Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.6e-208 729.2 368 100.0
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.4e-164 583.2 439 70.4
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.4e-159 565.8 366 79.8
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 3.9e-154 548.5 361 73.7
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.1e-153 547.0 428 68.7
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.2e-152 543.5 361 73.1
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 8.1e-152 540.8 359 73.3
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.4e-151 540.0 361 74.0
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.8e-151 539.7 361 73.4
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 9.0e-151 537.3 364 72.5
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 5.8e-150 534.6 361 74.2
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 3.8e-149 531.9 361 72.6
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 4.9e-149 531.6 361 72.6
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 8.4e-149 530.8 361 72.9
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 1.2e-147 526.9 362 71.8
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 1.6e-147 526.6 359 71.6
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 3.5e-147 525.4 362 71.0
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 4.6e-147 525.0 362 71.0
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 6.0e-147 524.6 362 71.5
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 7.8e-147 524.2 361 71.7
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 7.8e-147 524.2 366 70.5
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.7e-146 523.1 364 70.6
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 2.3e-146 522.7 361 71.2
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 6.6e-146 521.2 362 70.7
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 8.7e-146 520.8 362 72.1
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 1.9e-145 519.6 362 70.7
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 7.3e-145 517.7 365 71.0
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 7.3e-145 517.7 365 71.0
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 7.3e-145 517.7 366 69.7
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 9.6e-145 517.3 363 70.8
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.4e-143 513.5 361 68.7
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 5.3e-143 511.5 366 69.4
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 5.3e-143 511.5 364 69.2
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 5.3e-143 511.5 361 69.5
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.5e-142 510.0 362 68.8
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 2.0e-142 509.6 362 69.3
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-142 508.8 366 69.9
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 3.4e-142 508.8 357 72.0
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 7.6e-142 507.7 363 70.2
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 9.9e-142 507.3 351 70.4
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 2.2e-141 506.1 361 69.8
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 2.9e-141 505.8 361 69.5
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 3.8e-141 505.4 363 68.0
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 6.4e-141 504.6 363 68.6
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.1e-140 503.8 381 67.5
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.4e-140 503.4 362 68.0
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.9e-140 503.1 372 68.0
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 2.4e-140 502.7 369 69.1
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 2.4e-140 502.7 348 70.7
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 3.2e-140 502.3 347 71.8
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 7.1e-140 501.1 366 67.5
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 9.3e-140 500.7 365 67.9
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 2.1e-139 499.6 355 69.9
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 2.7e-139 499.2 354 68.9
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.0e-138 497.3 364 68.1
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.8e-138 496.5 355 69.3
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 3.9e-138 495.4 359 69.4
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.1e-137 493.8 355 69.0
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.5e-137 492.7 355 68.2
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.5e-137 492.7 328 75.0
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 2.5e-137 492.7 359 68.5
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 3.3e-137 492.3 359 68.5
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 2.1e-136 489.6 369 68.6
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 4.8e-136 488.4 364 65.9
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 8.1e-136 487.6 354 66.9
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 2.4e-135 486.1 366 65.6
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 3.1e-135 485.7 355 67.3
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 1.2e-134 483.8 355 65.9
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.0e-134 483.0 355 65.9
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 2.0e-134 483.0 356 66.9
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 2.6e-134 482.6 364 65.4
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.6e-134 482.6 359 68.0
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 3.4e-134 482.3 355 67.0
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 7.6e-134 481.1 362 66.9
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.7e-133 479.9 361 67.6
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 2.2e-133 479.6 370 65.4
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.9e-133 478.4 363 64.2
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 6.4e-133 478.0 355 65.4
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 6.4e-133 478.0 362 64.9
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 8.4e-133 477.6 355 65.4
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.9e-132 476.5 330 71.2
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 3.2e-132 475.7 338 70.1
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 7.1e-132 474.6 339 68.7
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.7e-131 472.6 312 74.4
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.8e-130 469.9 355 64.8
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 5.1e-130 468.4 355 66.2
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 8.7e-130 467.6 339 69.0
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 4.3e-129 465.3 364 64.8
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 7.4e-129 464.5 377 61.8
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 2.1e-128 463.0 365 64.7
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.2e-128 461.1 367 65.4
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.1e-127 460.7 406 59.9
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 1.4e-127 460.3 365 62.7
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.0e-126 456.4 368 61.7
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.3e-125 453.8 364 63.7
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 6.5e-125 451.4 354 62.4
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 8.4e-125 451.1 325 67.7
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.5e-124 449.5 366 60.9
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 3.3e-121 439.1 291 76.3
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 9.7e-121 437.6 310 69.0
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 4.5e-118 428.7 333 68.8
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.3e-117 427.2 287 72.8
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 7.2e-116 421.4 293 71.7
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 6.7e-114 414.8 276 73.2
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 3.1e-111 406.0 274 74.1
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 7.7e-110 401.4 304 64.8
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 8.8e-106 387.9 351 57.8
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.4e-103 379.8 366 54.4
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.5e-102 377.1 303 66.3
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 3.4e-102 375.9 357 54.6
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 9.1e-95 351.3 258 67.1
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 4.2e-92 342.4 273 61.9
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 7.2e-92 341.7 268 63.1
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 7.0e-87 325.1 359 49.0
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 5.2e-82 308.9 315 51.1
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.8e-74 283.9 452 40.0
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-66 257.7 361 45.2
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 2.8e-59 233.4 357 41.2
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-55 220.7 361 39.1
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 3.2e-55 219.9 179 64.8
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-53 214.5 271 47.6
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 4.4e-49 199.5 240 49.2
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-48 197.6 210 53.8
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 3.5e-46 189.9 180 58.9
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.0e-45 186.8 180 57.8
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 2.6e-41 173.7 244 44.7
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.4e-34 150.6 112 65.2
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.3e-24 118.2 121 52.9
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-21 108.6 204 37.3
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 3.2e-15 87.0 61 65.6
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 6.0e-14 82.8 68 55.9
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 7.9e-14 82.4 49 75.5
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 9.6e-12 75.5 196 30.1
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 3.8e-08 63.5 83 44.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 9.3e-07 58.9 35 80.0


User provided reference genes

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