Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 0.0e+00 1484.2 735 100.0
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 1.7e-302 1042.3 721 73.9
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 1.0e-291 1006.5 817 63.2
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 4.0e-291 1004.6 702 71.8
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 2.2e-289 998.8 773 66.4
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 5.5e-285 984.2 743 65.7
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 5.5e-285 984.2 706 69.1
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 2.1e-284 982.2 726 68.2
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 3.6e-284 981.5 713 68.4
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 8.0e-284 980.3 700 68.3
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 1.5e-282 976.1 592 77.9
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 4.4e-282 974.5 698 68.9
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 1.8e-280 969.1 721 65.7
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 5.4e-280 967.6 696 68.1
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 7.0e-280 967.2 687 69.4
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 1.2e-279 966.5 709 68.0
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 1.0e-278 963.4 692 68.2
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 2.1e-276 955.7 690 67.4
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 3.6e-276 954.9 713 66.5
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 3.0e-275 951.8 697 66.7
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 8.8e-275 950.3 755 64.2
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 2.0e-274 949.1 691 68.6
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 9.8e-274 946.8 719 65.1
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 1.3e-273 946.4 710 65.5
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 1.8e-272 942.6 665 69.0
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 7.0e-272 940.6 655 69.3
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 6.6e-270 934.1 690 68.4
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 8.6e-270 933.7 667 70.3
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 1.1e-269 933.3 621 71.8
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 8.0e-268 927.2 781 60.7
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 1.0e-267 926.8 786 60.2
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 3.0e-267 925.2 669 68.0
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 3.0e-267 925.2 673 67.5
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 1.7e-265 919.5 619 69.5
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 8.3e-265 917.1 649 67.2
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 2.4e-264 915.6 699 64.9
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 9.2e-264 913.7 606 72.3
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 1.2e-263 913.3 682 67.2
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 2.0e-263 912.5 737 61.6
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 3.0e-262 908.7 793 59.5
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 6.6e-262 907.5 747 62.4
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 2.5e-261 905.6 685 66.3
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 3.3e-261 905.2 611 71.5
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 5.6e-261 904.4 647 68.3
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.8e-259 899.4 691 65.4
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 1.2e-258 896.7 600 72.0
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 1.2e-258 896.7 699 64.8
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 6.4e-257 891.0 577 73.1
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 7.0e-256 887.5 590 71.5
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 2.0e-255 885.9 728 61.4
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 1.1e-253 880.2 606 69.6
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 1.9e-253 879.4 762 59.2
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 5.6e-253 877.9 604 68.4
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 6.8e-251 870.9 577 71.9
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 1.7e-249 866.3 577 71.6
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 3.7e-249 865.1 745 60.1
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 1.6e-247 859.8 709 62.5
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 2.3e-246 855.9 887 52.4
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 3.0e-246 855.5 736 62.1
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 3.9e-246 855.1 751 59.9
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 8.6e-246 854.0 982 49.1
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 1.9e-245 852.8 788 56.9
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 4.7e-244 848.2 594 66.7
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 6.8e-243 844.3 690 63.0
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.1e-240 837.0 591 70.1
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 3.2e-240 835.5 533 73.7
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 2.7e-239 832.4 565 71.7
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 3.5e-239 832.0 643 62.8
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 8.7e-238 827.4 694 62.1
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 3.3e-237 825.5 680 62.9
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 1.6e-236 823.2 520 74.2
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 2.8e-236 822.4 556 71.9
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 1.0e-230 803.9 544 70.8
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 4.8e-228 795.0 537 70.4
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 1.3e-225 786.9 683 60.2
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 6.4e-225 784.6 533 72.2
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 1.1e-221 773.9 609 63.4
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 3.7e-220 768.8 779 54.3
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 2.0e-218 763.1 483 73.7
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 9.9e-218 760.8 504 73.4
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 1.6e-212 743.4 511 71.0
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 5.8e-210 734.9 519 67.8
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 1.6e-207 726.9 565 64.2
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.1e-207 726.5 510 67.5
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 4.1e-203 712.2 517 66.0
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 2.2e-201 706.4 590 59.5
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 1.4e-200 703.7 687 55.9
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.8e-198 696.8 506 67.8
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 1.8e-190 670.2 519 66.5
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 8.8e-190 667.9 438 73.1
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 4.8e-188 662.1 589 57.9
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 2.9e-185 652.9 425 74.1
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 1.3e-177 627.5 393 75.3
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 1.1e-176 624.4 760 48.6
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 2.0e-170 603.6 697 50.5
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 1.5e-157 560.8 647 49.8
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 4.3e-144 516.2 335 73.7
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 4.9e-140 502.7 642 44.7
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 3.9e-137 493.0 375 62.4
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 4.2e-115 419.9 290 70.0
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 3.0e-97 360.5 443 48.1
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 2.0e-93 347.8 209 75.1
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.2e-85 322.0 267 61.8
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 3.7e-79 300.4 297 54.9
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.2e-76 291.2 692 31.9
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 8.2e-71 272.7 245 58.0
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 8.2e-71 272.7 306 48.4
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 1.1e-70 272.3 230 56.1
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 6.5e-68 263.1 259 53.3
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 5.5e-51 206.8 204 49.5
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 1.4e-49 202.2 209 50.2
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 4.0e-49 200.7 241 45.6
MBI04_g31964_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 3.4e-48 197.6 185 58.4
FAN08G1421 Fragaria x ananassa HOM05D005348 ORTHO05D006635 7.0e-46 189.9 137 72.3
Glyma.11G176306 Glycine max HOM05D005348 ORTHO05D006635 8.0e-42 176.4 91 84.6
Glyma.01G216933 Glycine max HOM05D005348 ORTHO05D006635 2.8e-39 167.9 115 68.7
Cre16.g674852 Chlamydomonas reinhardtii HOM05D005348 ORTHO05D006635 2.0e-37 161.8 652 25.5
HanXRQChr02g0035411 Helianthus annuus HOM05D005348 ORTHO05D006635 2.9e-36 157.9 139 54.7
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 1.1e-35 156.0 582 26.1
FAN08G1570 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.1e-35 156.0 184 50.0
Mapoly0066s0032 Marchantia polymorpha HOM05D005348 ORTHO05D006635 6.1e-34 150.2 516 24.6
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 6.8e-33 146.7 317 30.3
Gohir.D11G021150 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.3e-31 142.5 120 61.7
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 1.3e-31 142.5 202 43.1
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.2e-30 137.9 147 51.7
Glyma.11G026250 Glycine max HOM05D005348 ORTHO05D006635 1.6e-29 135.6 89 75.3
Lj8A237G27 Lonicera japonica HOM05D005348 ORTHO05D006635 5.0e-28 130.6 82 75.6
Mapoly0035s0066 Marchantia polymorpha HOM05D005348 ORTHO05D006635 2.8e-26 124.8 634 23.8
ATR0757G119 Amborella trichopoda HOM05D005348 ORTHO05D006635 6.4e-23 113.6 162 40.1
FAN13G0849 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.1e-21 108.6 97 63.9
arahy.Tifrunner.gnm1.ann1.AXGL4F Arachis hypogaea HOM05D005348 ORTHO05D006635 1.2e-18 99.4 59 74.6
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 1.7e-15 89.0 64 65.6
CsaV3_6G021380 Cucumis sativus L. HOM05D005348 ORTHO05D006635 3.6e-10 71.2 132 33.3


User provided reference genes

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