Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1572 Fragaria x ananassa HOM05D000382 ORTHO05D000391 4.1e-37 157.5 79 100.0
FvH4_6g25330 Fragaria vesca HOM05D000382 ORTHO05D000391 5.8e-31 137.1 68 100.0
FAN09G4746 Fragaria x ananassa HOM05D000382 ORTHO05D000391 3.8e-30 134.4 68 98.5
RcHm_v2.0_Chr2g0125681 Rosa chinensis HOM05D000382 ORTHO05D000391 6.6e-27 123.6 68 89.7
Prupe.7G037900 Prunus persica HOM05D000382 ORTHO05D000391 1.4e-24 115.9 68 83.8
MD12G1096400 Malus domestica HOM05D000382 ORTHO05D000391 3.4e-23 111.3 68 79.4
MD14G1089200 Malus domestica HOM05D000382 ORTHO05D000391 2.9e-22 108.2 70 75.7
CANSAT64G1252 Cannabis sativa HOM05D000382 ORTHO05D000391 7.8e-20 100.1 68 69.1
QL07p010459 Quercus lobata HOM05D000382 ORTHO05D000391 4.3e-18 94.4 70 65.7
Atru.chr1.1437 Acer truncatum HOM05D000382 ORTHO05D000391 5.6e-18 94.0 78 59.0
PGR142G0816 Punica granatum HOM05D000382 ORTHO05D000391 6.2e-17 90.5 67 65.7
Hund19094 Selenicereus undatus HOM05D000382 ORTHO05D000391 1.8e-16 89.0 68 58.8
Duzib106G1032 Durio zibethinus HOM05D000382 ORTHO05D000391 6.9e-16 87.0 78 56.4
Potri.016G036500 Populus trichocarpa HOM05D000382 ORTHO05D000391 6.9e-16 87.0 70 62.9
Thecc.05G115300 Theobroma cacao HOM05D000382 ORTHO05D000391 9.0e-16 86.7 78 59.0
GSVIVG01033632001 Vitis vinifera HOM05D000382 ORTHO05D000391 2.0e-15 85.5 68 63.2
CiPaw.10G040300 Carya illinoinensis HOM05D000382 ORTHO05D000391 7.6e-15 83.6 65 60.0
ClCG10G016250 Citrullus lanatus HOM05D000382 ORTHO05D000391 9.9e-15 83.2 79 59.5
MELO3C009753.2 Cucumis melo HOM05D000382 ORTHO05D000391 1.3e-14 82.8 79 59.5
Eucgr.A02240 Eucalyptus grandis HOM05D000382 ORTHO05D000391 1.7e-14 82.4 68 60.3
Sc13g0001120 Simmondsia chinensis HOM05D000382 ORTHO05D000391 2.9e-14 81.6 70 52.9
Cfa020003 Carpinus fangiana HOM05D000382 ORTHO05D000391 4.9e-14 80.9 65 58.5
Cpa.g.sc5.165 Carica papaya HOM05D000382 ORTHO05D000391 6.4e-14 80.5 70 54.3
Manes.09G004500 Manihot esculenta HOM05D000382 ORTHO05D000391 6.4e-14 80.5 68 58.8
Nn2g14774 Nelumbo nucifera HOM05D000382 ORTHO05D000391 1.1e-13 79.7 70 50.0
TWI74G1315 Tripterygium wilfordii HOM05D000382 ORTHO05D000391 5.4e-13 77.4 69 59.4
Sed0025343 Sechium edule HOM05D000382 ORTHO05D000391 9.3e-13 76.6 77 55.8
Haze_20230 Corylus avellana HOM05D000382 ORTHO05D000391 1.6e-12 75.9 62 56.5
TAR633G2046 Trochodendron aralioides HOM05D000382 ORTHO05D000391 1.6e-12 75.9 68 54.4
Actinidia17695 Actinidia chinensis HOM05D000382 ORTHO05D000391 2.1e-12 75.5 70 50.0
Nn7g36753 Nelumbo nucifera HOM05D000382 ORTHO05D000391 3.5e-12 74.7 67 49.3
TAR623G0597 Trochodendron aralioides HOM05D000382 ORTHO05D000391 4.6e-12 74.3 68 52.9
MBI19_g20795_MAGBIO Magnolia biondii HOM05D000382 ORTHO05D000391 6.0e-12 73.9 71 52.1
EL10Ac3g07239 Beta vulgaris HOM05D000382 ORTHO05D000391 1.8e-11 72.4 77 48.1
Cc06_g19350 Coffea canephora HOM05D000382 ORTHO05D000391 1.8e-11 72.4 68 50.0
FAN02G1376 Fragaria x ananassa HOM05D000382 ORTHO05D000391 2.3e-11 72.0 35 100.0
FAN05G0288 Fragaria x ananassa HOM05D000382 ORTHO05D000391 2.3e-11 72.0 35 100.0
Potri.006G039000 Populus trichocarpa HOM05D000382 ORTHO05D000391 3.0e-11 71.6 56 58.9
TAR369G0074 Trochodendron aralioides HOM05D000382 ORTHO05D000391 3.0e-11 71.6 68 54.4
CSS0027268 Camellia sinensis var. sinensis HOM05D000382 ORTHO05D000391 8.7e-11 70.1 68 50.0
AUR62018350 Chenopodium quinoa HOM05D000382 ORTHO05D000391 1.1e-10 69.7 77 46.8
Lalb_Chr22g0357441 Lupinus albus HOM05D000382 ORTHO05D000391 1.1e-10 69.7 78 42.3
GSVIVG01036649001 Vitis vinifera HOM05D000382 ORTHO05D000391 1.1e-10 69.7 68 50.0
Glyma.19G130200 Glycine max HOM05D000382 ORTHO05D000391 1.9e-10 68.9 76 39.5
Phvul.001G123300 Phaseolus vulgaris HOM05D000382 ORTHO05D000391 2.5e-10 68.6 66 45.5
VMungo1383G0310 Vigna mungo HOM05D000382 ORTHO05D000391 2.5e-10 68.6 66 45.5
AUR62030316 Chenopodium quinoa HOM05D000382 ORTHO05D000391 4.3e-10 67.8 77 45.5
Lalb_Chr14g0365831 Lupinus albus HOM05D000382 ORTHO05D000391 5.6e-10 67.4 71 45.1
Lalb_Chr21g0316711 Lupinus albus HOM05D000382 ORTHO05D000391 1.3e-09 66.2 79 39.2
Dinv44701 Davidia involucrata HOM05D000382 ORTHO05D000391 1.6e-09 65.9 72 44.4
Lj1A1091G20 Lonicera japonica HOM05D000382 ORTHO05D000391 1.6e-09 65.9 66 48.5
Gohir.A11G307000 Gossypium hirsutum HOM05D000382 ORTHO05D000391 2.8e-09 65.1 70 48.6
Ca_08390_v3 Cicer arietinum L. HOM05D000382 ORTHO05D000391 3.7e-09 64.7 70 48.6
Psat3g079000 Pisum sativum HOM05D000382 ORTHO05D000391 6.2e-09 63.9 68 47.1
Glyma.03G127600 Glycine max HOM05D000382 ORTHO05D000391 8.1e-09 63.5 77 39.0
Gohir.D11G322500 Gossypium hirsutum HOM05D000382 ORTHO05D000391 8.1e-09 63.5 70 48.6
Gorai.007G352600 Gossypium raimondii HOM05D000382 ORTHO05D000391 8.1e-09 63.5 70 48.6
Nitab4.5_0012788g0010 Nicotiana tabacum HOM05D000382 ORTHO05D000391 8.1e-09 63.5 64 48.4
Sed0009151 Sechium edule HOM05D000382 ORTHO05D000391 8.1e-09 63.5 71 56.3
Haze_03006 Corylus avellana HOM05D000382 ORTHO05D000391 1.4e-08 62.8 65 47.7
TPR.G34625 Trifolium pratense HOM05D000382 ORTHO05D000391 1.4e-08 62.8 68 48.5
Actinidia38164 Actinidia chinensis HOM05D000382 ORTHO05D000391 2.4e-08 62.0 71 43.7
Sabra06G0026300 Salix brachista HOM05D000382 ORTHO05D000391 2.4e-08 62.0 51 52.9
SalBow6G3102 Salvia bowleyana HOM05D000382 ORTHO05D000391 2.4e-08 62.0 71 46.5
Lalb_Chr06g0173681 Lupinus albus HOM05D000382 ORTHO05D000391 3.1e-08 61.6 70 41.4
Aqoxy2G00400 Aquilegia oxysepala HOM05D000382 ORTHO05D000391 4.0e-08 61.2 65 47.7
Peaxi162Scf00696g00314 Petunia axillaris HOM05D000382 ORTHO05D000391 4.0e-08 61.2 70 45.7
Cfa010942 Carpinus fangiana HOM05D000382 ORTHO05D000391 1.2e-07 59.7 65 46.2
Nitab4.5_0005162g0010 Nicotiana tabacum HOM05D000382 ORTHO05D000391 1.5e-07 59.3 64 45.3
Medtr7g089800 Medicago truncatula HOM05D000382 ORTHO05D000391 2.0e-07 58.9 68 48.5
Lj1g0000157 Lotus japonicus HOM05D000382 ORTHO05D000391 3.4e-07 58.2 73 42.5
TWI34G0183 Tripterygium wilfordii HOM05D000382 ORTHO05D000391 5.8e-07 57.4 111 35.1
arahy.Tifrunner.gnm1.ann1.KZ9VWQ Arachis hypogaea HOM05D000382 ORTHO05D000391 7.6e-07 57.0 76 42.1
arahy.Tifrunner.gnm1.ann1.PHPT4F Arachis hypogaea HOM05D000382 ORTHO05D000391 7.6e-07 57.0 76 42.1
Migut.J01654 Erythranthe guttata HOM05D000382 ORTHO05D000391 2.2e-06 55.5 68 42.6
Eucgr.K01643 Eucalyptus grandis HOM05D000382 ORTHO05D000391 2.9e-06 55.1 49 49.0
Rhsim04G0111500 Rhododendron simsii HOM05D000382 ORTHO05D000391 2.9e-06 55.1 48 56.2
CAN.G128.71 Capsicum annuum HOM05D000382 ORTHO05D000391 3.8e-06 54.7 51 51.0
QL04p018691 Quercus lobata HOM05D000382 ORTHO05D000391 3.8e-06 54.7 65 44.6
Sopen10g031310 Solanum pennellii HOM05D000382 ORTHO05D000391 6.4e-06 53.9 52 51.9
CiPaw.13G015200 Carya illinoinensis HOM05D000382 ORTHO05D000391 8.4e-06 53.5 46 54.3
COL.COLO4_20698 Corchorus olitorius HOM05D000382 ORTHO05D000391 8.4e-06 53.5 49 49.0


User provided reference genes

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