Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 2.1e-164 582.4 323 100.0
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 6.7e-102 374.8 298 73.8
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 5.7e-101 371.7 320 68.1
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 5.0e-97 358.6 313 65.8
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 1.5e-96 357.1 314 65.6
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.6e-95 353.6 313 65.5
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.0e-93 346.7 314 64.6
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 2.6e-93 346.3 316 65.5
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 3.7e-92 342.4 317 65.0
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 4.8e-92 342.0 314 64.3
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.3e-89 334.0 321 61.7
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 2.9e-89 332.8 312 61.5
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 2.9e-89 332.8 317 59.9
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.5e-88 330.5 294 66.7
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 1.9e-88 330.1 318 62.3
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.9e-88 330.1 321 61.1
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 9.5e-88 327.8 321 60.7
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 2.8e-87 326.2 311 61.4
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 3.6e-87 325.9 323 60.1
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 2.0e-85 320.1 315 58.1
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 2.6e-85 319.7 293 65.5
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.7e-85 318.5 313 61.7
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 6.3e-84 315.1 295 65.4
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 1.8e-83 313.5 318 60.4
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.3e-81 307.4 312 60.3
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 2.9e-81 306.2 317 60.9
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 6.6e-81 305.1 259 67.2
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 1.5e-80 303.9 295 62.4
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 1.9e-80 303.5 318 56.3
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 7.3e-80 301.6 310 60.0
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 2.3e-78 296.6 315 60.3
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 1.5e-77 293.9 314 55.1
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 9.8e-77 291.2 323 54.2
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 8.3e-76 288.1 296 60.8
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 1.8e-75 287.0 296 59.8
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 1.2e-74 284.3 304 58.2
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 2.7e-74 283.1 296 57.8
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 6.0e-74 282.0 317 57.1
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 6.0e-74 282.0 297 56.9
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 7.8e-74 281.6 296 58.4
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 3.0e-73 279.6 297 59.6
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 8.6e-73 278.1 301 57.1
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 1.6e-71 273.9 295 61.0
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 2.8e-71 273.1 305 55.1
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 3.6e-71 272.7 301 56.8
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 2.3e-70 270.0 295 58.6
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 6.8e-70 268.5 315 54.6
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 8.9e-70 268.1 291 60.1
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 4.4e-69 265.8 312 54.8
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 3.7e-68 262.7 305 53.1
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 2.0e-66 256.9 277 59.2
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 1.0e-65 254.6 296 54.7
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 1.9e-64 250.4 323 53.9
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 1.9e-64 250.4 323 53.9
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 3.3e-64 249.6 276 57.6
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 5.6e-64 248.8 314 54.5
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 2.8e-63 246.5 313 53.7
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 6.2e-63 245.4 313 53.0
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.4e-62 244.2 274 57.3
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 6.4e-60 235.3 314 48.7
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 1.1e-59 234.6 244 59.0
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 3.5e-58 229.6 257 58.4
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 6.0e-58 228.8 295 52.2
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 5.1e-57 225.7 268 56.0
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 8.6e-57 224.9 297 52.5
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.6e-55 220.7 256 52.0
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 2.1e-55 220.3 255 53.3
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 8.1e-55 218.4 295 47.8
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 6.8e-54 215.3 239 56.1
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.2e-53 214.5 263 54.0
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.2e-53 214.5 296 48.6
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.5e-53 214.2 324 45.4
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 2.6e-53 213.4 293 47.8
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 3.4e-53 213.0 317 44.8
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 7.6e-53 211.8 256 47.3
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 8.4e-52 208.4 325 44.9
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 1.1e-51 208.0 319 43.3
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 1.9e-51 207.2 322 44.1
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 2.4e-51 206.8 323 44.0
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 4.1e-51 206.1 325 44.6
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.6e-50 204.1 256 50.4
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 2.1e-50 203.8 322 43.5
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 3.5e-50 203.0 316 44.3
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 3.5e-50 203.0 305 47.5
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.0e-49 201.4 293 49.8
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 6.6e-49 198.7 230 54.3
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.1e-48 198.0 312 43.9
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 4.7e-47 192.6 304 44.7
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 3.1e-46 189.9 272 44.9
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 6.9e-46 188.7 283 48.1
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 1.5e-45 187.6 203 52.2
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 7.6e-45 185.3 284 44.0
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 4.6e-42 176.0 215 50.2
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 7.8e-42 175.3 254 50.4
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.9e-40 170.6 227 54.6
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 3.3e-40 169.9 236 44.5
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 3.6e-39 166.4 275 43.6
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 6.2e-39 165.6 222 49.5
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 8.4e-36 155.2 256 42.6
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 1.2e-34 151.4 185 47.0
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 3.0e-33 146.7 262 42.0
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 2.4e-30 137.1 195 41.5
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.1e-27 128.3 79 84.8
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 2.5e-24 117.1 270 34.4
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 4.6e-18 96.3 90 63.3
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 1.3e-17 94.7 299 33.4
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 2.3e-17 94.0 250 36.8
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 2.5e-16 90.5 131 42.0
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 7.4e-16 89.0 342 34.5
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 6.3e-15 85.9 156 39.7
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 8.2e-15 85.5 281 31.3
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 5.3e-14 82.8 194 43.3
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.5e-13 81.3 246 34.1
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 3.4e-13 80.1 241 31.5
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 4.5e-13 79.7 294 34.4
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.4e-11 74.7 98 55.1
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.2e-11 73.6 73 53.4
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 1.6e-10 71.2 297 30.0
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 8.8e-09 65.5 235 32.3


User provided reference genes

Program Settings