Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00240 Eucalyptus grandis HOM05D007128 ORTHO05D009059 4.1e-155 552.7 738 100.0
Eucgr.L00553 Eucalyptus grandis HOM05D007128 ORTHO05D009059 2.2e-108 397.5 738 56.5
Haze_00709 Corylus avellana HOM05D007128 ORTHO05D009059 1.7e-92 344.7 737 84.4
Cfa015785 Carpinus fangiana HOM05D007128 ORTHO05D009059 5.0e-92 343.2 723 85.6
TAR633G0543 Trochodendron aralioides HOM05D007128 ORTHO05D009059 6.7e-89 332.8 738 83.3
PGR083G1825 Punica granatum HOM05D007128 ORTHO05D009059 1.1e-88 332.0 730 83.4
CiPaw.01G104100 Carya illinoinensis HOM05D007128 ORTHO05D009059 5.7e-88 329.7 731 82.9
Aqoxy2G03122 Aquilegia oxysepala HOM05D007128 ORTHO05D009059 1.8e-86 324.7 726 82.5
Nn5g27627 Nelumbo nucifera HOM05D007128 ORTHO05D009059 2.9e-84 317.4 736 82.5
RcHm_v2.0_Chr4g0408411 Rosa chinensis HOM05D007128 ORTHO05D009059 5.0e-84 316.6 725 81.5
Phvul.002G041300 Phaseolus vulgaris HOM05D007128 ORTHO05D009059 8.5e-84 315.8 733 80.8
GSVIVG01013571001 Vitis vinifera HOM05D007128 ORTHO05D009059 1.1e-83 315.5 723 78.3
Lj6C70T2 Lonicera japonica HOM05D007128 ORTHO05D009059 1.4e-83 315.1 722 70.6
Prupe.1G186300 Prunus persica HOM05D007128 ORTHO05D009059 1.6e-82 311.6 725 83.3
QL10p046158 Quercus lobata HOM05D007128 ORTHO05D009059 3.6e-82 310.5 736 83.0
FAN07G2448 Fragaria x ananassa HOM05D007128 ORTHO05D009059 8.0e-82 309.3 733 78.6
Manes.14G160600 Manihot esculenta HOM05D007128 ORTHO05D009059 1.1e-80 305.4 728 83.2
Sabra07G0100100 Salix brachista HOM05D007128 ORTHO05D009059 1.1e-80 305.4 735 79.3
Duzib151G0548 Durio zibethinus HOM05D007128 ORTHO05D009059 2.0e-80 304.7 734 82.4
Potri.007G123600 Populus trichocarpa HOM05D007128 ORTHO05D009059 2.6e-80 304.3 735 82.3
CiPaw.01G097300 Carya illinoinensis HOM05D007128 ORTHO05D009059 7.4e-80 302.8 731 82.1
FAN22G1219 Fragaria x ananassa HOM05D007128 ORTHO05D009059 7.4e-80 302.8 724 81.9
FvH4_4g11500 Fragaria vesca HOM05D007128 ORTHO05D009059 4.8e-79 300.1 733 80.6
Atru.chr3.1624 Acer truncatum HOM05D007128 ORTHO05D009059 1.4e-78 298.5 731 81.0
CANSAT78G2527 Cannabis sativa HOM05D007128 ORTHO05D009059 1.8e-78 298.1 731 81.4
Ciclev10018682m.g Citrus clementina HOM05D007128 ORTHO05D009059 2.6e-77 294.3 731 81.1
VMungo1309G2539 Vigna mungo HOM05D007128 ORTHO05D009059 3.5e-77 293.9 723 80.1
LjContig00222g0017157 Lotus japonicus HOM05D007128 ORTHO05D009059 2.5e-75 287.7 736 81.0
Lalb_Chr09g0320101 Lupinus albus HOM05D007128 ORTHO05D009059 5.5e-75 286.6 731 80.2
arahy.Tifrunner.gnm1.ann1.Q2Q9DA Arachis hypogaea HOM05D007128 ORTHO05D009059 9.4e-75 285.8 735 79.7
ClCG08G004220 Citrullus lanatus HOM05D007128 ORTHO05D009059 1.2e-74 285.4 732 68.6
FAN17G2288 Fragaria x ananassa HOM05D007128 ORTHO05D009059 4.7e-74 283.5 730 80.0
arahy.Tifrunner.gnm1.ann1.IE5CWM Arachis hypogaea HOM05D007128 ORTHO05D009059 6.1e-74 283.1 737 79.4
SalBow6G5229 Salvia bowleyana HOM05D007128 ORTHO05D009059 1.4e-73 282.0 734 75.6
Ca_24431_v3 Cicer arietinum L. HOM05D007128 ORTHO05D009059 5.2e-73 280.0 724 81.9
Glyma.11G009000 Glycine max HOM05D007128 ORTHO05D009059 1.2e-72 278.9 731 81.1
MD04G1034700 Malus domestica HOM05D007128 ORTHO05D009059 1.5e-72 278.5 730 78.9
TPR.G18647 Trifolium pratense HOM05D007128 ORTHO05D009059 1.7e-71 275.0 735 78.0
Psat2g189360 Pisum sativum HOM05D007128 ORTHO05D009059 2.2e-71 274.6 735 79.7
Medtr5g007250 Medicago truncatula HOM05D007128 ORTHO05D009059 2.8e-71 274.2 734 80.5
Cc03_g13390 Coffea canephora HOM05D007128 ORTHO05D009059 1.4e-70 271.9 726 81.8
CSS0046383 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 5.3e-70 270.0 723 81.6
PSO566G0116 Papaver somniferum HOM05D007128 ORTHO05D009059 1.6e-69 268.5 725 76.3
Gohir.A02G014300 Gossypium hirsutum HOM05D007128 ORTHO05D009059 1.0e-68 265.8 726 70.8
CSS0003119 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 1.3e-68 265.4 723 81.5
Oeu061587.1 Olea europaea HOM05D007128 ORTHO05D009059 1.7e-68 265.0 719 81.5
TWI38G2031 Tripterygium wilfordii HOM05D007128 ORTHO05D009059 2.2e-68 264.6 731 72.1
MBI11_g35037_MAGBIO Magnolia biondii HOM05D007128 ORTHO05D009059 2.1e-66 258.1 727 80.5
PSO782G4906 Papaver somniferum HOM05D007128 ORTHO05D009059 4.7e-66 256.9 725 78.5
Sc16g0009730 Simmondsia chinensis HOM05D007128 ORTHO05D009059 1.0e-65 255.8 725 78.1
CsaV3_6G003710 Cucumis sativus L. HOM05D007128 ORTHO05D009059 8.8e-65 252.7 731 79.6
Sed0021713 Sechium edule HOM05D007128 ORTHO05D009059 7.5e-64 249.6 731 78.4
Migut.N00468 Erythranthe guttata HOM05D007128 ORTHO05D009059 9.8e-64 249.2 745 74.8
MELO3C011605.2 Cucumis melo HOM05D007128 ORTHO05D009059 2.8e-63 247.7 723 80.1
Rhsim02G0072100 Rhododendron simsii HOM05D007128 ORTHO05D009059 2.8e-63 247.7 723 76.2
CAN.G1681.10 Capsicum annuum HOM05D007128 ORTHO05D009059 1.8e-62 245.0 723 75.8
Sopen02g025900 Solanum pennellii HOM05D007128 ORTHO05D009059 7.0e-62 243.0 723 75.5
PGSC0003DMG400016718 Solanum tuberosum HOM05D007128 ORTHO05D009059 7.0e-62 243.0 723 75.4
Solyc02g081250.3 Solanum lycopersicum HOM05D000189 ORTHO05D009059 9.1e-62 242.7 723 75.5
Gohir.A02G014400 Gossypium hirsutum HOM05D007128 ORTHO05D009059 2.7e-61 241.1 733 76.1
Os04g0488500 Oryza sativa ssp. japonica HOM05D007128 ORTHO05D009059 7.7e-61 239.6 725 72.4
SGA_v2.0_scaffold31G12566 Striga asiatica HOM05D007128 ORTHO05D009059 2.9e-60 237.7 696 76.0
Thecc.04G183700 Theobroma cacao HOM05D007128 ORTHO05D009059 1.5e-59 235.3 686 80.5
Gohir.D02G016000 Gossypium hirsutum HOM05D007128 ORTHO05D009059 3.3e-59 234.2 733 79.3
Gorai.005G019500 Gossypium raimondii HOM05D007128 ORTHO05D009059 3.3e-59 234.2 733 79.3
Actinidia11313 Actinidia chinensis HOM05D007128 ORTHO05D009059 1.0e-57 229.2 734 79.0
DCAR_005541 Daucus carota HOM05D007128 ORTHO05D009059 3.0e-57 227.6 723 66.3
QL10p044765 Quercus lobata HOM05D007128 ORTHO05D009059 1.3e-55 222.2 680 38.5
ECA248G2224 Erigeron canadensis HOM05D007128 ORTHO05D009059 5.0e-52 210.3 726 59.5
Dinv22679 Davidia involucrata HOM05D007128 ORTHO05D009059 1.9e-51 208.4 726 71.2
COL.COLO4_24378 Corchorus olitorius HOM05D007128 ORTHO05D009059 1.2e-50 205.7 709 75.9
Lj6C61T6 Lonicera japonica HOM05D007128 ORTHO05D009059 6.8e-49 199.9 735 42.0
Glyma.01G233900 Glycine max HOM05D007128 ORTHO05D009059 1.2e-48 199.1 380 73.4
AL1G16720 Arabidopsis lyrata HOM05D007128 ORTHO05D009059 4.4e-48 197.2 735 76.2
EL10Ac4g09187 Beta vulgaris HOM05D007128 ORTHO05D009059 1.3e-47 195.7 737 66.9
CDE07G1249 Ceratophyllum demersum HOM05D007128 ORTHO05D009059 1.7e-47 195.3 711 72.7
THA.LOC104826248 Tarenaya hassleriana HOM05D007128 ORTHO05D009059 6.4e-47 193.4 725 77.8
Zm00001eb078990 Zea mays HOM05D007128 ORTHO05D009059 1.1e-46 192.6 726 69.1
Hund13263 Selenicereus undatus HOM05D007128 ORTHO05D000105 3.2e-46 191.0 731 68.3
SHI23551 Sapria himalayana HOM05D007128 ORTHO05D009059 7.0e-46 189.9 723 77.2
Nitab4.5_0000286g0010 Nicotiana tabacum HOM05D007128 ORTHO05D009059 9.2e-46 189.5 566 75.8
Cpa.g.sc71.41 Carica papaya HOM05D007128 ORTHO05D009059 1.7e-44 185.3 143 60.8
QL10p045737 Quercus lobata HOM05D007128 ORTHO05D009059 6.6e-44 183.3 562 65.8
Rhsim02G0073500 Rhododendron simsii HOM05D007128 ORTHO05D009059 3.3e-43 181.0 203 55.2
Gorai.005G019400 Gossypium raimondii HOM05D007128 ORTHO05D009059 8.0e-42 176.4 142 59.2
A10p05290 Brassica napus HOM05D007128 ORTHO05D009059 6.4e-39 166.8 727 68.9
Lsat_1_v5_gn_1_71561 Lactuca sativa HOM05D007128 ORTHO05D009059 6.4e-39 166.8 650 81.4
MSTRG.26768 Avicennia marina HOM05D007128 ORTHO05D009059 1.9e-38 165.2 212 66.0
HPP92_007610 Vanilla planifolia HOM05D007128 ORTHO05D009059 1.9e-38 165.2 735 73.1
C05p04890 Brassica napus HOM05D007128 ORTHO05D009059 3.2e-38 164.5 724 68.9
Carub.0001s0604 Capsella rubella HOM05D007128 ORTHO05D009059 3.5e-37 161.0 154 51.3
CARHR006390 Cardamine hirsuta HOM05D007128 ORTHO05D009059 4.6e-37 160.6 151 51.0
QL10p046885 Quercus lobata HOM05D007128 ORTHO05D009059 4.6e-37 160.6 359 72.1
BraA10t42794Z Brassica rapa HOM05D007128 ORTHO05D009059 3.9e-36 157.5 734 67.7
ATR0743G184 Amborella trichopoda HOM05D007128 ORTHO05D009059 1.1e-35 156.0 212 76.4
Aa31LG1G7750 Aethionema arabicum HOM05D007128 ORTHO05D009059 5.6e-35 153.7 211 77.3
HanXRQChr16g0502661 Helianthus annuus HOM05D007128 ORTHO05D009059 3.6e-34 151.0 212 61.3
AT1G06710 Arabidopsis thaliana HOM05D007128 ORTHO05D009059 2.3e-33 148.3 212 76.4
Gohir.D02G015950 Gossypium hirsutum HOM05D007128 ORTHO05D009059 3.1e-33 147.9 143 52.4
CSS0016083 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 2.6e-32 144.8 664 63.6
Sp1g05440 Schrenkiella parvula HOM05D007128 ORTHO05D009059 5.8e-32 143.7 731 74.0
BcaNung05934 Brassica carinata HOM05D000703 ORTHO05D000633 1.7e-31 142.1 150 46.7
BolC5t29261H Brassica oleracea HOM05D007128 ORTHO05D009059 2.2e-31 141.7 726 67.6
Thhalv10006683m.g Eutrema salsugineum HOM05D007128 ORTHO05D009059 1.4e-30 139.0 212 75.0
AUR62000973 Chenopodium quinoa HOM05D007128 ORTHO05D009059 1.2e-29 136.0 211 65.9
AUR62004993 Chenopodium quinoa HOM05D007128 ORTHO05D009059 2.3e-28 131.7 143 46.2
SEGI_08126 Sequoiadendron giganteum HOM05D007128 ORTHO05D009059 2.8e-26 124.8 211 71.6
QL10p045743 Quercus lobata HOM05D007128 ORTHO05D009059 2.4e-25 121.7 74 74.3
ECA233G6190 Erigeron canadensis HOM05D007145 ORTHO05D008952 5.4e-06 57.4 106 34.9


User provided reference genes

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