Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0176 Fragaria x ananassa HOM05D012507 ORTHO05D011638 1.1e-107 393.3 201 100.0
FAN05G1598 Fragaria x ananassa HOM05D012507 ORTHO05D011638 4.8e-106 387.9 201 99.5
FAN14G1918 Fragaria x ananassa HOM05D012507 ORTHO05D011638 4.5e-88 328.2 221 82.8
FAN02G4355 Fragaria x ananassa HOM05D012507 ORTHO05D011638 1.4e-84 316.6 221 81.0
FAN09G1505 Fragaria x ananassa HOM05D012507 ORTHO05D011638 7.0e-57 224.6 220 62.3
FAN09G3761 Fragaria x ananassa HOM05D012507 ORTHO05D011638 2.7e-56 222.6 220 61.8
FvH4_6g04511 Fragaria vesca HOM05D014759 ORTHO05D011638 8.6e-55 217.6 148 79.7
RcHm_v2.0_Chr3g0453121 Rosa chinensis HOM05D000439 ORTHO05D011638 1.9e-49 199.9 202 59.4
FvH4_6g04640 Fragaria vesca HOM05D000439 ORTHO05D035280 5.2e-44 181.8 201 56.2
FAN02G2309 Fragaria x ananassa HOM05D000439 ORTHO05D011638 1.1e-38 164.1 183 55.2
FAN05G5064 Fragaria x ananassa HOM05D000439 ORTHO05D011638 5.6e-30 135.2 142 56.3
RcHm_v2.0_Chr3g0453101 Rosa chinensis HOM05D014759 ORTHO05D011638 1.6e-24 117.1 143 53.1
FvH4_6g04630 Fragaria vesca HOM05D014759 ORTHO05D011638 1.0e-23 114.4 143 49.0
FvH4_6g04650 Fragaria vesca HOM05D012507 ORTHO05D045805 3.0e-23 112.8 68 91.2
FAN02G3337 Fragaria x ananassa HOM05D014759 ORTHO05D011638 3.3e-22 109.4 143 49.0
FAN05G1969 Fragaria x ananassa HOM05D000439 ORTHO05D011638 9.6e-22 107.8 126 50.8
Prupe.6G334200 Prunus persica HOM05D000439 ORTHO05D002302 4.9e-18 95.5 170 41.2
Prupe.6G334400 Prunus persica HOM05D000439 ORTHO05D002302 1.1e-17 94.4 182 41.2
MD12G1229100 Malus domestica HOM05D000439 ORTHO05D002302 2.1e-16 90.1 171 40.4
FvH4_6g04380 Fragaria vesca HOM05D000439 ORTHO05D002302 4.6e-16 89.0 176 38.1
FAN14G5795 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.7e-15 87.0 176 38.1
Prupe.6G334600 Prunus persica HOM05D000439 ORTHO05D002302 3.0e-15 86.3 151 41.1
MD04G1214500 Malus domestica HOM05D000439 ORTHO05D002302 1.5e-14 84.0 183 39.9
FvH4_6g04591 Fragaria vesca HOM05D014759 ORTHO05D011638 2.5e-14 83.2 120 46.7
RcHm_v2.0_Chr3g0453001 Rosa chinensis HOM05D000439 ORTHO05D002302 7.3e-14 81.6 178 36.0
FAN09G3873 Fragaria x ananassa HOM05D000439 ORTHO05D002302 2.8e-13 79.7 173 36.4
FAN09G0983 Fragaria x ananassa HOM05D000439 ORTHO05D002302 6.2e-13 78.6 173 36.4
FAN05G1628 Fragaria x ananassa HOM05D000439 ORTHO05D002302 8.1e-13 78.2 168 37.5
FAN05G4994 Fragaria x ananassa HOM05D000439 ORTHO05D002302 8.1e-13 78.2 168 37.5
FvH4_6g04430 Fragaria vesca HOM05D014759 ORTHO05D011638 1.1e-12 77.8 99 47.5
RcHm_v2.0_Chr3g0452981 Rosa chinensis HOM05D000439 ORTHO05D002302 1.4e-12 77.4 188 32.4
RcHm_v2.0_Chr3g0453051 Rosa chinensis HOM05D000439 ORTHO05D002302 1.4e-12 77.4 163 36.8
FvH4_6g04320 Fragaria vesca HOM05D000439 ORTHO05D002302 4.0e-12 75.9 166 34.3
RcHm_v2.0_Chr7g0237441 Rosa chinensis HOM05D000439 ORTHO05D002302 5.3e-12 75.5 160 36.2
FvH4_6g04310 Fragaria vesca HOM05D000439 ORTHO05D002302 6.9e-12 75.1 168 36.9
FAN14G3490 Fragaria x ananassa HOM05D000439 ORTHO05D002302 9.0e-12 74.7 175 30.9
RcHm_v2.0_Chr3g0453091 Rosa chinensis HOM05D000439 ORTHO05D002302 1.2e-11 74.3 169 37.3
MD12G1228900 Malus domestica HOM05D000439 ORTHO05D002302 1.5e-11 73.9 166 34.3
RcHm_v2.0_Chr3g0452991 Rosa chinensis HOM05D000439 ORTHO05D002302 1.5e-11 73.9 184 31.0
RcHm_v2.0_Chr3g0453081 Rosa chinensis HOM05D000439 ORTHO05D002302 1.5e-11 73.9 168 37.5
FvH4_6g04420 Fragaria vesca HOM05D000439 ORTHO05D002302 2.0e-11 73.6 172 30.8
Prupe.1G243600 Prunus persica HOM05D000439 ORTHO05D002302 2.6e-11 73.2 140 37.9
FAN13G3290 Fragaria x ananassa HOM05D000439 ORTHO05D002302 3.4e-11 72.8 165 31.5
MD12G1229900 Malus domestica HOM05D000439 ORTHO05D002302 3.4e-11 72.8 141 38.3
FAN09G1898 Fragaria x ananassa HOM05D000439 ORTHO05D011638 7.6e-11 71.6 191 30.4
MD12G1229200 Malus domestica HOM05D000439 ORTHO05D002302 7.6e-11 71.6 141 37.6
MD14G1011100 Malus domestica HOM05D000439 ORTHO05D002302 7.6e-11 71.6 171 35.1
FAN14G4802 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.7e-10 70.5 187 31.6
FAN04G2682 Fragaria x ananassa HOM05D000439 ORTHO05D002302 3.8e-10 69.3 160 31.9
RcHm_v2.0_Chr7g0205851 Rosa chinensis HOM05D000439 ORTHO05D002302 3.8e-10 69.3 168 35.1
FvH4_6g04410 Fragaria vesca HOM05D000439 ORTHO05D002302 4.9e-10 68.9 176 32.4
RcHm_v2.0_Chr3g0453041 Rosa chinensis HOM05D000439 ORTHO05D002302 4.9e-10 68.9 167 33.5
FAN14G1718 Fragaria x ananassa HOM05D000439 ORTHO05D011638 6.4e-10 68.6 186 30.6
RcHm_v2.0_Chr3g0453021 Rosa chinensis HOM05D000439 ORTHO05D011638 8.4e-10 68.2 102 40.2
FvH4_5g20491 Fragaria vesca HOM05D000439 ORTHO05D002302 1.1e-09 67.8 166 31.9
FvH4_6g04400 Fragaria vesca HOM05D000439 ORTHO05D011638 1.1e-09 67.8 186 30.6
FAN18G3868 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.1e-09 67.8 166 31.9
MD03G1060500 Malus domestica HOM05D000439 ORTHO05D002302 1.1e-09 67.8 141 38.3
Prupe.6G334700 Prunus persica HOM05D000439 ORTHO05D002302 1.4e-09 67.4 188 34.0
FAN09G4025 Fragaria x ananassa HOM05D000439 ORTHO05D002302 4.2e-09 65.9 172 31.4
CiPaw.07G011500 Carya illinoinensis HOM05D000439 ORTHO05D002302 2.1e-08 63.5 154 33.8
MD12G1013700 Malus domestica HOM05D000439 ORTHO05D002302 2.1e-08 63.5 175 35.4
FvH4_6g04550 Fragaria vesca HOM05D000439 ORTHO05D002302 2.7e-08 63.2 165 35.8
MD04G1214700 Malus domestica HOM05D000439 ORTHO05D002302 2.7e-08 63.2 146 32.9
FvH4_6g04560 Fragaria vesca HOM05D014759 ORTHO05D011638 3.5e-08 62.8 69 50.7
FAN02G2397 Fragaria x ananassa HOM05D014759 ORTHO05D011638 4.6e-08 62.4 80 45.0
Duzib106G1037 Durio zibethinus HOM05D000439 ORTHO05D002302 1.0e-07 61.2 184 29.9
QL03p002694 Quercus lobata HOM05D000439 ORTHO05D002302 1.3e-07 60.8 131 35.9
arahy.Tifrunner.gnm1.ann1.8T23IY Arachis hypogaea HOM05D000439 ORTHO05D002302 1.8e-07 60.5 166 25.9
Lj3g0018557 Lotus japonicus HOM05D000439 ORTHO05D002302 1.8e-07 60.5 138 31.2
arahy.Tifrunner.gnm1.ann1.9L902K Arachis hypogaea HOM05D000439 ORTHO05D002302 2.3e-07 60.1 166 25.3
FvH4_6g04570 Fragaria vesca HOM05D001702 ORTHO05D035280 2.3e-07 60.1 46 69.6
Gohir.D13G104000 Gossypium hirsutum HOM05D000439 ORTHO05D002302 2.3e-07 60.1 116 35.3
Glyma.11G109500 Glycine max HOM05D000439 ORTHO05D002302 3.9e-07 59.3 180 32.2
FvH4_6g04261 Fragaria vesca HOM05D000439 ORTHO05D002302 5.1e-07 58.9 164 31.1
Gorai.013G116600 Gossypium raimondii HOM05D000439 ORTHO05D002302 5.1e-07 58.9 116 35.3
Medtr6g045183 Medicago truncatula HOM05D000439 ORTHO05D002302 5.1e-07 58.9 160 30.6
COL.COLO4_36064 Corchorus olitorius HOM05D000439 ORTHO05D002302 8.7e-07 58.2 133 36.1
FAN05G1097 Fragaria x ananassa HOM05D004471 ORTHO05D005345 8.7e-07 58.2 129 34.1
Lalb_Chr01g0000841 Lupinus albus HOM05D000439 ORTHO05D002302 8.7e-07 58.2 117 31.6
RcHm_v2.0_Chr2g0124181 Rosa chinensis HOM05D000439 ORTHO05D002302 8.7e-07 58.2 145 33.8
RcHm_v2.0_Chr4g0411451 Rosa chinensis HOM05D000439 ORTHO05D002302 8.7e-07 58.2 62 50.0
TPR.G32660 Trifolium pratense HOM05D000439 ORTHO05D002302 8.7e-07 58.2 168 30.4
FvH4_6g04431 Fragaria vesca HOM05D000439 ORTHO05D002302 1.1e-06 57.8 164 34.1
FAN10G0860 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.1e-06 57.8 161 34.2
Rhsim01G0002600 Rhododendron simsii HOM05D000439 ORTHO05D001363 1.5e-06 57.4 136 30.1
Ca_20059_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 1.9e-06 57.0 163 28.2
Dinv26587 Davidia involucrata HOM05D000439 ORTHO05D002302 1.9e-06 57.0 169 30.2
Psat5g275960 Pisum sativum HOM05D000439 ORTHO05D002302 1.9e-06 57.0 145 33.1
CSS0036023 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D002302 2.5e-06 56.6 156 28.8
Sabra05G0040900 Salix brachista HOM05D000106 ORTHO05D002214 2.5e-06 56.6 124 33.9
FvH4_6g04390 Fragaria vesca HOM05D000439 ORTHO05D002302 3.3e-06 56.2 160 33.1
RcHm_v2.0_Chr3g0452971 Rosa chinensis HOM05D000439 ORTHO05D002302 3.3e-06 56.2 107 35.5
FAN10G1224 Fragaria x ananassa HOM05D000439 ORTHO05D002302 4.3e-06 55.8 120 38.3
vmacro05059 Vaccinium macrocarpon HOM05D000439 ORTHO05D001363 4.3e-06 55.8 205 25.9
Duzib177G0767 Durio zibethinus HOM05D000439 ORTHO05D002302 5.6e-06 55.5 150 28.7
Gohir.A11G236340 Gossypium hirsutum HOM05D000439 ORTHO05D002302 5.6e-06 55.5 122 32.8
Lalb_Chr14g0367481 Lupinus albus HOM05D000439 ORTHO05D002302 5.6e-06 55.5 118 33.1
CSS0004188 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D002302 7.4e-06 55.1 163 27.0
FAN06G0028 Fragaria x ananassa HOM05D019505 ORTHO05D002302 7.4e-06 55.1 119 38.7
FAN06G4462 Fragaria x ananassa HOM05D000439 ORTHO05D002302 7.4e-06 55.1 162 33.3
Lj4g0018346 Lotus japonicus HOM05D000439 ORTHO05D002302 9.6e-06 54.7 114 35.1
Peaxi162Scf00372g00049 Petunia axillaris HOM05D000439 ORTHO05D001363 9.6e-06 54.7 176 28.4


User provided reference genes

Program Settings