1 148 52.0
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 3.6e-33 146.4 142 51.4
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 4.7e-33 146.0 154 50.0
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 8.0e-33 145.2 142 51.4
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 1.0e-32 144.8 155 49.0
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 1.4e-32 144.4 140 53.6
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 1.4e-32 144.4 141 53.9
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 5.2e-32 142.5 212 42.0
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 1.2e-31 141.4 140 50.7
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 1.5e-31 141.0 219 39.7
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 2.6e-31 140.2 125 55.2
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 3.4e-31 139.8 142 50.0
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 1.3e-30 137.9 154 47.4
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 2.2e-30 137.1 145 49.7
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 7.0e-29 132.1 141 48.9
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 1.6e-28 131.0 142 45.8
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 6.6e-27 125.6 121 53.7
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 6.6e-27 125.6 176 40.9
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 6.8e-24 115.5 100 59.0
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 9.8e-23 111.7 142 43.0
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 9.8e-23 111.7 97 56.7
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 1.7e-22 110.9 145 42.8
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 4.1e-21 106.3 243 33.3
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 2.9e-19 100.1 141 45.4
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 8.6e-19 98.6 142 38.7
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 2.3e-16 90.5 97 46.4
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 3.1e-16 90.1 47 87.2
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 8.9e-16 88.6 146 36.3
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 1.2e-15 88.2 48 85.4
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 3.7e-14 83.2 46 80.4
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.9e-13 80.9 62 66.1
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 2.0e-12 77.4 39 89.7
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 2.7e-12 77.0 37 94.6
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 3.5e-12 76.6 39 82.1
FAN06G3132 Fragaria x ananassa HOM05D004719 ORTHO05D005519 8.6e-11 72.0 45 75.6
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 2.3e-08 63.9 68 42.6
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 6.8e-08 62.4 113 41.6
FAN25G3581 Fragaria x ananassa HOM05D017504 ORTHO05D022678 1.5e-07 61.2 36 80.6
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 2.2e-06 57.4 51 54.9
Sopen06g012490 Solanum pennellii HOM05D004719 ORTHO05D005519 8.3e-06 55.5 50 52.0


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