Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 1.4e-142 509.6 251 100.0
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 1.3e-95 353.6 239 75.3
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 1.2e-90 337.0 239 72.4
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.9e-89 332.0 239 71.1
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.9e-89 332.0 239 71.1
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 5.1e-89 331.6 239 71.5
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 1.1e-88 330.5 238 71.8
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.5e-88 329.3 239 71.1
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 1.6e-87 326.6 233 69.5
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 1.6e-87 326.6 240 69.2
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 2.8e-87 325.9 235 68.5
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 1.8e-86 323.2 260 65.8
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 3.1e-86 322.4 241 69.3
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 5.3e-86 321.6 207 75.4
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 1.2e-85 320.5 228 70.2
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 1.2e-85 320.5 236 68.2
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 2.0e-85 319.7 206 74.8
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 3.4e-85 318.9 233 69.1
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 4.5e-85 318.5 236 66.9
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 4.5e-85 318.5 236 66.9
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 1.3e-84 317.0 239 68.2
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 1.7e-84 316.6 214 72.0
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 6.4e-84 314.7 206 74.3
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 1.1e-83 313.9 239 66.1
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 4.2e-83 312.0 239 66.1
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 5.4e-83 311.6 212 74.1
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 7.1e-83 311.2 238 67.2
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 9.3e-83 310.8 241 67.6
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 9.3e-83 310.8 209 72.2
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 1.2e-82 310.5 210 71.0
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 1.2e-82 310.5 233 68.7
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 1.2e-82 310.5 244 67.2
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 2.1e-82 309.7 233 68.7
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 2.1e-82 309.7 247 66.0
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 3.5e-82 308.9 235 66.4
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 3.5e-82 308.9 239 66.5
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 4.6e-82 308.5 199 77.4
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 7.9e-82 307.8 234 67.9
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 7.9e-82 307.8 234 68.4
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 7.9e-82 307.8 234 68.4
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 1.0e-81 307.4 247 65.2
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 1.8e-81 306.6 203 73.4
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 3.9e-81 305.4 199 74.4
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 3.9e-81 305.4 240 65.4
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 6.7e-81 304.7 237 66.2
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 1.1e-80 303.9 237 65.0
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 1.1e-80 303.9 201 72.6
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 1.1e-80 303.9 194 76.3
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 1.9e-80 303.1 239 66.5
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 1.9e-80 303.1 213 70.4
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 2.5e-80 302.8 235 63.8
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 7.4e-80 301.2 206 72.3
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 9.6e-80 300.8 237 64.6
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 9.6e-80 300.8 229 69.0
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 1.3e-79 300.4 250 64.0
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 1.3e-79 300.4 250 64.8
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 1.6e-79 300.1 245 63.3
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 2.1e-79 299.7 239 64.9
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 4.8e-79 298.5 227 67.8
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 6.2e-79 298.1 205 72.2
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 2.4e-78 296.2 244 65.2
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 6.9e-78 294.7 178 78.1
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 1.2e-77 293.9 248 64.5
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 1.2e-77 293.9 204 69.1
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 5.8e-77 291.6 209 70.3
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 5.8e-77 291.6 241 63.1
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 1.0e-76 290.8 204 69.6
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 1.0e-76 290.8 225 68.0
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 2.2e-76 289.7 244 63.1
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 6.5e-76 288.1 240 63.8
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 8.4e-76 287.7 241 63.9
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 8.4e-76 287.7 204 69.1
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 2.5e-75 286.2 200 69.0
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 1.3e-73 280.4 266 56.8
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 3.9e-73 278.9 208 68.3
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 4.3e-72 275.4 206 67.5
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.3e-71 273.9 279 55.6
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 1.6e-71 273.5 206 67.5
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 2.1e-71 273.1 261 57.5
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 4.5e-69 265.4 238 59.2
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 5.0e-68 261.9 198 69.2
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 7.2e-67 258.1 212 63.2
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 2.1e-66 256.5 159 76.1
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 7.9e-66 254.6 235 58.3
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 3.0e-65 252.7 175 72.0
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 1.9e-64 250.0 175 72.6
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 2.5e-64 249.6 159 76.1
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 2.2e-63 246.5 179 69.3
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 5.3e-62 241.9 159 74.2
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 1.7e-60 236.9 164 73.8
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 1.2e-58 230.7 170 70.0
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 3.6e-58 229.2 126 82.5
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 3.9e-57 225.7 240 54.2
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 5.1e-57 225.3 145 74.5
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 3.8e-52 209.1 195 57.9
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 5.2e-41 172.2 127 67.7
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 6.7e-41 171.8 132 65.2
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 8.8e-41 171.4 105 78.1
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 1.8e-33 147.1 123 64.2
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 3.6e-26 122.9 70 80.0
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 6.8e-25 118.6 126 52.4
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 1.8e-22 110.5 77 71.4
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 2.0e-21 107.1 93 58.1
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 1.1e-19 101.3 55 85.5
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 3.4e-16 89.7 81 60.5
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 2.2e-15 87.0 62 67.7
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 2.5e-11 73.6 72 55.6
HPP92_024261 Vanilla planifolia HOM05D007255 ORTHO05D431742 4.9e-07 59.3 86 37.2


User provided reference genes

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