Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 1.1e-170 603.2 301 100.0
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 1.1e-146 523.5 302 87.7
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 1.4e-133 479.9 286 85.0
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 2.4e-133 479.2 303 81.2
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.2e-73 280.8 301 53.2
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 2.0e-71 273.5 295 52.2
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 5.4e-69 265.4 276 51.4
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.7e-60 236.5 328 45.4
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.7e-60 236.5 328 45.4
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 8.6e-59 231.5 311 46.3
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 1.1e-58 231.1 276 47.8
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 3.3e-50 203.0 275 42.2
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 3.3e-50 203.0 275 42.2
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 7.5e-47 191.8 283 39.9
Ah.13g070220 Amaranthus hybridus HOM05D008909 ORTHO05D008474 7.3e-34 148.7 280 38.2
AUR62027670 Chenopodium quinoa HOM05D008909 ORTHO05D008474 7.3e-34 148.7 222 38.7
Ah.13g070230 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.8e-33 146.7 281 38.1
Ah.13g070250 Amaranthus hybridus HOM05D008909 ORTHO05D008474 4.0e-32 142.9 281 39.1
Ah.13g070240 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.2e-30 137.1 281 38.1
EL10Ac9g22767 Beta vulgaris HOM05D000027 ORTHO05D000066 3.5e-28 129.8 255 34.5
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.3e-26 123.2 263 33.8
DCAR_028983 Daucus carota HOM05D008909 ORTHO05D008474 3.3e-26 123.2 260 33.5
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.1e-24 118.2 262 32.4
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 3.4e-23 113.2 290 30.3
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 8.4e-22 108.6 262 33.6
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 1.9e-21 107.5 216 34.3
AUR62040175 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.2e-21 106.7 127 48.8
AUR62040180 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.2e-21 106.7 127 48.8
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 2.7e-20 103.6 262 31.7
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 2.7e-20 103.6 303 32.7
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 6.0e-20 102.4 246 29.7
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 6.0e-20 102.4 255 34.1
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 1.8e-19 100.9 273 32.6
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 3.7e-17 93.2 284 27.8
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 4.8e-17 92.8 284 27.8
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 6.2e-17 92.4 284 27.8
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 1.4e-16 91.3 190 32.6
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 1.4e-16 91.3 272 27.6
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 1.8e-16 90.9 276 27.5
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 2.4e-16 90.5 265 27.2
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 4.0e-16 89.7 252 28.6
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.0e-15 87.4 247 27.9
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 2.0e-15 87.4 224 29.0
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 3.4e-15 86.7 274 27.7
Ah.01g011860 Amaranthus hybridus HOM05D008909 ORTHO05D008474 4.5e-15 86.3 222 28.8
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.5e-15 86.3 257 24.5
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 4.5e-15 86.3 262 25.6
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 5.8e-15 85.9 264 28.0
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 9.9e-15 85.1 264 28.4
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 1.3e-14 84.7 244 27.9
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 1.3e-14 84.7 224 29.0
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 2.2e-14 84.0 259 25.1
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 4.9e-14 82.8 221 27.1
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 6.4e-14 82.4 266 27.1
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 8.4e-14 82.0 238 28.2
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 3.2e-13 80.1 213 26.3
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 5.5e-13 79.3 190 30.5
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 9.3e-13 78.6 235 27.2
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 1.2e-12 78.2 243 27.2
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 4.6e-12 76.3 190 30.5
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 7.9e-12 75.5 194 31.4
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.0e-11 75.1 235 26.4
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 1.8e-11 74.3 285 24.9
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 1.8e-11 74.3 236 25.8
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 3.9e-11 73.2 220 27.7
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.1e-10 71.6 218 26.1
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 3.3e-10 70.1 219 28.3
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 3.3e-10 70.1 212 27.4
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 4.3e-10 69.7 225 27.1
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 9.6e-10 68.6 249 24.5
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 9.6e-10 68.6 263 25.5
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.8e-09 67.0 244 23.0
Ah.10g031100 Amaranthus hybridus HOM05D008909 ORTHO05D008474 3.7e-09 66.6 199 30.2
AUR62015055 Chenopodium quinoa HOM05D008909 ORTHO05D008474 8.2e-09 65.5 63 46.0
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 8.2e-09 65.5 223 23.8
Ah.15g098420 Amaranthus hybridus HOM05D008909 ORTHO05D008474 1.4e-08 64.7 217 27.6
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 1.8e-08 64.3 146 28.8
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 5.3e-08 62.8 215 24.2
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 6.9e-08 62.4 185 27.6
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 2.6e-07 60.5 233 21.9
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 5.8e-07 59.3 202 26.2
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 2.9e-06 57.0 235 25.5
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 3.8e-06 56.6 244 22.1
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 6.5e-06 55.8 261 22.6


User provided reference genes

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