Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.9e-183 644.0 317 100.0
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.2e-149 531.6 338 82.0
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.7e-134 483.0 310 81.0
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.6e-134 480.7 310 80.3
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.6e-133 478.0 310 80.0
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.8e-132 475.7 310 80.3
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.6e-124 448.7 297 79.5
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 2.9e-105 386.0 319 64.6
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.7e-102 376.7 314 65.6
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 3.9e-102 375.6 333 61.6
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 4.3e-101 372.1 333 61.0
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 8.1e-100 367.9 332 62.3
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 4.0e-99 365.5 324 63.0
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 8.9e-99 364.4 326 63.8
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 1.5e-98 363.6 314 63.1
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 2.0e-98 363.2 313 63.3
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 3.4e-98 362.5 312 62.5
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 2.9e-97 359.4 316 61.7
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 3.8e-97 359.0 326 61.0
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 6.4e-97 358.2 315 60.6
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 8.4e-97 357.8 327 61.5
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 1.1e-96 357.5 315 60.6
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 1.1e-96 357.5 321 62.6
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 3.2e-96 355.9 321 62.3
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 4.2e-96 355.5 321 62.0
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 9.3e-96 354.4 324 61.7
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 7.8e-95 351.3 316 59.8
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 7.8e-95 351.3 339 57.8
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 1.7e-94 350.1 322 59.6
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 3.0e-94 349.4 317 60.9
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 1.9e-93 346.7 321 61.1
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 3.3e-93 345.9 325 59.1
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 1.3e-92 344.0 312 60.9
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 1.3e-92 344.0 299 62.9
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 6.2e-92 341.7 316 61.7
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 3.1e-91 339.3 323 57.9
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 4.0e-91 339.0 324 58.3
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 6.9e-91 338.2 325 57.5
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.2e-90 337.4 329 57.1
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 1.5e-90 337.0 324 58.0
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 2.0e-90 336.7 308 60.1
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 4.5e-90 335.5 327 57.5
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 1.3e-89 334.0 286 65.0
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 3.8e-89 332.4 305 59.0
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.4e-88 330.5 317 58.7
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 1.9e-88 330.1 324 55.9
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 3.2e-88 329.3 326 54.9
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 9.3e-88 327.8 323 57.9
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 1.2e-87 327.4 311 58.2
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 4.6e-87 325.5 335 55.8
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.7e-86 321.6 243 71.2
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 3.3e-85 319.3 291 59.8
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.3e-84 317.4 302 58.9
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 1.3e-84 317.4 298 59.4
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.6e-84 315.8 299 63.2
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.4e-83 313.9 291 59.5
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 2.4e-83 313.2 322 55.9
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 3.1e-83 312.8 312 56.4
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 3.1e-83 312.8 291 58.4
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.2e-82 310.8 369 50.1
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 4.5e-82 308.9 291 58.1
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 4.5e-82 308.9 334 54.5
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 2.9e-81 306.2 313 54.3
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 3.8e-81 305.8 323 54.2
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 3.0e-78 296.2 315 54.6
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 3.3e-77 292.7 330 52.1
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.3e-77 292.7 310 56.8
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 2.1e-76 290.0 262 59.9
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 2.1e-76 290.0 319 53.6
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.2e-76 288.5 198 78.8
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.1e-76 288.1 310 56.1
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 1.4e-75 287.3 297 53.9
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 9.0e-75 284.6 285 57.9
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.0e-75 284.6 187 78.1
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.2e-74 284.3 360 48.3
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 1.5e-74 283.9 296 53.7
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 2.0e-74 283.5 295 54.9
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 3.8e-73 279.3 267 57.3
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 1.0e-70 271.2 265 58.5
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 1.8e-70 270.4 206 67.0
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.7e-70 268.1 284 57.4
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.9e-69 266.9 330 48.5
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 9.6e-69 264.6 276 54.7
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-67 261.2 177 76.3
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 4.5e-66 255.8 210 63.8
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 5.9e-66 255.4 277 54.2
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 2.5e-64 250.0 206 63.1
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 1.6e-63 247.3 287 49.1
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.1e-61 241.1 298 48.3
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.3e-60 237.7 291 50.2
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 4.8e-60 235.7 211 60.2
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 5.3e-59 232.3 325 45.5
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 3.0e-46 189.9 269 44.6
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 3.0e-46 189.9 176 59.1
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 7.7e-42 175.3 167 59.3
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 1.7e-41 174.1 170 54.1
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 6.5e-41 172.2 358 33.5
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 2.3e-38 163.7 126 66.7
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 1.5e-37 161.0 163 54.6
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.2e-34 151.4 241 39.0
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 4.0e-30 136.3 216 37.5
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 5.2e-30 136.0 256 37.1
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.5e-21 107.8 128 48.4
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 1.3e-20 104.8 101 54.5
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 1.0e-17 95.1 69 65.2
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 2.3e-17 94.0 246 29.7
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 3.8e-17 93.2 88 61.4
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 5.6e-08 62.8 88 45.5
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.8e-06 55.8 41 61.0


User provided reference genes

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