Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 0.0e+00 1723.8 976 100.0
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 8.0e-311 1070.5 1002 67.6
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 7.8e-303 1043.9 989 65.9
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 2.3e-302 1042.3 985 67.2
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 3.9e-302 1041.6 988 66.6
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.3e-301 1038.5 1039 63.4
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 6.2e-300 1034.2 985 66.2
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 2.4e-296 1022.3 986 65.0
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 3.9e-294 1015.0 1010 63.9
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 3.3e-293 1011.9 1056 62.3
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 2.1e-292 1009.2 977 66.3
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 2.4e-291 1005.7 987 65.6
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.1e-291 1005.4 1005 64.2
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.2e-290 1003.4 1002 64.5
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 5.8e-290 1001.1 983 64.6
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.1e-288 996.9 989 64.9
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.9e-288 996.1 1004 63.2
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 9.3e-288 993.8 992 64.6
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 1.2e-287 993.4 1002 63.8
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.3e-286 989.9 1000 64.1
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.5e-285 986.5 1066 61.2
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 2.1e-284 982.6 999 62.4
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 3.6e-284 981.9 980 63.8
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 1.8e-283 979.5 992 62.1
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 3.1e-283 978.8 1006 63.7
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 4.0e-283 978.4 1056 60.9
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 5.3e-283 978.0 1056 61.5
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 6.9e-283 977.6 1013 62.6
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 9.0e-283 977.2 1003 62.6
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 3.4e-282 975.3 980 63.8
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 4.9e-281 971.5 1003 62.4
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 6.4e-281 971.1 987 63.2
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.1e-280 970.3 1050 60.2
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 7.1e-280 967.6 983 63.3
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.1e-279 966.1 983 63.2
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 4.6e-279 964.9 1074 60.1
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 7.9e-279 964.1 1030 61.5
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 1.3e-278 963.4 994 62.7
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 1.1e-277 960.3 1004 61.4
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.9e-277 959.5 981 63.2
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.6e-277 958.0 986 63.2
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 4.8e-276 954.9 994 61.9
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 6.2e-276 954.5 1043 59.6
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 8.1e-276 954.1 983 62.9
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 8.1e-276 954.1 1003 62.1
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.1e-275 953.7 981 63.1
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 1.4e-275 953.4 1002 61.8
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 4.0e-275 951.8 752 76.6
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.0e-275 951.8 977 63.3
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.5e-274 949.9 1029 60.8
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 2.6e-274 949.1 1005 61.5
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 3.4e-274 948.7 1170 56.2
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 7.6e-274 947.6 989 61.9
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 4.9e-273 944.9 1014 60.8
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 8.4e-273 944.1 992 61.7
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 7.1e-272 941.0 991 61.6
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 7.9e-271 937.6 1007 61.1
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 1.3e-270 936.8 1023 60.8
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 3.3e-269 932.2 984 61.9
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 9.6e-269 930.6 990 61.1
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.1e-268 929.5 1018 59.6
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 1.1e-267 927.2 1034 60.0
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 6.9e-267 924.5 1085 57.7
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 9.0e-267 924.1 1023 59.5
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 1.5e-266 923.3 982 60.7
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 1.5e-266 923.3 1004 60.7
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 1.3e-265 920.2 986 60.6
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 1.7e-265 919.8 1045 58.9
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 3.8e-265 918.7 982 61.0
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 4.9e-265 918.3 1003 60.2
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 5.5e-264 914.8 1031 60.6
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 7.1e-264 914.4 1001 61.6
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 9.3e-264 914.1 1025 59.7
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 3.5e-263 912.1 1005 59.7
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 1.0e-262 910.6 980 61.0
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 1.3e-262 910.2 987 60.2
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 1.3e-262 910.2 1011 59.7
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 3.9e-262 908.7 998 59.9
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 5.1e-262 908.3 981 60.0
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 9.7e-261 904.0 987 60.1
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 1.3e-260 903.7 1033 59.1
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 1.1e-259 900.6 983 59.4
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 1.4e-259 900.2 1027 57.8
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 9.0e-259 897.5 997 59.4
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 1.2e-258 897.1 1038 58.3
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 7.7e-258 894.4 1036 57.8
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 5.0e-257 891.7 1153 53.0
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.4e-256 890.2 981 60.2
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 2.5e-256 889.4 1013 59.0
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.2e-256 889.0 1029 57.8
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 4.2e-256 888.6 1032 57.7
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 2.1e-255 886.3 991 59.3
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 4.6e-255 885.2 1046 57.3
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 7.9e-255 884.4 1038 57.0
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 3.9e-254 882.1 1035 57.9
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 6.7e-254 881.3 1000 58.8
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 5.7e-253 878.2 1012 57.4
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 9.7e-253 877.5 1032 57.0
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.1e-251 874.0 988 58.9
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 2.9e-249 865.9 1169 51.7
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 2.9e-249 865.9 995 59.0
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 3.9e-246 855.5 1022 56.3
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 6.7e-246 854.7 1024 56.7
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.8e-243 846.7 985 58.7
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 1.2e-242 844.0 1037 55.8
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 3.8e-241 839.0 1002 56.5
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 5.0e-241 838.6 999 56.7
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 3.0e-238 829.3 1027 55.3
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.6e-234 817.0 986 56.9
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 3.6e-231 805.8 981 56.7
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 5.7e-229 798.5 979 55.8
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 7.5e-229 798.1 1005 55.1
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 8.3e-228 794.7 985 54.7
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 4.1e-227 792.3 994 55.9
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 1.9e-224 783.5 1042 52.3
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 4.7e-223 778.9 1015 55.1
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 5.2e-214 748.8 1047 50.3
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 3.3e-200 703.0 991 51.6
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 4.9e-196 689.1 1074 47.5
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 2.9e-180 636.7 481 78.4
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-179 634.8 892 51.6
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 3.5e-178 629.8 990 46.9
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 8.4e-172 608.6 994 46.6
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.6e-165 587.0 779 53.8
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 3.9e-153 546.6 542 63.3
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.9e-145 520.0 980 42.2
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.2e-135 487.6 927 43.1
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 1.1e-115 422.2 388 66.2
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 3.1e-110 404.1 1032 36.3
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 7.8e-77 293.1 526 44.1
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 1.6e-69 268.9 449 45.9
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 9.0e-57 226.5 315 53.3
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 2.6e-56 224.9 337 49.9
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 6.2e-50 203.8 163 74.2
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 3.1e-49 201.4 195 62.1
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 5.8e-48 197.2 136 83.8
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 8.1e-42 176.8 679 30.2
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 3.4e-40 171.4 395 38.0
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 3.5e-37 161.4 684 29.8
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 7.4e-35 153.7 361 36.0
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 2.1e-34 152.1 124 70.2
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 2.1e-34 152.1 391 35.8
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 6.3e-34 150.6 508 32.1
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 2.4e-33 148.7 90 90.0
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 6.9e-33 147.1 150 62.7
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 9.3e-30 136.7 242 45.5
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 1.0e-28 133.3 88 77.3
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 1.0e-28 133.3 446 32.5
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 1.8e-28 132.5 120 61.7
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 1.9e-27 129.0 90 77.8
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 1.4e-25 122.9 673 27.3
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 1.4e-25 122.9 188 48.9
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 4.1e-25 121.3 453 31.8
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 6.9e-25 120.6 120 60.0
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 2.0e-24 119.0 354 31.6
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.6e-24 118.6 101 68.3
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 2.2e-23 115.5 641 27.5
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 6.5e-23 114.0 90 73.3
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 1.1e-22 113.2 101 66.3
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 1.1e-22 113.2 593 28.0
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.6e-21 109.4 111 60.4
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 7.9e-21 107.1 63 88.9
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 1.4e-20 106.3 83 71.1
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.3e-20 105.5 89 70.8
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 6.3e-18 97.4 72 77.8
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 1.2e-16 93.2 71 81.7
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 5.9e-16 90.9 74 74.3
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 7.7e-16 90.5 196 42.9
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 1.0e-15 90.1 75 70.7
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.2e-15 89.0 97 60.8
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 1.1e-14 86.7 60 81.7
C09p10740 Brassica napus HOM05D003521 ORTHO05D000476 1.1e-11 76.6 75 64.0
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 1.5e-11 76.3 163 41.7
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 5.7e-11 74.3 65 64.6
HanXRQChr07g0187491 Helianthus annuus HOM05D003521 ORTHO05D000476 8.2e-10 70.5 79 57.0
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 2.4e-09 68.9 101 47.5
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 4.1e-09 68.2 70 65.7
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 1.6e-08 66.2 45 77.8
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 2.0e-08 65.9 320 26.2
MBI19_g34543_MAGBIO Magnolia biondii HOM05D003521 ORTHO05D000476 2.9e-07 62.0 43 79.1
Cfa026401 Carpinus fangiana HOM05D003521 ORTHO05D000476 2.5e-06 58.9 665 24.7
EL10Ac6g13433 Beta vulgaris HOM05D000200 ORTHO05D000262 4.2e-06 58.2 49 63.3
Dinv25317 Davidia involucrata HOM05D000055 ORTHO05D000057 9.4e-06 57.0 84 47.6


User provided reference genes

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