Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 1.0e-60 236.5 114 100.0
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 1.1e-25 120.2 76 68.4
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 5.8e-24 114.4 72 68.1
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.3e-23 113.2 74 66.2
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.3e-23 113.2 74 66.2
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 4.2e-22 108.2 76 63.2
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 5.4e-22 107.8 72 66.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 1.2e-21 106.7 73 63.0
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.6e-21 106.3 73 63.0
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 2.1e-21 105.9 73 63.0
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.7e-21 105.5 74 60.8
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 2.7e-21 105.5 73 60.3
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 4.6e-21 104.8 72 62.5
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 4.6e-21 104.8 73 60.3
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 4.6e-21 104.8 72 61.1
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.0e-20 103.6 73 63.0
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.0e-20 103.6 72 62.5
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 1.0e-20 103.6 73 60.3
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 1.0e-20 103.6 73 60.3
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.3e-20 103.2 75 60.0
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.7e-20 102.8 88 55.7
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.7e-20 102.8 72 62.5
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 2.3e-20 102.4 72 61.1
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 2.3e-20 102.4 70 62.9
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.1e-20 101.3 72 59.7
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 5.1e-20 101.3 72 61.1
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 6.6e-20 100.9 78 61.5
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 8.7e-20 100.5 72 62.5
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 2.5e-19 99.0 78 55.1
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 2.5e-19 99.0 72 59.7
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 2.5e-19 99.0 72 58.3
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 3.3e-19 98.6 72 58.3
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 3.3e-19 98.6 75 56.0
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 3.3e-19 98.6 72 59.7
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 3.3e-19 98.6 72 58.3
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 4.3e-19 98.2 74 56.8
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 5.6e-19 97.8 72 59.7
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 5.6e-19 97.8 72 56.9
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.3e-18 96.7 72 54.2
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 2.1e-18 95.9 74 58.1
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 2.8e-18 95.5 98 44.9
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 2.8e-18 95.5 75 53.3
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 2.8e-18 95.5 73 57.5
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 4.8e-18 94.7 73 52.1
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 4.8e-18 94.7 72 56.9
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.1e-17 93.6 74 54.1
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.4e-17 93.2 72 58.3
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.8e-17 92.8 72 55.6
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.8e-17 92.8 74 55.4
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 2.4e-17 92.4 74 54.1
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 2.4e-17 92.4 74 54.1
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 2.4e-17 92.4 72 55.6
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 2.4e-17 92.4 73 54.8
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 2.4e-17 92.4 72 55.6
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 3.1e-17 92.0 74 52.7
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 3.1e-17 92.0 74 52.7
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 3.1e-17 92.0 73 49.3
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 4.0e-17 91.7 73 54.8
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 4.0e-17 91.7 73 56.2
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 9.0e-17 90.5 74 51.4
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 1.5e-16 89.7 74 51.4
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 2.0e-16 89.4 80 51.2
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 2.0e-16 89.4 74 50.0
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-16 89.4 73 47.9
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-16 89.4 73 47.9
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-16 89.4 73 47.9
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-16 89.4 73 47.9
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 4.5e-16 88.2 71 54.9
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 7.6e-16 87.4 73 46.6
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 7.6e-16 87.4 55 63.6
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 7.6e-16 87.4 86 43.0
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 7.6e-16 87.4 72 48.6
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 3.8e-15 85.1 72 51.4
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 1.9e-14 82.8 72 50.0
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 2.4e-14 82.4 56 58.9
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 3.2e-14 82.0 77 45.5
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 4.2e-14 81.6 56 55.4
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 1.6e-13 79.7 56 53.6
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 2.1e-13 79.3 56 55.4
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 1.1e-11 73.6 78 41.0
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 3.3e-11 72.0 54 57.4
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 4.3e-11 71.6 69 43.5
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 4.3e-11 71.6 55 50.9
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 5.6e-11 71.2 59 45.8
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 7.4e-11 70.9 59 45.8
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 7.4e-11 70.9 59 45.8
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 9.6e-11 70.5 55 50.9
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 1.3e-10 70.1 73 43.8
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 2.1e-10 69.3 59 45.8
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 6.2e-10 67.8 44 63.6
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 3.1e-09 65.5 57 43.9
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 4.0e-09 65.1 72 38.9
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 6.9e-09 64.3 67 43.3
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 1.2e-08 63.5 47 53.2
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 2.6e-08 62.4 72 40.3
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 9.9e-08 60.5 72 38.9
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 2.9e-07 58.9 60 46.7


User provided reference genes

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