Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 1.4e-122 443.0 228 100.0
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 3.2e-98 362.1 230 80.4
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 7.6e-92 340.9 222 77.0
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 3.8e-83 312.0 232 68.1
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 4.9e-83 311.6 215 71.2
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 6.5e-83 311.2 213 71.8
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 4.2e-82 308.5 232 67.2
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 5.5e-82 308.1 216 71.8
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 4.6e-81 305.1 216 71.8
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 1.3e-80 303.5 216 70.4
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 1.5e-79 300.1 217 73.3
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 3.3e-79 298.9 220 65.9
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 9.7e-79 297.4 213 69.5
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.3e-78 297.0 214 69.6
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.3e-78 297.0 215 68.8
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 1.3e-78 297.0 212 68.4
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 2.8e-78 295.8 226 69.0
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.7e-78 295.4 220 68.2
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.7e-78 295.4 217 65.9
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 3.7e-78 295.4 215 68.4
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 6.3e-78 294.7 213 69.0
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 1.1e-77 293.9 213 69.0
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.8e-77 293.1 217 67.7
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 1.8e-77 293.1 214 68.2
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 2.4e-77 292.7 221 67.0
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 2.4e-77 292.7 216 69.4
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 4.1e-77 292.0 213 68.1
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 5.3e-77 291.6 213 68.1
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 5.3e-77 291.6 213 68.5
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 9.0e-77 290.8 230 66.1
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 1.5e-76 290.0 281 55.5
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 2.6e-76 289.3 221 66.1
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 4.5e-76 288.5 219 64.8
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 7.7e-76 287.7 213 65.7
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 2.2e-75 286.2 213 67.6
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 2.2e-75 286.2 213 68.5
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 3.8e-75 285.4 231 63.2
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 3.8e-75 285.4 221 65.6
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 5.0e-75 285.0 228 64.0
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 6.5e-75 284.6 209 67.0
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 8.5e-75 284.3 221 62.4
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 1.1e-74 283.9 215 63.7
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.4e-74 283.5 213 66.7
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 1.9e-74 283.1 213 69.0
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 1.9e-74 283.1 213 66.2
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.9e-74 283.1 215 65.6
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 2.5e-74 282.7 213 67.1
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 3.2e-74 282.3 226 62.4
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 4.2e-74 282.0 215 66.0
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 7.2e-74 281.2 215 64.2
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 9.4e-74 280.8 215 65.1
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 1.6e-73 280.0 223 63.7
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.6e-73 280.0 213 65.7
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.6e-73 280.0 229 59.0
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 1.6e-73 280.0 213 66.7
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 2.1e-73 279.6 215 63.7
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 2.1e-73 279.6 213 66.2
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 3.6e-73 278.9 228 61.0
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 6.1e-73 278.1 213 64.8
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 7.9e-73 277.7 269 59.1
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 1.0e-72 277.3 213 62.9
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 1.0e-72 277.3 213 65.3
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 1.4e-72 276.9 213 64.8
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.4e-72 276.9 213 65.3
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 1.4e-72 276.9 214 65.0
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.9e-72 275.4 215 64.2
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 6.7e-72 274.6 226 60.2
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.1e-71 273.9 219 58.9
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.1e-71 273.9 213 62.4
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 1.5e-71 273.5 213 61.5
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 2.0e-71 273.1 221 63.3
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 3.3e-71 272.3 213 62.0
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 4.8e-70 268.5 213 61.0
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 6.3e-70 268.1 213 61.0
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 6.3e-70 268.1 215 61.4
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 6.3e-70 268.1 215 62.8
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 8.2e-70 267.7 224 62.1
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 9.1e-69 264.2 214 63.6
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.5e-68 263.5 213 59.2
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 3.4e-68 262.3 220 62.3
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 4.5e-68 261.9 220 60.5
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 4.5e-68 261.9 213 59.6
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 8.5e-67 257.7 220 61.8
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 8.5e-67 257.7 220 61.4
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 5.5e-66 255.0 214 62.1
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 5.5e-66 255.0 221 61.1
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 5.5e-66 255.0 221 61.1
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 5.5e-66 255.0 221 61.1
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 5.5e-66 255.0 221 61.1
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 9.4e-66 254.2 215 62.3
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.2e-65 253.8 215 61.9
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 2.7e-65 252.7 221 58.4
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 2.7e-65 252.7 214 61.7
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 2.3e-64 249.6 220 59.5
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.5e-63 246.9 208 60.6
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 2.8e-62 242.7 193 61.7
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 4.8e-62 241.9 215 59.1
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 1.5e-58 230.3 214 56.1
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.9e-58 229.9 212 59.4
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 4.2e-58 228.8 212 52.8
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 1.0e-56 224.2 220 52.3
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 1.3e-54 217.2 159 67.9
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 2.4e-53 213.0 142 78.2
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 9.1e-53 211.1 146 69.2
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 7.7e-52 208.0 213 50.2
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 4.2e-50 202.2 146 66.4
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.4e-47 192.2 146 66.4
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 3.1e-45 186.0 140 63.6
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.4e-39 166.0 212 45.3
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 8.3e-38 161.4 114 67.5
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 1.8e-37 160.2 111 66.7
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 3.7e-30 136.0 191 44.0
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.4e-16 90.9 181 37.6
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 7.8e-12 75.1 102 40.2
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 2.2e-06 57.0 195 28.7


User provided reference genes

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