Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 5.8e-218 760.8 428 100.0
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.7e-129 466.8 332 71.4
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 7.3e-128 461.5 328 70.1
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 9.5e-128 461.1 329 71.4
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 3.6e-127 459.1 350 67.7
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 6.8e-126 454.9 329 70.2
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 1.5e-125 453.8 329 70.8
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.5e-125 453.8 334 69.5
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 2.6e-125 453.0 331 70.1
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.4e-125 452.2 331 69.5
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.8e-125 451.8 331 69.8
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 7.5e-125 451.4 330 68.5
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 2.9e-124 449.5 331 69.5
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 3.7e-124 449.1 335 68.7
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 2.7e-122 443.0 335 67.5
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 4.6e-122 442.2 331 67.4
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 7.8e-122 441.4 332 69.0
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 1.7e-121 440.3 333 68.8
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 3.0e-121 439.5 331 66.8
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.1e-120 437.6 331 67.7
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 1.9e-120 436.8 335 66.3
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.9e-120 436.8 331 67.4
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.3e-120 436.0 328 67.4
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 4.3e-120 435.6 333 68.2
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 5.6e-120 435.3 333 67.0
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 2.8e-119 433.0 326 68.1
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 3.6e-119 432.6 330 68.5
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 4.7e-119 432.2 329 68.4
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 8.0e-119 431.4 331 66.5
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 1.8e-118 430.3 333 67.6
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.8e-118 430.3 333 65.5
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 2.3e-118 429.9 329 67.8
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 3.1e-118 429.5 329 67.2
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 6.8e-118 428.3 327 69.7
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 8.9e-118 427.9 337 65.0
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 8.9e-118 427.9 327 67.6
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 1.5e-117 427.2 312 70.8
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 1.5e-117 427.2 327 67.3
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 3.4e-117 426.0 331 67.7
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 4.4e-117 425.6 328 66.8
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 4.4e-117 425.6 330 67.9
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 9.8e-117 424.5 333 65.5
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.7e-116 423.7 333 64.6
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 1.7e-116 423.7 382 58.9
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.7e-116 423.7 330 66.7
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 2.2e-116 423.3 328 67.1
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 2.9e-116 422.9 332 66.6
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 2.9e-116 422.9 328 66.8
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 3.7e-116 422.5 332 64.8
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 3.7e-116 422.5 329 67.5
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 4.9e-116 422.2 327 67.6
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 4.9e-116 422.2 326 66.9
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 4.9e-116 422.2 328 65.5
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 6.4e-116 421.8 337 64.4
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 6.4e-116 421.8 333 65.2
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 6.4e-116 421.8 331 66.5
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 8.3e-116 421.4 332 66.0
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.1e-115 421.0 329 66.6
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.4e-115 420.6 334 65.6
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 3.2e-115 419.5 334 64.7
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 4.1e-115 419.1 329 66.3
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 5.4e-115 418.7 329 65.7
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 9.2e-115 417.9 333 65.5
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 9.2e-115 417.9 333 65.5
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 9.2e-115 417.9 326 66.0
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 9.2e-115 417.9 316 66.8
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 1.2e-114 417.5 333 65.5
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 1.2e-114 417.5 327 67.0
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 1.6e-114 417.2 328 66.5
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 2.1e-114 416.8 333 64.6
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 4.6e-114 415.6 334 64.1
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 6.0e-114 415.2 364 61.0
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 7.8e-114 414.8 333 64.3
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 7.8e-114 414.8 332 63.6
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 1.0e-113 414.5 333 62.2
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 1.7e-113 413.7 327 65.7
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 6.6e-113 411.8 329 65.3
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.5e-112 410.6 329 65.7
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 4.3e-112 409.1 341 62.8
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 1.2e-111 407.5 333 63.7
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 2.1e-111 406.8 334 62.3
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.6e-111 406.0 330 63.0
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.8e-110 403.7 326 66.6
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 6.8e-110 401.7 331 63.1
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 8.9e-110 401.4 339 60.5
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.5e-109 400.6 313 64.5
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 1.4e-107 394.0 327 61.8
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 4.6e-106 389.0 295 65.8
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 6.0e-106 388.7 303 66.0
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.0e-105 386.3 326 58.9
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.5e-104 383.3 326 58.9
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 2.1e-103 380.2 328 61.6
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 4.0e-94 349.4 241 73.0
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 2.8e-87 326.6 267 64.8
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 9.0e-86 321.6 232 72.0
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 3.4e-85 319.7 236 69.5
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 4.5e-85 319.3 230 69.6
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 4.9e-84 315.8 347 50.1
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.3e-81 307.0 213 74.6
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 3.0e-81 306.6 343 50.7
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 2.1e-71 273.9 203 69.0
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 2.0e-69 267.3 208 68.3
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.8e-62 244.2 330 45.2
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 3.8e-60 236.5 332 43.4
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 8.8e-57 225.3 328 41.8
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 2.2e-55 220.7 329 39.5
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 2.9e-52 210.3 213 52.1
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 1.4e-33 148.3 129 57.4
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.8e-30 137.9 267 35.6
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 4.5e-29 133.3 84 77.4
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 7.7e-29 132.5 139 50.4
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.8e-22 111.3 93 57.0
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 3.5e-21 107.1 102 52.0
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 5.5e-19 99.8 115 49.6
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 3.0e-17 94.0 118 48.3
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 5.2e-17 93.2 148 45.3
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 3.2e-14 84.0 338 27.2
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 3.5e-13 80.5 330 28.2
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 7.5e-08 62.8 71 40.8
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 1.4e-06 58.5 38 68.4


User provided reference genes

Program Settings