Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 1.7e-47 193.0 95 100.0
Eucgr.G00441 Eucalyptus grandis HOM05D040694 ORTHO05D002252 3.0e-17 92.4 61 73.8
Eucgr.G01651 Eucalyptus grandis HOM05D040694 ORTHO05D002252 6.3e-15 84.7 73 60.3
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 4.1e-14 82.0 95 42.1
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 7.0e-14 81.3 95 42.1
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 2.3e-12 76.3 95 37.9
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 2.3e-12 76.3 105 42.9
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 5.0e-12 75.1 89 47.2
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.9e-11 73.2 98 40.8
PGR042G3705 Punica granatum HOM05D007556 ORTHO05D002252 2.5e-11 72.8 83 45.8
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 4.3e-11 72.0 102 41.2
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 7.3e-11 71.2 95 36.8
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.6e-10 70.1 109 37.6
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 2.8e-10 69.3 112 41.1
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 2.8e-10 69.3 96 41.7
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 4.7e-10 68.6 95 38.9
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 6.1e-10 68.2 98 43.9
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 6.1e-10 68.2 103 40.8
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 8.0e-10 67.8 95 38.9
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 8.0e-10 67.8 96 36.5
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 8.0e-10 67.8 97 40.2
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.0e-09 67.4 90 38.9
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 1.4e-09 67.0 72 47.2
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.4e-09 67.0 90 40.0
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.4e-09 67.0 95 37.9
CiPaw.06G136400 Carya illinoinensis HOM05D007556 ORTHO05D002252 1.8e-09 66.6 98 40.8
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 2.3e-09 66.2 86 34.9
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 4.0e-09 65.5 91 39.6
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 5.2e-09 65.1 87 41.4
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 5.2e-09 65.1 90 38.9
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.8e-09 64.7 87 39.1
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 1.2e-08 63.9 98 37.8
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 1.2e-08 63.9 88 44.3
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 1.2e-08 63.9 98 37.8
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.5e-08 63.5 90 38.9
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 2.0e-08 63.2 86 43.0
AUR62016715 Chenopodium quinoa HOM05D013587 ORTHO05D002252 2.6e-08 62.8 92 31.5
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 2.6e-08 62.8 96 36.5
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.4e-08 62.4 112 37.5
Glyma.11G119000 Glycine max HOM05D010359 ORTHO05D002252 3.4e-08 62.4 86 38.4
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 3.4e-08 62.4 88 40.9
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 4.4e-08 62.0 90 41.1
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 4.4e-08 62.0 84 41.7
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 7.5e-08 61.2 90 37.8
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.5e-08 61.2 80 41.2
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 9.8e-08 60.8 95 34.7
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 9.8e-08 60.8 114 34.2
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.3e-07 60.5 93 36.6
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.3e-07 60.5 95 35.8
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.7e-07 60.1 108 38.0
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 1.7e-07 60.1 91 37.4
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 2.2e-07 59.7 105 34.3
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-07 59.7 98 34.7
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 2.2e-07 59.7 96 36.5
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 2.9e-07 59.3 96 35.4
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 2.9e-07 59.3 96 34.4
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 2.9e-07 59.3 95 36.8
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 2.9e-07 59.3 88 39.8
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.9e-07 59.3 95 35.8
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-07 59.3 81 42.0
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 3.7e-07 58.9 90 36.7
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.7e-07 58.9 91 36.3
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.7e-07 58.9 95 35.8
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 3.7e-07 58.9 89 36.0
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 4.9e-07 58.5 86 40.7
Cc02_g17690 Coffea canephora HOM05D007556 ORTHO05D002252 4.9e-07 58.5 103 33.0
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 4.9e-07 58.5 101 38.6
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 4.9e-07 58.5 83 38.6
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 4.9e-07 58.5 89 43.8
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 6.4e-07 58.2 96 36.5
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 6.4e-07 58.2 96 33.3
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 6.4e-07 58.2 105 37.1
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 8.3e-07 57.8 96 34.4
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 8.3e-07 57.8 96 38.5
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 8.3e-07 57.8 87 39.1
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.1e-06 57.4 99 41.4
TPR.G24483 Trifolium pratense HOM05D010359 ORTHO05D002252 1.1e-06 57.4 83 36.1
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 1.4e-06 57.0 88 38.6
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 1.9e-06 56.6 96 36.5
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 1.9e-06 56.6 90 41.1
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 1.9e-06 56.6 86 38.4
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.4e-06 56.2 116 34.5
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 2.4e-06 56.2 90 31.1
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.4e-06 56.2 95 34.7
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 3.2e-06 55.8 90 36.7
Medtr4g069810 Medicago truncatula HOM05D010359 ORTHO05D002252 3.2e-06 55.8 91 36.3
Psat5g006560 Pisum sativum HOM05D010359 ORTHO05D002252 3.2e-06 55.8 96 35.4
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 4.1e-06 55.5 96 33.3
HanXRQChr16g0524731 Helianthus annuus HOM05D017364 ORTHO05D002252 4.1e-06 55.5 89 33.7
Rhsim11G0174800 Rhododendron simsii HOM05D007227 ORTHO05D002252 4.1e-06 55.5 81 42.0
PGSC0003DMG400009559 Solanum tuberosum HOM05D007556 ORTHO05D002252 4.1e-06 55.5 75 38.7
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 5.4e-06 55.1 90 34.4
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.4e-06 55.1 91 36.3
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 5.4e-06 55.1 88 39.8
AUR62016714 Chenopodium quinoa HOM05D013587 ORTHO05D002252 7.0e-06 54.7 92 31.5
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 7.0e-06 54.7 88 39.8
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 9.2e-06 54.3 79 36.7
CANSAT56G0346 Cannabis sativa HOM05D007556 ORTHO05D002252 9.2e-06 54.3 91 37.4
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 9.2e-06 54.3 76 40.8
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 9.2e-06 54.3 95 33.7


User provided reference genes

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