Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00317 Eucalyptus grandis HOM05D004468 ORTHO05D008180 4.9e-81 305.1 241 100.0
QL05p059278 Quercus lobata HOM05D004468 ORTHO05D008180 1.1e-29 134.4 236 38.1
Dinv30712 Davidia involucrata HOM05D004468 ORTHO05D008180 7.4e-29 131.7 237 37.6
Dinv05249 Davidia involucrata HOM05D004468 ORTHO05D008180 2.4e-27 126.7 237 33.8
Dinv33636 Davidia involucrata HOM05D004468 ORTHO05D008180 1.7e-25 120.6 237 33.8
Manes.15G119000 Manihot esculenta HOM05D004468 ORTHO05D008180 1.7e-25 120.6 236 33.9
Cfa000973 Carpinus fangiana HOM05D004468 ORTHO05D008180 2.9e-25 119.8 236 39.8
Potri.011G080000 Populus trichocarpa HOM05D004468 ORTHO05D008180 2.9e-25 119.8 243 31.3
Manes.17G067600 Manihot esculenta HOM05D004468 ORTHO05D008180 3.8e-25 119.4 233 44.6
TWI53G1884 Tripterygium wilfordii HOM05D004468 ORTHO05D008180 3.8e-25 119.4 236 39.4
Ciclev10016464m.g Citrus clementina HOM05D004468 ORTHO05D008180 1.1e-24 117.9 237 32.5
Thecc.06G154000 Theobroma cacao HOM05D004468 ORTHO05D008180 1.1e-24 117.9 236 31.4
Haze_05549 Corylus avellana HOM05D004468 ORTHO05D008180 5.5e-24 115.5 237 37.6
COL.COLO4_06070 Corchorus olitorius HOM05D004468 ORTHO05D008180 9.4e-24 114.8 236 33.1
Atru.chr10.1342 Acer truncatum HOM05D004468 ORTHO05D008180 4.7e-23 112.5 243 49.8
Gohir.D05G152600 Gossypium hirsutum HOM05D004468 ORTHO05D008180 7.9e-23 111.7 236 33.9
Gorai.009G156700 Gossypium raimondii HOM05D004468 ORTHO05D008180 7.9e-23 111.7 236 33.5
MD05G1288800 Malus domestica HOM05D004468 ORTHO05D008180 1.0e-22 111.3 238 31.5
Duzib160G0871 Durio zibethinus HOM05D004468 ORTHO05D008180 1.4e-22 110.9 236 34.3
Prupe.4G077100 Prunus persica HOM05D004468 ORTHO05D008180 1.4e-22 110.9 237 32.1
RcHm_v2.0_Chr5g0013411 Rosa chinensis HOM05D004468 ORTHO05D008180 3.0e-22 109.8 241 44.0
Gohir.A05G150000 Gossypium hirsutum HOM05D004468 ORTHO05D008180 6.7e-22 108.6 236 33.9
CAN.G257.6 Capsicum annuum HOM05D004468 ORTHO05D008180 8.8e-22 108.2 237 35.4
Gohir.A10G039100 Gossypium hirsutum HOM05D004468 ORTHO05D008180 8.8e-22 108.2 236 29.7
Gorai.011G042000 Gossypium raimondii HOM05D004468 ORTHO05D008180 1.5e-21 107.5 236 29.2
Actinidia07680 Actinidia chinensis HOM05D004468 ORTHO05D011136 2.0e-21 107.1 209 64.6
CANSAT35G0919 Cannabis sativa HOM05D004468 ORTHO05D008180 2.0e-21 107.1 242 62.0
Sabra11G0068700 Salix brachista HOM05D004468 ORTHO05D008180 2.0e-21 107.1 243 34.6
Sabra11G0070800 Salix brachista HOM05D004468 ORTHO05D008180 2.0e-21 107.1 243 34.6
Actinidia39559 Actinidia chinensis HOM05D004468 ORTHO05D008180 2.6e-21 106.7 240 57.5
Duzib235G1094 Durio zibethinus HOM05D004468 ORTHO05D008180 3.3e-21 106.3 241 32.4
Nitab4.5_0001040g0150 Nicotiana tabacum HOM05D004468 ORTHO05D008180 5.7e-21 105.5 236 32.2
Nitab4.5_0001655g0240 Nicotiana tabacum HOM05D004468 ORTHO05D008180 5.7e-21 105.5 236 51.7
CiPaw.09G126600 Carya illinoinensis HOM05D004468 ORTHO05D008180 7.4e-21 105.1 236 33.5
MD10G1264900 Malus domestica HOM05D004468 ORTHO05D008180 2.8e-20 103.2 238 30.3
MD05G1288000 Malus domestica HOM05D004468 ORTHO05D008180 4.8e-20 102.4 212 32.1
FvH4_3g06000 Fragaria vesca HOM05D004468 ORTHO05D008180 6.3e-20 102.1 239 38.1
FAN21G2255 Fragaria x ananassa HOM05D004468 ORTHO05D008180 8.2e-20 101.7 238 39.1
PGSC0003DMG400008295 Solanum tuberosum HOM05D004468 ORTHO05D008180 1.4e-19 100.9 237 34.6
Sopen02g019960 Solanum pennellii HOM05D004468 ORTHO05D008180 2.4e-19 100.1 239 32.2
MD05G1288300 Malus domestica HOM05D004468 ORTHO05D008180 3.1e-19 99.8 212 32.1
FAN11G2204 Fragaria x ananassa HOM05D004468 ORTHO05D008180 5.3e-19 99.0 238 37.4
Peaxi162Scf00291g00015 Petunia axillaris HOM05D004468 ORTHO05D008180 5.3e-19 99.0 235 31.1
TAR629G0415 Trochodendron aralioides HOM05D004468 ORTHO05D008180 5.3e-19 99.0 244 43.9
vmacro10945 Vaccinium macrocarpon HOM05D004468 ORTHO05D008180 7.0e-19 98.6 236 28.4
FAN25G3280 Fragaria x ananassa HOM05D004468 ORTHO05D008180 9.1e-19 98.2 238 38.7
TPR.G4895 Trifolium pratense HOM05D004468 ORTHO05D008180 1.2e-18 97.8 239 30.5
CiPaw.10G093500 Carya illinoinensis HOM05D004468 ORTHO05D008180 1.6e-18 97.4 236 33.1
Duzib192G0660 Durio zibethinus HOM05D004468 ORTHO05D008180 1.6e-18 97.4 236 29.7
RhsimUnG0149400 Rhododendron simsii HOM05D004468 ORTHO05D008180 1.6e-18 97.4 238 37.8
FAN16G0098 Fragaria x ananassa HOM05D004468 ORTHO05D008180 2.6e-18 96.7 238 37.8
Solyc02g070880.1 Solanum lycopersicum HOM05D004468 ORTHO05D008180 2.6e-18 96.7 239 31.8
Lalb_Chr13g0291991 Lupinus albus HOM05D004468 ORTHO05D008180 3.5e-18 96.3 214 35.0
Lj1P1184T76 Lonicera japonica HOM05D004468 ORTHO05D008180 5.9e-18 95.5 209 62.7
Cc09_g09510 Coffea canephora HOM05D004468 ORTHO05D008180 7.7e-18 95.1 236 30.9
CsaV3_6G051560 Cucumis sativus L. HOM05D004468 ORTHO05D008180 1.0e-17 94.7 241 31.1
MELO3C007151.2 Cucumis melo HOM05D004468 ORTHO05D008180 1.3e-17 94.4 241 61.4
Sc17g0005060 Simmondsia chinensis HOM05D004468 ORTHO05D008180 2.2e-17 93.6 236 33.1
Ca_18271_v3 Cicer arietinum L. HOM05D004468 ORTHO05D008180 8.5e-17 91.7 240 29.2
THA.LOC104820641 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 3.2e-16 89.7 237 29.5
Aqoxy1G01779 Aquilegia oxysepala HOM05D004468 ORTHO05D008180 4.2e-16 89.4 190 28.9
Dinv32278 Davidia involucrata HOM05D004468 ORTHO05D011136 5.5e-16 89.0 122 41.0
Hma1.2p1_0164F.1_g073090 Hydrangea macrophylla HOM05D004468 ORTHO05D008180 7.2e-16 88.6 242 28.1
Medtr4g096660 Medicago truncatula HOM05D004468 ORTHO05D008180 1.2e-15 87.8 205 32.7
Psat7g090880 Pisum sativum HOM05D004468 ORTHO05D008180 4.7e-15 85.9 240 28.8
Nn4g26508 Nelumbo nucifera HOM05D004468 ORTHO05D008180 4.0e-14 82.8 98 40.8
Phvul.002G194400 Phaseolus vulgaris HOM05D004468 ORTHO05D008180 5.2e-14 82.4 216 29.2
MSTRG.13248 Avicennia marina HOM05D004468 ORTHO05D008180 6.7e-14 82.0 237 30.8
Sed0007839 Sechium edule HOM05D004468 ORTHO05D008180 1.2e-13 81.3 236 26.7
Sed0014650 Sechium edule HOM05D004468 ORTHO05D008180 3.3e-13 79.7 239 27.2
THA.LOC104812665 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 4.4e-13 79.3 223 32.3
BcaB03g13850 Brassica carinata HOM05D004468 ORTHO05D008180 5.7e-13 79.0 234 29.5
RhsimUnG0174800 Rhododendron simsii HOM05D004468 ORTHO05D008180 5.7e-13 79.0 122 36.9
A07p10110 Brassica napus HOM05D004468 ORTHO05D008180 7.5e-13 78.6 224 54.0
Glyma.05G129400 Glycine max HOM05D004468 ORTHO05D008180 7.5e-13 78.6 237 27.4
Os02g0315600 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 7.5e-13 78.6 191 29.8
Migut.H01376 Erythranthe guttata HOM05D004468 ORTHO05D008180 9.7e-13 78.2 200 31.0
PSO541G2725 Papaver somniferum HOM05D004468 ORTHO05D008180 9.7e-13 78.2 204 28.4
arahy.Tifrunner.gnm1.ann1.2E3FWC Arachis hypogaea HOM05D004468 ORTHO05D008180 2.2e-12 77.0 216 28.7
Os03g0591300 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 2.8e-12 76.6 230 32.6
Zm00001eb384990 Zea mays HOM05D004468 ORTHO05D008180 3.7e-12 76.3 205 38.0
C07p15630 Brassica napus HOM05D004468 ORTHO05D008180 4.8e-12 75.9 210 35.7
Os01g0626900 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 4.8e-12 75.9 211 28.4
SalBow6G4733 Salvia bowleyana HOM05D004468 ORTHO05D008180 8.2e-12 75.1 207 28.0
A08p24790 Brassica napus HOM05D004468 ORTHO05D008180 1.1e-11 74.7 235 38.3
BraA08t34433Z Brassica rapa HOM05D004468 ORTHO05D008180 1.1e-11 74.7 235 38.3
SalBow7G0317 Salvia bowleyana HOM05D004468 ORTHO05D008180 1.1e-11 74.7 207 28.0
BcaC06g35475 Brassica carinata HOM05D004468 ORTHO05D008180 1.4e-11 74.3 210 43.3
BolC7t42051H Brassica oleracea HOM05D004468 ORTHO05D008180 1.4e-11 74.3 210 43.3
VMungo0251G1661 Vigna mungo HOM05D004468 ORTHO05D008180 1.4e-11 74.3 216 36.1
AT1G29950 Arabidopsis thaliana HOM05D004468 ORTHO05D008180 1.8e-11 73.9 205 59.0
Nn3g20652 Nelumbo nucifera HOM05D004468 ORTHO05D008180 2.4e-11 73.6 91 44.0
Sp1g25810 Schrenkiella parvula HOM05D004468 ORTHO05D008180 2.4e-11 73.6 229 32.3
BraA07t28804Z Brassica rapa HOM05D004468 ORTHO05D008180 3.1e-11 73.2 208 51.9
Lj4g0016525 Lotus japonicus HOM05D004468 ORTHO05D008180 4.1e-11 72.8 212 27.4
Oeu052384.1 Olea europaea HOM05D004468 ORTHO05D008180 4.1e-11 72.8 222 26.1
C03p76270 Brassica napus HOM05D004468 ORTHO05D008180 9.1e-11 71.6 235 38.7
BolC3t19884H Brassica oleracea HOM05D004468 ORTHO05D008180 9.1e-11 71.6 235 38.7
BcaC01g00145 Brassica carinata HOM05D004468 ORTHO05D008180 1.2e-10 71.2 236 39.0
Glyma.08G084100 Glycine max HOM05D004468 ORTHO05D008180 1.6e-10 70.9 238 28.2
PSO675G1482 Papaver somniferum HOM05D004468 ORTHO05D008180 4.5e-10 69.3 204 27.0
Thhalv10009888m.g Eutrema salsugineum HOM05D004468 ORTHO05D008180 7.7e-10 68.6 231 29.4
CARHR029490 Cardamine hirsuta HOM05D004468 ORTHO05D008180 1.7e-09 67.4 224 54.0
Hund21515 Selenicereus undatus HOM05D004468 ORTHO05D008180 1.7e-09 67.4 262 26.0
AL1G43790 Arabidopsis lyrata HOM05D004468 ORTHO05D008180 2.9e-09 66.6 230 37.4
MSTRG.14764 Avicennia marina HOM05D004468 ORTHO05D008180 6.5e-09 65.5 220 25.5
THA.LOC104814285 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 1.1e-08 64.7 212 38.7
CDE02G0697 Ceratophyllum demersum HOM05D004468 ORTHO05D008180 1.5e-08 64.3 218 25.7
Zm00001eb278170 Zea mays HOM05D004468 ORTHO05D008180 1.5e-08 64.3 204 49.0
Carub.0001s2818 Capsella rubella HOM05D004468 ORTHO05D008180 1.6e-07 60.8 237 42.6
BcaB03g12186 Brassica carinata HOM05D004468 ORTHO05D008180 2.7e-07 60.1 235 39.1
Gohir.D10G039900 Gossypium hirsutum HOM05D004468 ORTHO05D008180 3.6e-07 59.7 238 24.4
Oeu040960.2 Olea europaea HOM05D004468 ORTHO05D008180 4.7e-07 59.3 112 37.5
BcaC06g35479 Brassica carinata HOM05D000171 ORTHO05D008180 6.1e-07 58.9 64 45.3
BolC7t42047H Brassica oleracea HOM05D004468 ORTHO05D008180 6.1e-07 58.9 64 45.3
Zm00001eb277350 Zea mays HOM05D004468 ORTHO05D008180 8.0e-07 58.5 63 41.3
C07p15610 Brassica napus HOM05D004468 ORTHO05D008180 3.0e-06 56.6 64 43.8
Lsat_1_v5_gn_1_96101 Lactuca sativa HOM05D004468 ORTHO05D008180 3.0e-06 56.6 211 36.5
MD05G1288500 Malus domestica HOM05D004468 ORTHO05D008180 3.0e-06 56.6 35 65.7
ECA236G0629 Erigeron canadensis HOM05D004468 ORTHO05D011136 5.2e-06 55.8 37 67.6
HanXRQChr04g0118301 Helianthus annuus HOM05D004468 ORTHO05D008180 8.8e-06 55.1 37 67.6


User provided reference genes

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