Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 9.5e-286 986.1 481 100.0
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 2.5e-209 732.3 451 78.9
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.6e-208 729.6 487 74.7
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.0e-207 726.9 480 74.2
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 1.3e-205 719.9 480 73.1
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 3.7e-205 718.4 482 73.4
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 1.1e-204 716.8 470 74.0
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 2.4e-204 715.7 481 73.4
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.6e-203 713.0 481 71.9
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.0e-203 712.6 482 72.4
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 4.5e-203 711.4 479 72.9
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 4.5e-203 711.4 482 72.4
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 6.5e-202 707.6 502 70.7
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 1.1e-201 706.8 479 72.9
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.9e-201 706.1 479 72.4
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 3.2e-201 705.3 487 71.7
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 4.2e-201 704.9 474 73.6
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 9.4e-201 703.7 483 71.8
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 6.1e-200 701.0 481 71.3
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 1.0e-199 700.3 481 70.7
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.4e-199 699.9 481 71.1
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 2.3e-199 699.1 481 71.1
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.3e-197 693.3 488 69.9
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.6e-195 686.4 474 71.1
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 1.7e-194 682.9 479 70.4
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 1.1e-193 680.2 488 68.9
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.1e-193 680.2 483 70.0
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 1.5e-193 679.9 432 75.9
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 1.9e-193 679.5 480 71.7
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 2.1e-192 676.0 476 70.4
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 3.0e-191 672.2 430 74.4
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 4.4e-190 668.3 470 69.6
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.4e-188 663.3 466 69.3
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 2.4e-188 662.5 476 68.3
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 5.4e-188 661.4 441 72.8
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 5.9e-187 657.9 430 72.1
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 5.9e-187 657.9 430 73.3
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 7.8e-187 657.5 485 66.6
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 2.3e-186 656.0 478 69.5
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 3.9e-186 655.2 432 71.5
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 2.5e-185 652.5 476 67.4
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 2.5e-185 652.5 432 71.3
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 6.1e-184 647.9 469 66.7
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.8e-183 646.4 432 70.6
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 2.3e-183 646.0 432 70.4
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 3.1e-183 645.6 443 70.9
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 3.1e-183 645.6 443 71.1
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 8.9e-183 644.0 475 67.8
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.5e-182 643.3 467 66.8
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 2.0e-182 642.9 442 69.5
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 3.4e-182 642.1 481 67.4
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 3.4e-182 642.1 431 71.9
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 3.4e-182 642.1 436 71.3
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 3.4e-182 642.1 368 81.2
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 4.4e-182 641.7 390 77.2
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 7.5e-182 641.0 443 70.0
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 9.8e-182 640.6 384 77.1
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 2.2e-181 639.4 393 76.1
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 2.9e-181 639.0 483 66.7
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 1.1e-180 637.1 471 67.7
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 1.4e-180 636.7 430 69.8
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.4e-180 636.7 430 70.2
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.4e-180 636.7 442 68.8
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 2.4e-180 636.0 454 68.7
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 2.4e-180 636.0 471 67.9
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 2.4e-180 636.0 471 67.9
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 3.2e-180 635.6 435 70.6
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 4.1e-180 635.2 483 65.8
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 4.1e-180 635.2 433 70.0
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 4.1e-180 635.2 384 76.8
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 5.4e-180 634.8 471 67.7
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 5.4e-180 634.8 439 69.9
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 7.0e-180 634.4 486 64.4
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.3e-178 630.2 432 69.4
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.5e-177 626.7 387 74.2
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 1.2e-176 623.6 364 78.6
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.2e-176 623.6 385 75.8
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 2.1e-176 622.9 396 74.0
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 4.0e-175 618.6 446 68.6
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 8.9e-175 617.5 466 66.3
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 1.2e-174 617.1 502 63.3
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 4.1e-172 608.6 506 62.3
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 3.6e-168 595.5 478 61.7
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 9.9e-166 587.4 496 62.7
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 9.2e-164 580.9 447 65.8
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 2.1e-163 579.7 407 70.8
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 3.5e-163 578.9 478 60.5
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.6e-160 570.1 463 60.9
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 3.6e-160 568.9 423 65.5
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 2.2e-157 559.7 436 61.5
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 6.2e-152 541.6 444 59.0
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.8e-151 540.0 334 75.7
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 3.8e-149 532.3 474 58.0
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 8.4e-141 504.6 371 63.3
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 4.8e-136 488.8 432 57.2
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.1e-127 461.1 443 54.6
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.5e-110 402.5 331 62.8
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 7.4e-105 385.2 212 84.9
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 2.2e-96 357.1 259 70.3
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.4e-95 354.4 383 45.2
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 5.3e-95 352.4 455 41.3
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.9e-92 344.0 281 63.3
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 2.5e-92 343.6 488 41.2
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 4.0e-90 336.3 223 73.1
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 3.5e-78 296.6 320 51.2
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 4.2e-76 289.7 164 86.6
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 4.4e-65 253.1 159 73.6
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 1.1e-63 248.4 267 52.1
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 3.9e-45 186.8 280 45.0
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 2.4e-39 167.5 128 61.7
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 9.3e-31 139.0 123 56.1
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 8.1e-27 125.9 142 55.6
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.5e-25 120.2 67 80.6
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 3.8e-24 117.1 76 68.4
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 6.4e-24 116.3 81 70.4
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 2.8e-19 100.9 92 54.3
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.8e-18 98.2 102 51.0
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 2.4e-18 97.8 133 46.6
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 2.1e-14 84.7 116 46.6


User provided reference genes

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