Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 2.8e-118 428.7 227 100.0
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 1.8e-56 223.4 211 56.9
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 1.1e-55 220.7 214 57.9
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 9.7e-55 217.6 218 55.5
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 8.2e-54 214.5 223 53.8
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 8.2e-54 214.5 220 56.4
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 1.8e-53 213.4 221 55.7
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 5.3e-53 211.8 217 55.3
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.2e-52 210.7 218 53.2
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 2.0e-52 209.9 221 53.8
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 2.6e-52 209.5 220 54.5
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 3.4e-52 209.1 223 55.2
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 5.9e-52 208.4 225 54.2
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 1.0e-51 207.6 212 53.8
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 2.2e-51 206.5 213 57.3
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 2.2e-51 206.5 211 54.5
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 2.9e-51 206.1 221 54.8
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 2.9e-51 206.1 217 55.3
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 3.8e-51 205.7 212 54.7
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 8.5e-51 204.5 166 66.9
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 1.4e-50 203.8 218 53.2
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 1.9e-50 203.4 212 54.2
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 2.5e-50 203.0 213 50.7
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 2.5e-50 203.0 216 54.6
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 3.2e-50 202.6 214 52.3
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 4.2e-50 202.2 213 53.5
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 5.5e-50 201.8 227 53.3
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 9.4e-50 201.1 212 52.8
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 9.4e-50 201.1 212 52.8
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 9.4e-50 201.1 225 52.9
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 1.2e-49 200.7 212 53.3
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 2.1e-49 199.9 219 53.4
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 2.1e-49 199.9 219 52.5
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 4.7e-49 198.7 210 53.8
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 6.1e-49 198.4 221 52.0
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 1.0e-48 197.6 222 53.2
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 1.4e-48 197.2 217 53.0
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 2.3e-48 196.4 203 55.2
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 3.0e-48 196.1 213 54.0
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 3.9e-48 195.7 215 51.6
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 5.1e-48 195.3 212 54.7
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 6.7e-48 194.9 217 53.5
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 6.7e-48 194.9 227 50.7
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 6.7e-48 194.9 212 51.9
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 6.7e-48 194.9 225 52.4
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 8.8e-48 194.5 212 51.4
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 1.1e-47 194.1 213 51.6
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 2.0e-47 193.4 211 52.6
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 3.3e-47 192.6 216 51.9
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 4.4e-47 192.2 219 48.4
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 4.4e-47 192.2 214 52.3
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 5.7e-47 191.8 211 53.6
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 1.3e-46 190.7 212 53.3
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.3e-46 190.7 212 54.2
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 2.2e-46 189.9 212 49.5
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 4.8e-46 188.7 213 53.5
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 1.4e-45 187.2 219 50.7
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 1.8e-45 186.8 221 48.9
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 3.1e-45 186.0 177 57.6
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 4.1e-45 185.7 203 53.7
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 1.5e-44 183.7 206 51.0
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 2.0e-44 183.3 212 50.9
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 3.5e-44 182.6 214 51.9
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 4.5e-44 182.2 201 53.2
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 4.5e-44 182.2 221 48.0
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 5.9e-44 181.8 153 62.1
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 1.3e-43 180.6 206 50.0
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 1.7e-43 180.3 204 52.5
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 2.9e-43 179.5 156 63.5
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 6.1e-41 171.8 306 39.2
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 8.0e-41 171.4 205 46.8
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 1.0e-40 171.0 218 48.6
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 1.0e-40 171.0 226 45.6
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 3.3e-39 166.0 213 46.0
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 3.7e-38 162.5 219 47.0
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 4.1e-37 159.1 205 48.8
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 2.0e-36 156.8 210 42.4
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 2.6e-36 156.4 252 42.5
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 5.9e-36 155.2 158 52.5
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 7.7e-36 154.8 214 46.7
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 1.1e-34 151.0 210 39.5
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 2.5e-34 149.8 215 39.5
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 1.5e-31 140.6 111 64.9
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 2.0e-31 140.2 211 38.4
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 4.4e-31 139.0 212 38.2
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 5.7e-31 138.7 224 37.5
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 9.1e-29 131.3 208 35.6
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 2.7e-28 129.8 203 43.8
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 3.5e-28 129.4 206 38.3
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 6.5e-27 125.2 217 37.8
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 1.9e-26 123.6 162 40.7
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 1.9e-26 123.6 162 40.7
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 2.5e-26 123.2 151 49.0
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 7.2e-26 121.7 89 74.2
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 7.5e-23 111.7 157 45.9
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 2.8e-17 93.2 195 38.5
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 6.1e-17 92.0 195 33.8
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 3.0e-16 89.7 129 45.0
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 1.3e-14 84.3 210 34.8
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 2.9e-14 83.2 123 37.4
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 4.9e-14 82.4 122 36.9
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.2e-13 79.7 124 44.4
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 4.1e-13 79.3 169 33.1
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 6.6e-11 72.0 231 32.0
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 1.7e-06 57.4 134 29.9
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 8.3e-06 55.1 51 45.1


User provided reference genes

Program Settings