Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 1.4e-96 356.3 178 100.0
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 5.0e-22 108.6 177 39.5
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 1.9e-21 106.7 185 44.9
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 1.2e-20 104.0 186 38.2
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 1.4e-19 100.5 185 40.5
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 8.8e-19 97.8 188 38.3
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 1.5e-18 97.1 177 39.5
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 5.7e-18 95.1 188 38.3
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 7.4e-18 94.7 185 38.9
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 9.7e-18 94.4 180 40.0
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 9.7e-18 94.4 180 40.0
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 2.8e-17 92.8 181 40.3
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 8.2e-17 91.3 178 37.6
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 1.1e-16 90.9 187 36.9
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 4.1e-16 89.0 187 38.5
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 6.9e-16 88.2 186 38.2
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 2.6e-15 86.3 181 40.3
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 7.7e-15 84.7 181 34.8
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.0e-14 82.0 186 37.6
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 2.5e-13 79.7 180 36.1
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 3.2e-13 79.3 183 34.4
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.2e-13 79.0 184 37.5
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 5.5e-13 78.6 184 36.4
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.4e-13 77.8 183 33.9
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.6e-12 77.0 177 32.8
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 1.6e-12 77.0 186 31.2
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 2.1e-12 76.6 184 35.3
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 4.7e-12 75.5 181 37.0
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 1.4e-11 73.9 178 34.3
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 3.0e-11 72.8 182 31.9
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 3.9e-11 72.4 184 34.8
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 3.9e-11 72.4 199 31.7
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 5.2e-11 72.0 186 32.8
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 5.2e-11 72.0 185 34.6
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 1.1e-10 70.9 179 35.2
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 2.0e-10 70.1 186 34.4
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 2.0e-10 70.1 185 33.5
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 2.6e-10 69.7 105 41.9
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 3.3e-10 69.3 179 30.7
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 3.3e-10 69.3 182 29.7
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 7.4e-10 68.2 181 35.9
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.7e-09 67.0 191 32.5
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 2.2e-09 66.6 192 33.3
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 6.3e-09 65.1 184 33.7
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 6.3e-09 65.1 184 31.5
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 8.2e-09 64.7 184 32.1
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 5.3e-08 62.0 185 32.4
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.0e-07 60.1 184 33.2
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 3.5e-07 59.3 52 57.7
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 4.5e-07 58.9 179 30.2
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 1.0e-06 57.8 184 28.8
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 2.9e-06 56.2 111 35.1
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 2.9e-06 56.2 106 37.7
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 3.8e-06 55.8 64 48.4
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 5.0e-06 55.5 177 28.8


User provided reference genes

Program Settings