Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.5e-104 382.9 194 100.0
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 5.3e-102 374.4 194 97.9
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 5.9e-69 264.6 197 71.6
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 3.0e-65 252.3 198 69.2
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.5e-64 250.0 174 75.3
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 1.7e-63 246.5 173 75.1
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 1.7e-63 246.5 198 68.7
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.2e-63 246.1 173 76.9
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 2.2e-63 246.1 173 76.9
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 3.7e-63 245.4 198 70.7
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 6.3e-63 244.6 171 76.0
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 2.4e-62 242.7 182 72.0
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 3.1e-62 242.3 196 70.4
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 4.1e-62 241.9 190 70.0
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 9.1e-62 240.7 195 68.2
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 9.1e-62 240.7 175 75.4
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 1.2e-61 240.4 192 68.8
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.7e-61 239.2 195 70.3
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 3.5e-61 238.8 198 67.7
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.9e-61 238.0 173 72.8
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 5.9e-61 238.0 173 72.8
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.0e-60 237.3 173 72.8
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 1.3e-60 236.9 186 70.4
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.3e-60 236.9 197 67.0
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.3e-60 236.9 174 73.0
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 2.2e-60 236.1 192 67.7
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.2e-60 236.1 195 67.2
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 2.9e-60 235.7 175 74.9
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 2.9e-60 235.7 173 75.7
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.9e-60 235.7 200 67.0
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 5.0e-60 235.0 174 72.4
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.1e-59 233.8 170 73.5
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 1.5e-59 233.4 174 71.3
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.9e-59 233.0 174 73.6
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.5e-59 232.6 187 67.4
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 5.5e-59 231.5 174 71.8
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 7.2e-59 231.1 178 70.8
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 7.2e-59 231.1 195 68.7
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 9.4e-59 230.7 149 81.2
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 1.2e-58 230.3 196 65.8
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.2e-58 230.3 194 67.5
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 1.6e-58 229.9 195 67.2
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 1.6e-58 229.9 194 66.5
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 2.1e-58 229.6 197 66.0
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.1e-58 229.6 168 72.0
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.1e-58 229.6 195 67.2
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 2.7e-58 229.2 195 68.7
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 4.7e-58 228.4 176 70.5
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 6.1e-58 228.0 180 70.6
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 6.1e-58 228.0 201 64.2
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.4e-57 226.9 171 71.9
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.4e-57 226.9 192 67.2
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.8e-57 226.5 179 69.8
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 2.3e-57 226.1 139 84.2
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 2.3e-57 226.1 195 66.7
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 2.3e-57 226.1 157 77.1
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 3.0e-57 225.7 177 66.7
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 4.0e-57 225.3 194 67.5
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.0e-57 225.3 171 72.5
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 4.0e-57 225.3 178 68.5
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 5.2e-57 224.9 153 74.5
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 8.8e-57 224.2 152 75.0
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 8.8e-57 224.2 164 70.1
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.2e-56 223.8 198 63.1
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 2.0e-56 223.0 175 69.7
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 2.6e-56 222.6 166 72.3
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 2.6e-56 222.6 149 74.5
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 2.6e-56 222.6 179 68.7
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.6e-56 222.6 179 67.6
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 3.4e-56 222.2 178 68.0
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 3.4e-56 222.2 180 65.6
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 4.4e-56 221.9 195 66.7
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 4.4e-56 221.9 178 67.4
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 5.7e-56 221.5 196 64.8
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 5.7e-56 221.5 178 67.4
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 9.8e-56 220.7 164 72.0
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 9.8e-56 220.7 173 67.6
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.3e-55 220.3 150 76.7
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.7e-55 219.9 155 73.5
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.7e-55 219.9 162 72.2
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 1.7e-55 219.9 150 76.0
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.2e-55 219.5 149 73.8
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 2.2e-55 219.5 150 78.0
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 2.2e-55 219.5 199 63.8
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 2.8e-55 219.2 150 75.3
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 2.8e-55 219.2 155 74.2
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.8e-55 219.2 150 76.0
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 3.7e-55 218.8 137 80.3
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 4.9e-55 218.4 197 62.4
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 4.9e-55 218.4 174 66.7
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 6.3e-55 218.0 150 76.0
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.1e-54 217.2 182 67.6
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.4e-54 216.9 159 71.1
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 1.4e-54 216.9 192 63.0
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 1.8e-54 216.5 193 65.8
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 3.1e-54 215.7 154 74.7
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 4.1e-54 215.3 182 67.0
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 4.1e-54 215.3 188 63.3
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 5.4e-54 214.9 175 66.3
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 5.4e-54 214.9 151 75.5
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 5.4e-54 214.9 178 66.9
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 1.6e-53 213.4 203 62.1
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 2.7e-53 212.6 155 71.6
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 3.5e-53 212.2 195 62.6
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 3.5e-53 212.2 198 61.1
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.5e-53 211.8 170 67.6
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.0e-52 210.7 141 78.0
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.0e-52 210.7 186 63.4
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 1.0e-52 210.7 174 66.7
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.3e-52 210.3 170 66.5
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.7e-52 209.9 155 70.3
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 2.3e-52 209.5 166 67.5
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 3.8e-52 208.8 155 71.0
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 5.0e-52 208.4 144 77.1
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 5.0e-52 208.4 145 76.6
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 5.0e-52 208.4 145 76.6
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 6.6e-52 208.0 144 77.1
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 6.6e-52 208.0 144 77.1
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 6.6e-52 208.0 138 76.8
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 1.1e-51 207.2 196 63.8
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 3.6e-50 202.2 172 68.0
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.4e-49 200.3 194 62.4
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 2.3e-49 199.5 176 63.6
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 5.2e-49 198.4 134 73.9
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 7.5e-48 194.5 152 68.4
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.3e-47 193.7 114 86.8
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.3e-47 193.7 114 86.8
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 2.2e-47 193.0 115 85.2
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 2.2e-47 193.0 159 66.0
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 2.9e-47 192.6 193 60.6
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 6.4e-47 191.4 113 87.6
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.4e-46 189.5 178 60.1
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 3.2e-46 189.1 174 63.2
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 4.1e-46 188.7 112 83.9
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 9.2e-46 187.6 112 86.6
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 2.7e-45 186.0 112 83.9
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.9e-45 184.9 138 71.0
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 7.8e-45 184.5 174 63.2
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.3e-44 183.7 176 61.4
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.3e-44 183.0 186 57.5
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.0e-44 182.6 176 60.8
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.5e-43 180.3 108 83.3
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 7.3e-43 177.9 168 58.3
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.2e-42 177.2 108 86.1
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.6e-42 176.8 150 65.3
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 1.4e-41 173.7 154 65.6
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 3.1e-41 172.6 192 53.1
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 4.0e-41 172.2 151 64.9
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 7.5e-40 167.9 140 66.4
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 9.8e-40 167.5 198 54.0
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 3.2e-38 162.5 114 72.8
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 5.4e-38 161.8 111 73.0
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 2.1e-34 149.8 114 67.5
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 3.6e-34 149.1 291 36.8
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 3.5e-29 132.5 111 59.5
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.3e-28 130.6 139 58.3
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.0e-28 129.4 109 66.1
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 4.0e-25 119.0 90 70.0
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 2.0e-24 116.7 129 50.4
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 1.7e-20 103.6 91 61.5
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 3.9e-20 102.4 91 60.4
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.5e-19 100.5 86 61.6
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 5.6e-19 98.6 87 63.2
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 3.6e-18 95.9 87 62.1
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 3.6e-18 95.9 87 62.1
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.7e-15 87.0 86 55.8
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 1.6e-13 80.5 44 93.2
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 7.8e-13 78.2 63 63.5
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.3e-12 77.4 49 79.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 1.7e-07 60.5 58 58.6


User provided reference genes

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