Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4151 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-70 268.9 130 100.0
FAN14G0992 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.5e-55 216.9 130 83.8
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-52 209.5 129 81.4
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.8e-52 206.8 129 79.8
FAN09G2457 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.5e-47 192.2 129 75.2
FAN05G5003 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.4e-44 181.8 106 82.1
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 5.6e-39 164.5 129 62.8
FvH4_1g22022 Fragaria vesca HOM05D002480 ORTHO05D003145 8.9e-37 157.1 129 55.8
FvH4_2g07601 Fragaria vesca HOM05D002480 ORTHO05D003145 4.9e-35 151.4 126 54.0
FAN12G1965 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-33 146.0 128 53.9
FvH4_5g30551 Fragaria vesca HOM05D002480 ORTHO05D003145 6.6e-32 141.0 129 62.0
FvH4_2g24951 Fragaria vesca HOM05D002480 ORTHO05D003145 1.6e-30 136.3 110 53.6
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.2e-30 134.4 108 60.2
FAN10G2799 Fragaria x ananassa HOM05D000125 ORTHO05D000120 4.0e-29 131.7 92 64.1
FAN04G3005 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-29 131.3 110 57.3
FAN15G1816 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-29 131.3 119 54.6
FAN18G3828 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-28 129.0 77 80.5
FvH4_6g07931 Fragaria vesca HOM05D002480 ORTHO05D003145 2.2e-27 125.9 66 89.4
FvH4_6g28831 Fragaria vesca HOM05D002480 ORTHO05D003145 2.2e-27 125.9 76 81.6
FvH4_4g05732 Fragaria vesca HOM05D002480 ORTHO05D003145 3.7e-27 125.2 105 53.3
FAN17G1313 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.9e-27 124.8 117 50.4
FAN20G0719 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.9e-27 124.8 129 50.4
FvH4_7g18780 Fragaria vesca HOM05D002480 ORTHO05D003145 4.6e-25 118.2 93 62.4
FAN02G1343 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.9e-24 115.2 130 43.1
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.6e-24 114.4 130 43.1
FAN18G1519 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-23 113.6 107 54.2
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-23 113.6 130 42.3
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-23 113.2 130 43.1
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-23 113.2 130 43.1
FAN28G0569 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-23 112.8 130 42.3
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.3e-23 111.7 130 42.3
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-22 109.8 130 42.3
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.7e-22 108.2 130 41.5
FAN03G2236 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.1e-22 107.5 130 40.8
FAN15G2272 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-21 107.1 94 52.1
FAN05G0293 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-21 106.7 66 77.3
FAN02G4274 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-21 106.3 112 53.6
FvH4_4g13551 Fragaria vesca HOM05D002480 ORTHO05D003145 6.8e-21 104.4 130 37.7
FAN13G1471 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-20 102.8 109 48.6
FAN26G2394 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-20 102.4 111 41.4
FAN24G3444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.6e-20 100.9 78 55.1
FvH4_5g05871 Fragaria vesca HOM05D002480 ORTHO05D003145 9.9e-20 100.5 117 40.2
FvH4_1g20081 Fragaria vesca HOM05D002480 ORTHO05D003145 8.4e-19 97.4 124 41.9
FAN23G1644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.4e-19 97.4 100 45.0
FAN06G5011 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-18 96.3 100 45.0
FAN06G2080 Fragaria x ananassa HOM05D000125 ORTHO05D000120 2.4e-18 95.9 70 65.7
FAN12G0049 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.2e-18 95.1 97 46.4
FAN05G4362 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-17 93.6 99 44.4
FAN08G1660 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-17 93.6 86 50.0
FAN19G0554 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-17 92.8 123 38.2
FvH4_4g26661 Fragaria vesca HOM05D002480 ORTHO05D003145 2.7e-17 92.4 130 40.0
FvH4_7g10071 Fragaria vesca HOM05D002480 ORTHO05D003145 2.7e-17 92.4 129 39.5
FAN15G1902 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-17 92.0 98 43.9
FAN26G0220 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-17 92.0 98 43.9
FAN01G2328 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.0e-17 91.3 66 65.2
FAN12G2566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-16 90.1 66 63.6
FAN20G1631 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-16 89.7 95 45.3
FvH4_6g41261 Fragaria vesca HOM05D002480 ORTHO05D003145 5.1e-16 88.2 66 59.1
FAN16G1534 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.1e-16 88.2 115 40.0
FAN25G1938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.1e-16 88.2 92 45.7
FAN10G3390 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.6e-16 87.8 129 38.0
FAN10G3968 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.6e-16 87.8 121 40.5
FAN28G0509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.6e-16 87.8 103 40.8
FAN03G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-15 87.0 127 39.4
FAN14G1490 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-15 87.0 66 57.6
FAN14G5134 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-15 87.0 107 40.2
FAN18G1209 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-15 86.7 98 42.9
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 5.6e-15 84.7 98 40.8
FvH4_2g04010 Fragaria vesca HOM05D002480 ORTHO05D003145 7.3e-15 84.3 129 39.5
FAN21G2625 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.3e-15 84.3 66 59.1
FAN05G0708 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-14 83.2 127 39.4
FAN16G1666 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-14 82.8 72 51.4
FAN05G0789 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-13 80.1 55 74.5
FAN15G0005 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.4e-13 80.1 122 36.9
FAN06G4257 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-13 79.3 130 35.4
FAN04G1189 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-13 77.8 115 38.3
FAN09G0095 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-13 77.8 129 37.2
FvH4_7g16371 Fragaria vesca HOM05D008430 ORTHO05D010682 9.0e-13 77.4 114 36.8
FAN04G2250 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-12 77.0 126 38.9
FAN06G4463 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-12 77.0 92 40.2
FvH4_5g30200 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-12 76.6 78 51.3
FvH4_4g12651 Fragaria vesca HOM05D008430 ORTHO05D010682 2.0e-12 76.3 87 41.4
FAN16G3475 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-12 76.3 99 38.4
FvH4_6g03011 Fragaria vesca HOM05D008430 ORTHO05D010682 2.6e-12 75.9 122 35.2
FAN21G2545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-12 75.9 71 50.7
FvH4_4g07081 Fragaria vesca HOM05D008119 ORTHO05D010214 5.8e-12 74.7 117 33.3
FAN06G0233 Fragaria x ananassa HOM05D008430 ORTHO05D010682 5.8e-12 74.7 114 36.0
FAN11G1368 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.6e-12 74.3 112 35.7
FAN25G0390 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.6e-12 74.3 92 37.0
FAN10G1838 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.3e-11 73.6 117 35.0
FAN13G3053 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-11 73.2 92 38.0
RcHm_v2.0_Chr6g0265791 Rosa chinensis HOM05D003375 ORTHO05D004719 1.7e-11 73.2 110 28.2
FAN02G1315 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.2e-11 72.8 89 36.0
FAN02G4154 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.2e-11 72.8 89 36.0
FAN05G0275 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.2e-11 72.8 110 34.5
FAN06G0355 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.2e-11 72.8 114 35.1
FAN25G2489 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.2e-11 72.8 113 35.4
FAN21G1308 Fragaria x ananassa HOM05D008430 ORTHO05D010682 4.9e-11 71.6 108 34.3
FAN18G1129 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.4e-11 71.2 87 39.1
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 6.4e-11 71.2 116 27.6
FvH4_4g13621 Fragaria vesca HOM05D002480 ORTHO05D003145 8.4e-11 70.9 125 35.2
FAN21G1872 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.4e-11 70.9 87 37.9
FAN12G2038 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-10 70.5 83 43.4
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-10 70.1 75 42.7
FAN08G3242 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-10 69.7 44 70.5
COL.COLO4_33327 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.2e-10 68.9 107 28.0
FvH4_7g00030 Fragaria vesca HOM05D002480 ORTHO05D003145 3.2e-10 68.9 115 36.5
COL.COLO4_27452 Corchorus olitorius HOM05D013553 ORTHO05D000126 4.2e-10 68.6 115 31.3
FAN14G0936 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.4e-10 68.2 42 71.4
FAN14G4423 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.4e-10 68.2 41 82.9
FAN05G3338 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.3e-10 67.4 89 33.7
FAN06G1617 Fragaria x ananassa HOM05D008119 ORTHO05D010214 9.3e-10 67.4 117 33.3
FvH4_7g00272 Fragaria vesca HOM05D008119 ORTHO05D010214 1.2e-09 67.0 117 33.3
FAN21G3182 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-09 67.0 73 41.1
LjContig00408g0002404 Lotus japonicus HOM05D000003 ORTHO05D000126 1.6e-09 66.6 113 27.4
FAN14G0918 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-09 65.5 59 47.5
FAN14G2911 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-09 65.5 59 47.5
FAN24G1866 Fragaria x ananassa HOM05D002480 ORTHO05D046333 3.5e-09 65.5 117 32.5
FvH4_5g30830 Fragaria vesca HOM05D002480 ORTHO05D003145 4.6e-09 65.1 83 42.2
FAN14G5285 Fragaria x ananassa HOM05D008430 ORTHO05D010682 4.6e-09 65.1 122 32.8
FvH4_4g01621 Fragaria vesca HOM05D008119 ORTHO05D010214 6.0e-09 64.7 110 32.7
FAN07G2346 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.8e-09 64.3 84 34.5
COL.COLO4_27112 Corchorus olitorius HOM05D021065 ORTHO05D000126 1.0e-08 63.9 92 27.2
FvH4_2g11910 Fragaria vesca HOM05D002480 ORTHO05D046333 1.0e-08 63.9 117 31.6
FAN15G2755 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-08 63.9 150 28.0
FAN12G4356 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.3e-08 63.5 110 31.8
QL04p002610 Quercus lobata HOM05D000038 ORTHO05D000126 1.3e-08 63.5 92 30.4
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-08 63.5 114 23.7
FvH4_1g27932 Fragaria vesca HOM05D002480 ORTHO05D003145 1.7e-08 63.2 81 39.5
FAN13G0055 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-08 62.8 134 32.8
FAN25G0652 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.3e-08 62.8 75 36.0
FAN13G2412 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.0e-08 62.4 69 43.5
TWI23G1165 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 3.0e-08 62.4 118 30.5
COL.COLO4_33502 Corchorus olitorius HOM05D013553 ORTHO05D000126 5.1e-08 61.6 79 35.4
FvH4_3g34441 Fragaria vesca HOM05D002480 ORTHO05D003145 5.1e-08 61.6 84 33.3
COL.COLO4_15219 Corchorus olitorius HOM05D013553 ORTHO05D000126 6.6e-08 61.2 103 30.1
FAN13G0545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.6e-08 61.2 101 34.7
Lj4g0001415 Lotus japonicus HOM05D000003 ORTHO05D000126 6.6e-08 61.2 111 26.1
COL.COLO4_34268 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.7e-08 60.8 83 31.3
FvH4_2g18601 Fragaria vesca HOM05D002480 ORTHO05D003145 1.1e-07 60.5 43 60.5
FAN18G2574 Fragaria x ananassa HOM05D008973 ORTHO05D010682 1.1e-07 60.5 94 28.7
FAN05G3618 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-07 60.1 97 27.8
FAN11G3034 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.5e-07 60.1 89 33.7
QL05p085174 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-07 60.1 97 35.1
Haze_24509 Corylus avellana HOM05D000003 ORTHO05D000126 1.9e-07 59.7 103 27.2
TWI31G0464 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.9e-07 59.7 118 30.5
BcaB08g35267 Brassica carinata HOM05D003728 ORTHO05D000007 2.5e-07 59.3 97 30.9
FvH4_7g08120 Fragaria vesca HOM05D002480 ORTHO05D003145 2.5e-07 59.3 60 41.7
FAN06G0850 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.5e-07 59.3 62 40.3
BolC1t03150H Brassica oleracea HOM05D003728 ORTHO05D000007 3.3e-07 58.9 97 33.0
FAN18G1980 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.3e-07 58.9 38 78.9
FAN07G0316 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.3e-07 58.5 108 30.6
Lj1g0020376 Lotus japonicus HOM05D000003 ORTHO05D000126 4.3e-07 58.5 102 29.4
QL06p031816 Quercus lobata HOM05D000003 ORTHO05D000126 4.3e-07 58.5 99 29.3
QL01p000768 Quercus lobata HOM05D000003 ORTHO05D000126 5.6e-07 58.2 113 24.8
QL10p058267 Quercus lobata HOM05D000003 ORTHO05D000126 5.6e-07 58.2 113 24.8
BraA09t40138Z Brassica rapa HOM05D014043 ORTHO05D016085 9.6e-07 57.4 104 25.0
AUR62001732 Chenopodium quinoa HOM05D000003 ORTHO05D000126 9.6e-07 57.4 118 23.7
FvH4_5g24922 Fragaria vesca HOM05D002480 ORTHO05D003145 1.3e-06 57.0 65 41.5
QL04p035245 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 57.0 98 30.6
AUR62022172 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.6e-06 56.6 118 26.3
BcaC01g03492 Brassica carinata HOM05D014043 ORTHO05D016085 2.1e-06 56.2 104 25.0
AUR62036262 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.1e-06 56.2 95 25.3
FAN02G0444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-06 56.2 96 29.2
FAN08G2294 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.1e-06 56.2 107 32.7
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-06 55.8 117 28.2
BcaB05g21836 Brassica carinata HOM05D003728 ORTHO05D000006 2.8e-06 55.8 100 26.0
BcaC05g24862 Brassica carinata HOM05D014043 ORTHO05D016085 2.8e-06 55.8 104 24.0
QL03p061024 Quercus lobata HOM05D000003 ORTHO05D000126 2.8e-06 55.8 99 28.3
QL06p038048 Quercus lobata HOM05D000029 ORTHO05D001395 2.8e-06 55.8 118 24.6
Atru.chr11.754 Acer truncatum HOM05D000003 ORTHO05D000007 3.6e-06 55.5 117 26.5
BcaNung02700 Brassica carinata HOM05D003728 ORTHO05D000007 3.6e-06 55.5 97 29.9
FAN16G3622 Fragaria x ananassa HOM05D003375 ORTHO05D004719 3.6e-06 55.5 77 32.5
FAN22G0625 Fragaria x ananassa HOM05D017501 ORTHO05D020690 3.6e-06 55.5 81 28.4
BraA10t44622Z Brassica rapa HOM05D000003 ORTHO05D000006 4.8e-06 55.1 103 29.1
FAN09G4566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.8e-06 55.1 111 32.4
RcHm_v2.0_Chr1g0320861 Rosa chinensis HOM05D009201 ORTHO05D005238 4.8e-06 55.1 119 23.5
Lj3g0024247 Lotus japonicus HOM05D000003 ORTHO05D000126 6.2e-06 54.7 105 25.7
QL04p035086 Quercus lobata HOM05D000003 ORTHO05D000126 6.2e-06 54.7 98 29.6
BcaC09g50262 Brassica carinata HOM05D003728 ORTHO05D000007 8.1e-06 54.3 97 27.8
C02p38950 Brassica napus HOM05D003728 ORTHO05D000007 8.1e-06 54.3 97 27.8
BolC2t09907H Brassica oleracea HOM05D003728 ORTHO05D000007 8.1e-06 54.3 97 27.8
AUR62005685 Chenopodium quinoa HOM05D000003 ORTHO05D000126 8.1e-06 54.3 105 22.9
Eucgr.D02404 Eucalyptus grandis HOM05D000003 ORTHO05D000126 8.1e-06 54.3 116 26.7
FAN17G0913 Fragaria x ananassa HOM05D003375 ORTHO05D004719 8.1e-06 54.3 88 26.1
QL04p084567 Quercus lobata HOM05D000003 ORTHO05D000126 8.1e-06 54.3 96 28.1
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.1e-06 54.3 118 27.1


User provided reference genes

Program Settings