Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 1.8e-165 585.9 299 100.0
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 6.4e-147 524.2 299 89.0
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 1.3e-139 500.0 296 85.1
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 4.7e-126 454.9 300 77.0
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 5.1e-120 434.9 291 74.6
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.3e-118 430.3 297 72.1
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.1e-118 429.5 297 73.1
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.8e-118 429.1 297 73.1
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.1e-117 427.2 279 75.3
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.2e-116 423.7 284 73.9
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 1.5e-116 423.3 302 70.9
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 3.4e-116 422.2 297 72.4
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.4e-116 422.2 284 73.2
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.3e-115 420.2 297 72.1
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.3e-115 420.2 297 71.4
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.9e-115 419.1 297 70.7
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.9e-115 419.1 297 70.7
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 3.8e-115 418.7 297 70.4
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 4.9e-115 418.3 297 71.0
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 8.4e-115 417.5 305 69.2
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 1.1e-114 417.2 306 69.6
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.4e-114 416.8 297 71.0
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.9e-114 416.4 298 71.1
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.9e-114 416.4 297 69.4
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 5.4e-114 414.8 296 70.3
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 5.4e-114 414.8 296 70.3
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 7.1e-114 414.5 295 68.8
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 9.3e-114 414.1 309 68.6
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 9.3e-114 414.1 297 72.1
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.6e-113 413.3 296 68.6
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 3.5e-113 412.1 293 72.0
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.5e-113 412.1 305 68.9
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 6.0e-113 411.4 297 70.4
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 7.9e-113 411.0 289 70.9
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.3e-112 410.2 298 69.1
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 1.3e-112 410.2 296 68.2
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.3e-112 409.5 297 69.0
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 3.0e-112 409.1 301 69.1
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 3.9e-112 408.7 297 70.4
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 3.9e-112 408.7 297 71.7
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 5.1e-112 408.3 309 67.3
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 1.1e-111 407.1 299 68.9
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 3.3e-111 405.6 309 67.6
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 5.6e-111 404.8 297 69.0
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 5.6e-111 404.8 296 68.6
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.3e-110 403.7 297 67.7
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 1.6e-110 403.3 297 69.7
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 8.1e-110 401.0 298 69.5
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 2.4e-109 399.4 297 67.3
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 3.1e-109 399.1 298 67.1
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 3.1e-109 399.1 299 67.9
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 4.0e-109 398.7 300 67.0
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 4.0e-109 398.7 298 67.8
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 6.9e-109 397.9 280 70.7
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 9.0e-109 397.5 300 66.7
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.5e-108 396.7 296 68.2
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 2.0e-108 396.4 296 67.2
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 3.4e-108 395.6 318 65.4
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 3.4e-108 395.6 281 71.2
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 5.8e-108 394.8 297 67.0
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 7.6e-108 394.4 315 64.4
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 9.9e-108 394.0 281 70.1
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 9.9e-108 394.0 282 69.1
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 9.9e-108 394.0 281 70.1
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 4.9e-107 391.7 297 67.3
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 8.4e-107 391.0 300 71.0
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 8.4e-107 391.0 282 70.6
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.9e-106 389.8 299 67.2
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.9e-106 389.8 299 67.2
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 3.2e-106 389.0 298 67.4
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 7.1e-106 387.9 297 65.0
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 9.3e-106 387.5 297 67.3
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 1.2e-105 387.1 373 55.0
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.2e-105 387.1 283 69.3
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 2.7e-105 386.0 297 67.7
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.7e-105 386.0 300 70.7
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 7.9e-105 384.4 299 66.6
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.8e-104 383.3 297 64.6
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 3.0e-104 382.5 299 66.9
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 5.1e-104 381.7 302 64.6
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 6.7e-104 381.3 295 67.5
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.5e-103 379.4 297 66.7
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 4.3e-103 378.6 297 66.7
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 7.4e-103 377.9 298 63.8
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 1.3e-102 377.1 297 66.7
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 6.2e-102 374.8 297 65.7
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 3.1e-101 372.5 299 64.2
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 3.1e-101 372.5 299 64.2
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 3.1e-101 372.5 283 68.9
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 4.0e-101 372.1 299 63.5
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 9.0e-101 370.9 299 63.5
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.5e-100 370.2 297 65.7
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.6e-100 369.4 285 66.3
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 5.8e-100 368.2 283 69.3
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 3.8e-99 365.5 300 63.3
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.2e-98 362.1 278 64.4
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 2.1e-97 359.8 294 62.6
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 1.8e-96 356.7 298 64.8
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 4.3e-95 352.1 277 65.7
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.1e-93 347.4 250 70.4
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 9.0e-93 344.4 450 45.6
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.2e-90 335.5 284 58.5
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 7.2e-90 334.7 259 67.6
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.0e-88 330.9 284 57.7
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.4e-85 320.5 263 64.6
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.7e-83 313.5 263 61.6
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 8.5e-83 311.2 207 73.9
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 6.1e-81 305.1 276 60.1
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.0e-80 304.3 289 58.5
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 2.3e-80 303.1 213 72.3
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.1e-79 300.8 195 75.4
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 3.5e-76 289.3 302 52.0
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 1.4e-74 283.9 277 56.3
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 3.2e-74 282.7 278 53.6
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 3.6e-73 279.3 304 51.0
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 1.3e-67 260.8 281 50.9
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 2.9e-67 259.6 267 51.3
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 1.1e-66 257.7 275 51.3
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 4.7e-65 252.3 285 48.4
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 8.8e-64 248.1 258 55.4
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 4.8e-62 242.3 163 72.4
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 2.7e-60 236.5 165 69.7
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 2.2e-59 233.4 281 47.3
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.9e-59 233.0 279 48.7
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 3.6e-57 226.1 165 67.3
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 4.5e-52 209.1 149 72.5
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 2.9e-51 206.5 220 55.5
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 9.5e-50 201.4 205 57.1
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 4.9e-46 189.1 118 80.5
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 6.4e-38 162.2 133 62.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.0e-36 157.1 146 58.2
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.7e-19 100.9 127 43.3
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 8.1e-17 92.0 100 45.0
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 2.3e-11 73.9 246 32.9
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 4.9e-06 56.2 183 31.7
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 6.4e-06 55.8 59 44.1


User provided reference genes

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