Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 4.3e-169 598.2 370 100.0
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 9.2e-87 324.7 289 61.9
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.2e-86 324.3 264 68.6
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.7e-86 323.2 290 63.1
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 1.7e-85 320.5 371 56.3
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 5.0e-85 318.9 289 61.6
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 2.5e-84 316.6 283 61.5
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 4.4e-81 305.8 288 58.3
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 7.5e-81 305.1 292 58.9
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.3e-80 304.3 288 58.7
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.2e-80 303.5 286 57.3
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.9e-79 300.4 276 58.3
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 1.2e-78 297.7 299 56.2
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 1.6e-78 297.4 289 56.1
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 6.0e-78 295.4 286 58.0
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 7.8e-78 295.0 366 47.0
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.0e-77 294.7 291 58.1
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 1.7e-77 293.9 273 58.6
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 2.3e-77 293.5 285 55.8
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 1.6e-75 287.3 298 54.0
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.1e-75 287.0 276 58.0
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 2.1e-75 287.0 384 53.9
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.1e-75 287.0 294 54.1
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 3.6e-75 286.2 270 56.7
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 4.7e-75 285.8 288 55.2
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 1.1e-74 284.6 288 55.6
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.4e-74 284.3 290 58.6
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 3.1e-74 283.1 290 54.8
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.0e-73 280.4 286 55.9
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 2.6e-73 280.0 379 51.5
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 3.4e-73 279.6 288 57.6
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.9e-72 276.6 283 55.8
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 2.9e-72 276.6 296 53.7
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 6.4e-72 275.4 289 56.4
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 8.3e-72 275.0 286 55.2
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.1e-71 274.6 312 52.9
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.1e-71 274.6 283 55.5
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 3.2e-71 273.1 273 55.7
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 3.2e-71 273.1 289 53.6
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 4.1e-71 272.7 277 54.9
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 5.4e-71 272.3 273 55.3
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 9.2e-71 271.6 300 53.3
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.2e-70 271.2 280 53.2
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 2.1e-70 270.4 287 54.4
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 2.1e-70 270.4 283 52.3
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 4.6e-70 269.2 281 54.8
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 1.0e-69 268.1 282 55.7
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.7e-69 267.3 285 50.9
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 3.9e-69 266.2 292 53.1
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 3.9e-69 266.2 287 54.7
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 3.9e-69 266.2 284 54.2
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 6.6e-69 265.4 289 54.3
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.1e-68 264.6 277 55.6
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 1.1e-68 264.6 291 51.9
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.9e-68 263.8 312 51.9
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 2.5e-68 263.5 293 53.6
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 3.3e-68 263.1 283 51.9
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 5.6e-68 262.3 378 48.7
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 7.3e-68 261.9 281 52.3
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 9.5e-68 261.5 299 52.5
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 9.5e-68 261.5 301 51.2
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 1.2e-67 261.2 285 52.3
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 2.1e-67 260.4 275 54.2
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 2.1e-67 260.4 287 53.3
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 3.6e-67 259.6 274 55.1
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 3.1e-66 256.5 294 53.1
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 3.1e-66 256.5 267 52.8
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.0e-66 256.1 270 55.2
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 4.0e-66 256.1 262 53.1
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 5.2e-66 255.8 276 54.0
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 6.8e-66 255.4 259 55.6
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.2e-65 254.6 270 55.9
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 2.0e-65 253.8 262 53.1
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 2.6e-65 253.4 275 52.4
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.3e-64 251.1 273 53.5
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 2.9e-64 250.0 267 55.1
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 2.9e-64 250.0 275 52.0
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 9.2e-63 245.0 292 50.7
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 3.5e-62 243.0 293 50.5
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 7.8e-62 241.9 278 51.4
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 3.0e-61 240.0 495 36.4
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 1.5e-60 237.7 250 52.0
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.9e-60 237.3 285 50.9
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 7.3e-60 235.3 277 53.8
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.2e-59 234.6 276 51.8
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.6e-59 234.2 222 57.2
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 1.1e-58 231.5 278 49.3
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 1.4e-58 231.1 282 48.2
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 1.4e-58 231.1 272 48.5
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 3.1e-58 229.9 219 58.4
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 5.2e-58 229.2 330 41.5
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 1.5e-57 227.6 287 48.8
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 6.4e-56 222.2 272 48.5
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 1.3e-53 214.5 284 47.2
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 5.6e-52 209.1 282 45.7
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 2.8e-51 206.8 239 53.1
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.4e-49 199.9 227 49.3
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 9.9e-49 198.4 203 53.7
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 9.9e-49 198.4 346 41.0
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.7e-48 197.6 285 43.9
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 2.9e-48 196.8 289 41.5
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.4e-47 194.5 274 42.0
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 4.2e-47 193.0 279 43.0
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 2.1e-46 190.7 155 65.2
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 2.7e-46 190.3 336 37.2
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 2.3e-45 187.2 170 57.1
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 9.0e-42 175.3 224 44.2
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 1.5e-41 174.5 256 42.6
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 5.5e-39 166.0 304 46.4
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 9.6e-36 155.2 248 38.3
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 6.9e-34 149.1 259 37.5
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 1.3e-32 144.8 289 36.7
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 3.3e-28 130.2 286 35.7
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 4.1e-26 123.2 182 42.3
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 5.5e-23 112.8 94 61.7
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 3.5e-22 110.2 83 67.5
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 5.7e-20 102.8 189 37.0
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 4.5e-17 93.2 265 29.1
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 8.5e-16 89.0 103 51.5
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 2.5e-12 77.4 207 35.7
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 2.8e-11 73.9 212 33.0
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 5.3e-10 69.7 206 28.6
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 9.1e-10 68.9 206 30.1


User provided reference genes

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