Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 1.4e-164 582.8 281 100.0
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 3.8e-101 372.1 243 77.0
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.0e-82 310.8 330 51.5
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 1.8e-79 300.1 314 50.6
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 1.5e-76 290.4 315 49.8
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 5.5e-76 288.5 326 48.5
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 2.3e-74 283.1 324 49.1
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 4.0e-74 282.3 318 47.2
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 2.6e-73 279.6 309 50.8
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 4.4e-73 278.9 323 49.2
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 1.3e-72 277.3 324 49.1
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 4.8e-72 275.4 345 43.8
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 4.8e-72 275.4 319 45.8
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 6.3e-72 275.0 327 48.0
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 5.4e-71 271.9 324 47.5
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 9.1e-71 271.2 323 47.7
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 2.0e-70 270.0 337 46.0
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 5.9e-70 268.5 332 46.7
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 1.3e-69 267.3 328 45.7
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 1.3e-69 267.3 338 44.4
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 2.3e-69 266.5 314 49.0
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 1.1e-68 264.2 321 45.8
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 1.1e-68 264.2 321 45.8
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 1.5e-68 263.8 318 45.3
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 2.5e-68 263.1 323 44.6
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 3.2e-68 262.7 332 44.3
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 4.2e-68 262.3 341 44.0
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 5.5e-68 261.9 322 44.4
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 9.5e-68 261.2 326 47.2
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 1.2e-67 260.8 331 47.1
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 1.2e-67 260.8 327 46.2
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 2.1e-67 260.0 327 46.5
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 3.6e-67 259.2 331 46.2
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 4.7e-67 258.8 321 45.5
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 1.0e-66 257.7 340 44.1
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 1.5e-65 253.8 332 45.2
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 2.0e-65 253.4 338 43.2
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 2.0e-65 253.4 338 43.2
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 3.4e-65 252.7 337 42.1
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 1.7e-64 250.4 338 42.6
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 4.9e-64 248.8 326 43.6
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 6.3e-64 248.4 334 41.9
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 1.1e-63 247.7 349 41.5
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 1.1e-63 247.7 347 40.1
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 2.4e-63 246.5 340 41.8
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 5.4e-63 245.4 343 41.7
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 3.5e-62 242.7 337 41.2
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 1.3e-61 240.7 321 43.6
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 6.6e-61 238.4 328 43.3
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 1.5e-60 237.3 314 41.7
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 1.5e-60 237.3 327 43.4
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 4.0e-58 229.2 345 41.4
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 1.5e-57 227.3 307 38.4
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 7.5e-57 224.9 340 40.3
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.7e-56 223.8 303 44.6
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 7.0e-55 218.4 410 35.1
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 4.6e-54 215.7 425 34.1
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 6.0e-54 215.3 341 38.1
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.7e-53 213.8 314 42.0
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 5.6e-52 208.8 344 36.9
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 2.8e-51 206.5 315 38.4
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 1.8e-50 203.8 282 44.0
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 3.1e-50 203.0 317 40.7
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 9.8e-49 198.0 360 37.5
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 1.7e-48 197.2 315 36.2
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 3.7e-48 196.1 267 41.9
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 1.1e-47 194.5 336 37.8
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 2.0e-46 190.3 371 32.9
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 2.7e-46 189.9 287 39.7
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 7.8e-46 188.3 259 39.4
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 3.3e-44 183.0 346 35.8
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 1.8e-42 177.2 333 37.2
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 1.8e-42 177.2 297 38.7
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 3.7e-40 169.5 317 36.0
Eucgr.L01520 Eucalyptus grandis HOM05D007638 ORTHO05D009805 3.7e-40 169.5 133 69.9
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 6.4e-40 168.7 313 34.5
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 9.2e-39 164.9 371 31.8
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 6.0e-38 162.2 177 47.5
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 8.1e-35 151.8 209 35.9
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 2.4e-34 150.2 164 44.5
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 3.1e-34 149.8 366 31.7
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 1.6e-30 137.5 308 33.8
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 5.8e-25 119.0 244 35.2
CSS0041058 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 5.1e-21 105.9 118 47.5
Ca_04506_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009383 7.9e-14 82.0 98 46.9
DCAR_008449 Daucus carota HOM05D000032 ORTHO05D009383 8.7e-13 78.6 78 50.0
Lsat_1_v5_gn_2_101321 Lactuca sativa HOM05D000032 ORTHO05D009383 8.7e-13 78.6 112 39.3
TPR.G6050 Trifolium pratense HOM05D000032 ORTHO05D009383 8.7e-13 78.6 73 52.1
Lalb_Chr03g0043781 Lupinus albus HOM05D000032 ORTHO05D009383 1.5e-12 77.8 56 57.1
FvH4_6g35850 Fragaria vesca HOM05D000032 ORTHO05D009383 1.9e-12 77.4 68 51.5
FAN14G3162 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.9e-12 77.4 68 51.5
FAN14G3671 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.9e-12 77.4 68 51.5
RcHm_v2.0_Chr2g0147891 Rosa chinensis HOM05D000032 ORTHO05D009383 1.9e-12 77.4 68 51.5
unitig_0.g181 Utricularia gibba HOM05D000032 ORTHO05D009383 1.9e-12 77.4 106 44.3
Migut.D00539 Erythranthe guttata HOM05D000032 ORTHO05D009383 2.5e-12 77.0 77 53.2
Manes.04G096700 Manihot esculenta HOM05D000032 ORTHO05D009383 2.5e-12 77.0 99 42.4
AagrBONN_evm.TU.Sc2ySwM_369.192 Anthoceros agrestis HOM05D000032 ORTHO05D009383 3.3e-12 76.6 59 57.6
CARHR074860 Cardamine hirsuta HOM05D000032 ORTHO05D009383 3.3e-12 76.6 66 51.5
Sopen01g002340 Solanum pennellii HOM05D000032 ORTHO05D009383 3.3e-12 76.6 59 57.6
AUR62016519 Chenopodium quinoa HOM05D000032 ORTHO05D009383 4.3e-12 76.3 73 47.9
FAN05G0348 Fragaria x ananassa HOM05D000032 ORTHO05D009383 4.3e-12 76.3 68 51.5
PGSC0003DMG400032150 Solanum tuberosum HOM05D000032 ORTHO05D009383 4.3e-12 76.3 59 55.9
SGA_v2.0_scaffold8G04635 Striga asiatica HOM05D000032 ORTHO05D009383 4.3e-12 76.3 69 53.6
Aqoxy7G03583 Aquilegia oxysepala HOM05D000032 ORTHO05D009383 5.6e-12 75.9 61 57.4
EL10Ac7g17945 Beta vulgaris HOM05D000032 ORTHO05D009383 5.6e-12 75.9 92 44.6
Glyma.02G068300 Glycine max HOM05D000032 ORTHO05D009383 5.6e-12 75.9 55 60.0
Lj3g0015614 Lotus japonicus HOM05D000032 ORTHO05D009383 5.6e-12 75.9 72 48.6
Ah.15g094020 Amaranthus hybridus HOM05D000032 ORTHO05D009383 7.4e-12 75.5 67 53.7
ClCG05G012450 Citrullus lanatus HOM05D000032 ORTHO05D009383 7.4e-12 75.5 75 46.7
PGR044G2709 Punica granatum HOM05D000032 ORTHO05D009383 7.4e-12 75.5 67 53.7
MBI11_g17278_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D009383 9.6e-12 75.1 65 55.4
Cfa010055 Carpinus fangiana HOM05D001005 ORTHO05D000836 1.3e-11 74.7 68 51.5
CsaV3_3G020080 Cucumis sativus L. HOM05D000032 ORTHO05D009383 1.3e-11 74.7 61 55.7
Medtr6g033070 Medicago truncatula HOM05D000032 ORTHO05D009383 1.3e-11 74.7 90 44.4
Peaxi162Scf00192g00012 Petunia axillaris HOM05D000032 ORTHO05D009383 1.3e-11 74.7 95 43.2
vmacro21760 Vaccinium macrocarpon HOM05D000032 ORTHO05D009383 1.3e-11 74.7 73 46.6
Glyma.16G149800 Glycine max HOM05D000032 ORTHO05D009383 1.6e-11 74.3 45 68.9
Lj1A470G20 Lonicera japonica HOM05D000032 ORTHO05D009383 1.6e-11 74.3 61 60.7
Lj1A478G35 Lonicera japonica HOM05D000032 ORTHO05D009383 1.6e-11 74.3 61 60.7
PSO384G0785 Papaver somniferum HOM05D000032 ORTHO05D009383 1.6e-11 74.3 57 54.4
Psat1g014560 Pisum sativum HOM05D000032 ORTHO05D009383 1.6e-11 74.3 72 52.8
Solyc01g006340.3 Solanum lycopersicum HOM05D000032 ORTHO05D009383 1.6e-11 74.3 43 72.1
VMungo0464G1688 Vigna mungo HOM05D000032 ORTHO05D009383 1.6e-11 74.3 63 52.4
CDE07G0397 Ceratophyllum demersum HOM05D000032 ORTHO05D009383 2.1e-11 73.9 43 67.4
CBR_g3873 Chara braunii HOM05D000032 ORTHO05D009383 2.1e-11 73.9 39 76.9
Hma1.2p1_0098F.1_g048240 Hydrangea macrophylla HOM05D000032 ORTHO05D009383 2.1e-11 73.9 68 52.9
THA.LOC104823368 Tarenaya hassleriana HOM05D000032 ORTHO05D009383 2.1e-11 73.9 44 68.2
MSTRG.18394 Avicennia marina HOM05D000032 ORTHO05D009383 2.8e-11 73.6 43 72.1
HanXRQChr14g0453351 Helianthus annuus HOM05D000032 ORTHO05D009383 2.8e-11 73.6 58 55.2
MELO3C014755.2 Cucumis melo HOM05D000032 ORTHO05D009383 3.7e-11 73.2 54 57.4
FAN02G2103 Fragaria x ananassa HOM05D000032 ORTHO05D009383 3.7e-11 73.2 40 72.5
FAN09G2555 Fragaria x ananassa HOM05D000032 ORTHO05D009383 3.7e-11 73.2 67 50.7
Potri.014G140100 Populus trichocarpa HOM05D000032 ORTHO05D009383 3.7e-11 73.2 72 48.6
Aa31LG5G11250 Aethionema arabicum HOM05D000032 ORTHO05D009383 4.8e-11 72.8 53 60.4
Gohir.A10G069700 Gossypium hirsutum HOM05D000032 ORTHO05D009383 4.8e-11 72.8 88 44.3
Zm00001eb235630 Zea mays HOM05D000032 ORTHO05D009383 4.8e-11 72.8 46 65.2
AL3G10020 Arabidopsis lyrata HOM05D000032 ORTHO05D009383 6.2e-11 72.4 41 68.3
arahy.Tifrunner.gnm1.ann1.8UB6M3 Arachis hypogaea HOM05D000032 ORTHO05D009383 6.2e-11 72.4 75 53.3
TWI32G0219 Tripterygium wilfordii HOM05D000032 ORTHO05D009383 6.2e-11 72.4 57 54.4
Nitab4.5_0003436g0100 Nicotiana tabacum HOM05D000032 ORTHO05D009383 8.1e-11 72.0 80 45.0
Eucgr.K02338 Eucalyptus grandis HOM05D000032 ORTHO05D009383 1.1e-10 71.6 58 55.2
Eucgr.L03255 Eucalyptus grandis HOM05D000032 ORTHO05D009383 1.1e-10 71.6 58 55.2
Sp3g00020 Schrenkiella parvula HOM05D000032 ORTHO05D009383 1.1e-10 71.6 41 70.7
Atru.chr12.440 Acer truncatum HOM05D000032 ORTHO05D009383 1.4e-10 71.2 59 57.6
ATR0824G065 Amborella trichopoda HOM05D000032 ORTHO05D009383 1.4e-10 71.2 62 48.4
Nn3g18407 Nelumbo nucifera HOM05D000032 ORTHO05D009383 1.4e-10 71.2 44 68.2
Pp3c8_12050 Physcomitrium patens HOM05D000032 ORTHO05D009383 1.4e-10 71.2 41 73.2
GSVIVG01032945001 Vitis vinifera HOM05D007638 ORTHO05D009383 1.4e-10 71.2 40 72.5
arahy.Tifrunner.gnm1.ann1.BLPY9G Arachis hypogaea HOM05D007638 ORTHO05D009383 1.8e-10 70.9 55 58.2
CAN.G140.9 Capsicum annuum HOM05D000032 ORTHO05D009383 1.8e-10 70.9 80 47.5
AUR62001157 Chenopodium quinoa HOM05D000032 ORTHO05D009383 1.8e-10 70.9 65 50.8
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 1.8e-10 70.9 40 72.5
Cpa.g.sc17.215 Carica papaya HOM05D000032 ORTHO05D009383 2.4e-10 70.5 46 63.0
Gohir.D10G081800 Gossypium hirsutum HOM05D000032 ORTHO05D009383 2.4e-10 70.5 88 43.2
arahy.Tifrunner.gnm1.ann1.U3NDHF Arachis hypogaea HOM05D000032 ORTHO05D009383 3.1e-10 70.1 75 52.0
CSS0019503 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 3.1e-10 70.1 40 75.0
CSS0028588 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 3.1e-10 70.1 40 75.0
ECA238G2389 Erigeron canadensis HOM05D000032 ORTHO05D009383 4.0e-10 69.7 69 52.2
Prupe.3G315400 Prunus persica HOM05D001005 ORTHO05D000836 4.0e-10 69.7 40 67.5
AT3G02065 Arabidopsis thaliana HOM05D000032 ORTHO05D009383 5.3e-10 69.3 41 65.9
Ciclev10017882m.g Citrus clementina HOM05D000032 ORTHO05D009383 5.3e-10 69.3 51 54.9
Sc14g0008440 Simmondsia chinensis HOM05D000032 ORTHO05D009383 5.3e-10 69.3 43 67.4
CiPaw.14G093500 Carya illinoinensis HOM05D000032 ORTHO05D009383 6.9e-10 68.9 82 43.9
Cc01_g03330 Coffea canephora HOM05D000032 ORTHO05D009383 6.9e-10 68.9 40 67.5
TAR633G1362 Trochodendron aralioides HOM05D000032 ORTHO05D009383 6.9e-10 68.9 43 67.4
Sabra14G0105500 Salix brachista HOM05D000032 ORTHO05D009383 1.2e-09 68.2 44 63.6
Duzib187G1127 Durio zibethinus HOM05D000032 ORTHO05D009383 2.0e-09 67.4 49 57.1
PSO339G1569 Papaver somniferum HOM05D000032 ORTHO05D009383 2.0e-09 67.4 43 62.8
QL02p068178 Quercus lobata HOM05D000032 ORTHO05D009383 2.0e-09 67.4 52 57.7
Thecc.04G052100 Theobroma cacao HOM05D000032 ORTHO05D009383 2.0e-09 67.4 44 63.6
Gorai.011G088700 Gossypium raimondii HOM05D000032 ORTHO05D009383 3.4e-09 66.6 88 39.8
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 3.4e-09 66.6 41 63.4
Carub.0003s0002 Capsella rubella HOM05D000032 ORTHO05D009383 4.5e-09 66.2 41 63.4
Thhalv10020567m.g Eutrema salsugineum HOM05D000032 ORTHO05D009383 4.5e-09 66.2 40 62.5
SHI50144 Sapria himalayana HOM05D000032 ORTHO05D009383 4.5e-09 66.2 44 63.6
EL10Ac9g22788 Beta vulgaris HOM05D000032 ORTHO05D009383 7.6e-09 65.5 114 36.0
COL.COLO4_13406 Corchorus olitorius HOM05D000032 ORTHO05D009383 9.9e-09 65.1 41 65.9
MD17G1003800 Malus domestica HOM05D000032 ORTHO05D009383 9.9e-09 65.1 40 65.0
SMO201G0222 Selaginella moellendorffii HOM05D000032 ORTHO05D009383 9.9e-09 65.1 63 50.8
Migut.A00966 Erythranthe guttata HOM05D007638 ORTHO05D009805 2.1e-06 57.4 64 51.6
CSS0012229 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 2.7e-06 57.0 48 58.3
Haze_14989 Corylus avellana HOM05D000032 ORTHO05D009383 4.6e-06 56.2 41 61.0


User provided reference genes

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